RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 SPANXDQ9BXN6 97 aa9.73□□□□□ -0.85
ACTN1-204ENST00000438964 YAE1D1Q9NRH1 226 aa9.73□□□□□ -0.85
ACTN1-204ENST00000438964 SPANXCQ9NY87 97 aa9.73□□□□□ -0.85
ACTN1-204ENST00000438964 IGKV3OR2-268A0A0C4DH90 116 aa9.73□□□□□ -0.85
ACTN1-204ENST00000438964 BAALC-AS2P0C853 105 aa9.73□□□□□ -0.85
ACTN1-204ENST00000438964 ATP5J2P56134 94 aa9.73□□□□□ -0.85
ACTN1-204ENST00000438964 MYO18BQ8IUG5 2567 aa9.73□□□□□ -0.85
ACTN1-204ENST00000438964 IGHV3OR16-12A0A075B7B8 117 aa9.72□□□□□ -0.85
ACTN1-204ENST00000438964 IGKV3D-7A0A0C4DH55 119 aa9.72□□□□□ -0.85
ACTN1-204ENST00000438964 LINC00308Q8TCZ7 52 aa9.72□□□□□ -0.85
ACTN1-204ENST00000438964 LRRK2Q5S007 2527 aa9.72□□□□□ -0.85
ACTN1-204ENST00000438964 FAM208BQ5VWN6 2430 aa9.72□□□□□ -0.85
ACTN1-204ENST00000438964 CHCHD7Q9BUK0 85 aa9.72□□□□□ -0.85
ACTN1-204ENST00000438964 UBE2D4Q9Y2X8 147 aa9.72□□□□□ -0.85
ACTN1-204ENST00000438964 TRBV7-7A0A0K0K1E9 115 aa9.72□□□□□ -0.85
ACTN1-204ENST00000438964 A0A087WVE0 104 aa9.71□□□□□ -0.85
ACTN1-204ENST00000438964 TIRAPP58753 221 aa9.71□□□□□ -0.85
ACTN1-204ENST00000438964 SNRPD3P62318 126 aaKnown RBP9.71□□□□□ -0.85
ACTN1-204ENST00000438964 hADV29S1A0JD25 119 aa9.71□□□□□ -0.86
ACTN1-204ENST00000438964 DEFB136Q30KP8 78 aa9.71□□□□□ -0.86
ACTN1-204ENST00000438964 CFAP46Q8IYW2 2715 aa9.7□□□□□ -0.86
ACTN1-204ENST00000438964 ABCA12Q86UK0 2595 aa9.7□□□□□ -0.86
ACTN1-204ENST00000438964 IGHV3-53P01767 116 aa9.7□□□□□ -0.86
ACTN1-204ENST00000438964 KLK9Q2XQG4 91 aa9.7□□□□□ -0.86
ACTN1-204ENST00000438964 CACNA1AO00555 2505 aa9.7□□□□□ -0.86
ACTN1-204ENST00000438964 ZFYVE26Q68DK2 2539 aa9.7□□□□□ -0.86
ACTN1-204ENST00000438964 IGHV4-61A0A0C4DH41 118 aa9.69□□□□□ -0.86
ACTN1-204ENST00000438964 PRIMA1Q86XR5 153 aa9.69□□□□□ -0.86
ACTN1-204ENST00000438964 C3orf22Q8N5N4 141 aa9.69□□□□□ -0.86
ACTN1-204ENST00000438964 USMG5Q96IX5 58 aa9.69□□□□□ -0.86
ACTN1-204ENST00000438964 TEX15Q9BXT5 2789 aa9.69□□□□□ -0.86
ACTN1-204ENST00000438964 TINCRA0A1B0GVN0 87 aa9.69□□□□□ -0.86
ACTN1-204ENST00000438964 ACACBO00763 2458 aa9.68□□□□□ -0.86
ACTN1-204ENST00000438964 FAM240AA0A1B0GVK7 77 aa9.68□□□□□ -0.86
ACTN1-204ENST00000438964 ATP5G1P05496 136 aa9.68□□□□□ -0.86
ACTN1-204ENST00000438964 COX7A2LO14548 114 aa9.68□□□□□ -0.86
ACTN1-204ENST00000438964 DEFB131AP59861 70 aa9.68□□□□□ -0.86
ACTN1-204ENST00000438964 KIR2DL5BQ8NHK3 375 aa9.68□□□□□ -0.86
ACTN1-204ENST00000438964 C14orf132Q9NPU4 83 aa9.68□□□□□ -0.86
ACTN1-204ENST00000438964 C22orf24Q9Y442 160 aa9.67□□□□□ -0.86
ACTN1-204ENST00000438964 TOMM7Q9P0U1 55 aa9.67□□□□□ -0.86
ACTN1-204ENST00000438964 CIRBPQ14011 172 aaKnown RBP9.66□□□□□ -0.86
ACTN1-204ENST00000438964 PIMREGQ9BSJ6 248 aa9.66□□□□□ -0.86
ACTN1-204ENST00000438964 CSDC2Q9Y534 153 aaKnown RBP9.66□□□□□ -0.86
ACTN1-204ENST00000438964 CCDC168Q8NDH2 2452 aa9.66□□□□□ -0.86
ACTN1-204ENST00000438964 AVPP01185 164 aa9.66□□□□□ -0.86
ACTN1-204ENST00000438964 SLPIP03973 132 aa9.66□□□□□ -0.86
ACTN1-204ENST00000438964 DEFB121Q5J5C9 76 aa9.66□□□□□ -0.86
ACTN1-204ENST00000438964 MAPK1IP1LQ8NDC0 245 aa9.66□□□□□ -0.86
ACTN1-204ENST00000438964 TMEM126AQ9H061 195 aa9.66□□□□□ -0.86
ACTN1-204ENST00000438964 C18orf65Q6ZTR6 163 aa9.66□□□□□ -0.86
ACTN1-204ENST00000438964 PYGO1Q9Y3Y4 419 aa9.66□□□□□ -0.86
ACTN1-204ENST00000438964 C19orf84I3L1E1 186 aa9.65□□□□□ -0.86
ACTN1-204ENST00000438964 K7EQG2 157 aa9.65□□□□□ -0.86
ACTN1-204ENST00000438964 FAM19A5Q7Z5A7 132 aaPredicted RBP9.65□□□□□ -0.86
ACTN1-204ENST00000438964 SETXQ7Z333 2677 aaKnown RBP9.65□□□□□ -0.86
ACTN1-204ENST00000438964 FBXL19-AS1Q494R0 122 aa9.65□□□□□ -0.86
ACTN1-204ENST00000438964 ANKRD17O75179 2603 aaKnown RBP9.64□□□□□ -0.87
ACTN1-204ENST00000438964 NDUFA1O15239 70 aa9.64□□□□□ -0.87
ACTN1-204ENST00000438964 IGHV4-59P01825 116 aa9.64□□□□□ -0.87
ACTN1-204ENST00000438964 LINC00242Q5T6M2 205 aa9.64□□□□□ -0.87
ACTN1-204ENST00000438964 LINC00643Q86TS7 51 aa9.64□□□□□ -0.87
ACTN1-204ENST00000438964 C11orf68Q9H3H3 251 aaKnown RBP9.64□□□□□ -0.87
ACTN1-204ENST00000438964 RBMY1BA6NDE4 496 aaKnown RBP9.64□□□□□ -0.87
ACTN1-204ENST00000438964 RBMY1EA6NEQ0 496 aaKnown RBP9.64□□□□□ -0.87
ACTN1-204ENST00000438964 RBMY1DP0C7P1 496 aaKnown RBP9.64□□□□□ -0.87
ACTN1-204ENST00000438964 A0A087WYN8 130 aa9.64□□□□□ -0.87
ACTN1-204ENST00000438964 WFDC9Q8NEX5 89 aa9.64□□□□□ -0.87
ACTN1-204ENST00000438964 LINC01600Q96MT4 127 aa9.64□□□□□ -0.87
ACTN1-204ENST00000438964 K7ENP7 123 aa9.63□□□□□ -0.87
ACTN1-204ENST00000438964 IGLV1-40P01703 118 aa9.63□□□□□ -0.87
ACTN1-204ENST00000438964 APCP25054 2843 aa9.63□□□□□ -0.87
ACTN1-204ENST00000438964 UQCRQO14949 82 aa9.63□□□□□ -0.87
ACTN1-204ENST00000438964 UBE2E2Q96LR5 201 aa9.63□□□□□ -0.87
ACTN1-204ENST00000438964 DSCR8Q96T75 97 aa9.63□□□□□ -0.87
ACTN1-204ENST00000438964 GCN1Q92616 2671 aaKnown RBP9.62□□□□□ -0.87
ACTN1-204ENST00000438964 KHDC1LQ5JSQ8 128 aa9.62□□□□□ -0.87
ACTN1-204ENST00000438964 A6NDX4 124 aa9.62□□□□□ -0.87
ACTN1-204ENST00000438964 NCR3O14931 201 aa9.61□□□□□ -0.87
ACTN1-204ENST00000438964 SLURP1P55000 103 aa9.61□□□□□ -0.87
ACTN1-204ENST00000438964 BEAN1Q3B7T3 259 aa9.61□□□□□ -0.87
ACTN1-204ENST00000438964 XCL2Q9UBD3 114 aa9.61□□□□□ -0.87
ACTN1-204ENST00000438964 A0A1B0GX51 115 aa9.61□□□□□ -0.87
ACTN1-204ENST00000438964 SMIM1B2RUZ4 78 aa9.61□□□□□ -0.87
ACTN1-204ENST00000438964 NRGNQ92686 78 aa9.61□□□□□ -0.87
ACTN1-204ENST00000438964 SPANXA1Q9NS26 97 aa9.61□□□□□ -0.87
ACTN1-204ENST00000438964 LY6DQ14210 128 aa9.61□□□□□ -0.87
ACTN1-204ENST00000438964 LINC00526Q96FQ7 95 aa9.61□□□□□ -0.87
ACTN1-204ENST00000438964 LINC00337Q8N6G1 96 aa9.6□□□□□ -0.87
ACTN1-204ENST00000438964 DNAJC30Q96LL9 226 aa9.6□□□□□ -0.87
ACTN1-204ENST00000438964 Q96MF0 132 aa9.6□□□□□ -0.87
ACTN1-204ENST00000438964 DNAL4O96015 105 aa9.6□□□□□ -0.87
ACTN1-204ENST00000438964 MALP21145 153 aa9.59□□□□□ -0.87
ACTN1-204ENST00000438964 PFN2P35080 140 aa9.59□□□□□ -0.87
ACTN1-204ENST00000438964 PEMTQ9UBM1 199 aa9.59□□□□□ -0.87
ACTN1-204ENST00000438964 PIEZO1Q92508 2521 aa9.59□□□□□ -0.87
ACTN1-204ENST00000438964 COX7CP15954 63 aa9.59□□□□□ -0.87
ACTN1-204ENST00000438964 MIR7-3HGQ8N6C7 128 aa9.59□□□□□ -0.87
ACTN1-204ENST00000438964 RNF152Q8N8N0 203 aa9.59□□□□□ -0.87
ACTN1-204ENST00000438964 LINC00846Q9NV44 126 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms