RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 PFN2P35080 140 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 DEFB112Q30KQ8 113 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 Q6ZSN1 163 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 A0A1W2PRX2 142 aa6.62□□□□□ -1.35
COPB1-202ENST00000439561 SPANXDQ9BXN6 97 aa6.62□□□□□ -1.35
COPB1-202ENST00000439561 SPANXCQ9NY87 97 aa6.62□□□□□ -1.35
COPB1-202ENST00000439561 FN1P02751 2386 aaKnown RBP6.62□□□□□ -1.35
COPB1-202ENST00000439561 UBE2D4Q9Y2X8 147 aa6.62□□□□□ -1.35
COPB1-202ENST00000439561 PAX4O43316 350 aa6.61□□□□□ -1.35
COPB1-202ENST00000439561 HIST1H4AP62805 103 aaKnown RBP6.61□□□□□ -1.35
COPB1-202ENST00000439561 Q6Q795 121 aa6.61□□□□□ -1.35
COPB1-202ENST00000439561 NRGNQ92686 78 aa6.61□□□□□ -1.35
COPB1-202ENST00000439561 CENPEQ02224 2701 aa6.61□□□□□ -1.35
COPB1-202ENST00000439561 COX7A2LO14548 114 aa6.61□□□□□ -1.35
COPB1-202ENST00000439561 UCNP55089 124 aa6.61□□□□□ -1.35
COPB1-202ENST00000439561 HERVK_113P63121 156 aa6.61□□□□□ -1.35
COPB1-202ENST00000439561 RPL36AP83881 106 aaKnown RBP6.61□□□□□ -1.35
COPB1-202ENST00000439561 RPL36ALQ969Q0 106 aaKnown RBP6.61□□□□□ -1.35
COPB1-202ENST00000439561 TRGV2A0A075B6R0 118 aa6.61□□□□□ -1.35
COPB1-202ENST00000439561 KLK5Q9Y337 293 aaPredicted RBP6.61□□□□□ -1.35
COPB1-202ENST00000439561 PYGO1Q9Y3Y4 419 aa6.61□□□□□ -1.35
COPB1-202ENST00000439561 MYO18BQ8IUG5 2567 aa6.6□□□□□ -1.35
COPB1-202ENST00000439561 COX6A2Q02221 97 aa6.6□□□□□ -1.35
COPB1-202ENST00000439561 LITAFQ99732 161 aa6.6□□□□□ -1.35
COPB1-202ENST00000439561 ATP5G1P05496 136 aa6.6□□□□□ -1.35
COPB1-202ENST00000439561 INSP01308 110 aa6.6□□□□□ -1.35
COPB1-202ENST00000439561 RBMY1A1P0DJD3 496 aaKnown RBP6.6□□□□□ -1.35
COPB1-202ENST00000439561 RBMY1CP0DJD4 496 aa6.6□□□□□ -1.35
COPB1-202ENST00000439561 RBMY1FQ15415 496 aaKnown RBP6.6□□□□□ -1.35
COPB1-202ENST00000439561 SDIM1Q6ZPB5 146 aa6.6□□□□□ -1.35
COPB1-202ENST00000439561 Q8N2B8 174 aa6.6□□□□□ -1.35
COPB1-202ENST00000439561 NAV2Q8IVL1 2488 aa6.59□□□□□ -1.35
COPB1-202ENST00000439561 B4DSR2 109 aa6.59□□□□□ -1.35
COPB1-202ENST00000439561 INAFM2P0DMQ5 153 aa6.59□□□□□ -1.35
COPB1-202ENST00000439561 LINC00643Q86TS7 51 aa6.59□□□□□ -1.35
COPB1-202ENST00000439561 STHQ8IWL8 128 aa6.59□□□□□ -1.35
COPB1-202ENST00000439561 C14orf132Q9NPU4 83 aa6.59□□□□□ -1.35
COPB1-202ENST00000439561 HRNRQ86YZ3 2850 aaPredicted RBP6.59□□□□□ -1.35
COPB1-202ENST00000439561 M0QXV9 152 aa6.59□□□□□ -1.35
COPB1-202ENST00000439561 AVPP01185 164 aa6.59□□□□□ -1.35
COPB1-202ENST00000439561 IGLV1-40P01703 118 aa6.59□□□□□ -1.35
COPB1-202ENST00000439561 ACYP1P07311 99 aa6.59□□□□□ -1.35
COPB1-202ENST00000439561 CHCHD7Q9BUK0 85 aa6.59□□□□□ -1.35
COPB1-202ENST00000439561 CELSR1Q9NYQ6 3014 aa6.59□□□□□ -1.35
COPB1-202ENST00000439561 NDUFA1O15239 70 aa6.58□□□□□ -1.36
COPB1-202ENST00000439561 LINC00694P0DN24 101 aa6.58□□□□□ -1.36
COPB1-202ENST00000439561 TMEM126AQ9H061 195 aa6.58□□□□□ -1.36
COPB1-202ENST00000439561 PPDPFQ9H3Y8 114 aa6.58□□□□□ -1.36
COPB1-202ENST00000439561 TIRAPP58753 221 aa6.58□□□□□ -1.36
COPB1-202ENST00000439561 C18orf65Q6ZTR6 163 aa6.58□□□□□ -1.36
COPB1-202ENST00000439561 MIR7-3HGQ8N6C7 128 aa6.58□□□□□ -1.36
COPB1-202ENST00000439561 FAM110AQ9BQ89 295 aa6.58□□□□□ -1.36
COPB1-202ENST00000439561 SND1-IT1Q9HBX3 110 aa6.58□□□□□ -1.36
COPB1-202ENST00000439561 PSMB8P28062 276 aa6.57□□□□□ -1.36
COPB1-202ENST00000439561 CFAP161Q6P656 301 aa6.57□□□□□ -1.36
COPB1-202ENST00000439561 CITED2Q99967 270 aaPredicted RBP6.57□□□□□ -1.36
COPB1-202ENST00000439561 LOC107984640A0A0U1RRK4 108 aa6.57□□□□□ -1.36
COPB1-202ENST00000439561 C10orf105Q8TEF2 133 aa6.57□□□□□ -1.36
COPB1-202ENST00000439561 FAM240AA0A1B0GVK7 77 aa6.57□□□□□ -1.36
COPB1-202ENST00000439561 A0A1B0GX51 115 aa6.57□□□□□ -1.36
COPB1-202ENST00000439561 C5orf38Q86SI9 138 aa6.57□□□□□ -1.36
COPB1-202ENST00000439561 hADV29S1A0JD25 119 aa6.56□□□□□ -1.36
COPB1-202ENST00000439561 LECT2O14960 151 aa6.56□□□□□ -1.36
COPB1-202ENST00000439561 SLPIP03973 132 aa6.56□□□□□ -1.36
COPB1-202ENST00000439561 LINC00242Q5T6M2 205 aa6.56□□□□□ -1.36
COPB1-202ENST00000439561 C3orf22Q8N5N4 141 aa6.56□□□□□ -1.36
COPB1-202ENST00000439561 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.56□□□□□ -1.36
COPB1-202ENST00000439561 PEMTQ9UBM1 199 aa6.56□□□□□ -1.36
COPB1-202ENST00000439561 TRGV4A0A0C4DH28 118 aa6.56□□□□□ -1.36
COPB1-202ENST00000439561 MALP21145 153 aa6.56□□□□□ -1.36
COPB1-202ENST00000439561 KLK9Q2XQG4 91 aa6.56□□□□□ -1.36
COPB1-202ENST00000439561 ABCA2Q9BZC7 2435 aa6.56□□□□□ -1.36
COPB1-202ENST00000439561 TRAV13-2A0A0B4J235 113 aa6.55□□□□□ -1.36
COPB1-202ENST00000439561 NOP10Q9NPE3 64 aaKnown RBP6.55□□□□□ -1.36
COPB1-202ENST00000439561 SOSTDC1Q6X4U4 206 aa6.55□□□□□ -1.36
COPB1-202ENST00000439561 ABCA12Q86UK0 2595 aa6.55□□□□□ -1.36
COPB1-202ENST00000439561 UQCRQO14949 82 aa6.55□□□□□ -1.36
COPB1-202ENST00000439561 RPL35AP18077 110 aaKnown RBP6.55□□□□□ -1.36
COPB1-202ENST00000439561 CLPSL2Q6UWE3 100 aa6.55□□□□□ -1.36
COPB1-202ENST00000439561 TMEM243Q9BU79 118 aa6.55□□□□□ -1.36
COPB1-202ENST00000439561 RBMY1BA6NDE4 496 aaKnown RBP6.54□□□□□ -1.36
COPB1-202ENST00000439561 RBMY1EA6NEQ0 496 aaKnown RBP6.54□□□□□ -1.36
COPB1-202ENST00000439561 RBMY1DP0C7P1 496 aaKnown RBP6.54□□□□□ -1.36
COPB1-202ENST00000439561 C6orf226Q5I0X4 101 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 HIST2H2BCQ6DN03 193 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 Q6ZTI0 123 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 SMCR5Q8TEV8 140 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 A0A087WVE0 104 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 TIMM17BO60830 172 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 FAM218AQ96MZ4 157 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 CUBNO60494 3623 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 TRBV7-7A0A0K0K1E9 115 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 SMIM1B2RUZ4 78 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 NCR3O14931 201 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 TRACP01848 142 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 DNAJC30Q96LL9 226 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 VPREB3Q9UKI3 123 aa6.54□□□□□ -1.36
COPB1-202ENST00000439561 MAP6D1Q9H9H5 199 aa6.53□□□□□ -1.36
COPB1-202ENST00000439561 LRRK2Q5S007 2527 aa6.53□□□□□ -1.36
COPB1-202ENST00000439561 EPG5Q9HCE0 2579 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms