RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SMR3BP02814 79 aaPredicted RBP16.09■□□□□ 0.17
RAPGEF1-206ENST00000438647 TCAPO15273 167 aa16.08■□□□□ 0.16
RAPGEF1-206ENST00000438647 RPL32P62910 135 aaKnown RBP16.08■□□□□ 0.16
RAPGEF1-206ENST00000438647 Q5VSD8 79 aa16.08■□□□□ 0.16
RAPGEF1-206ENST00000438647 GAGE12HA6NDE8 117 aa16.07■□□□□ 0.16
RAPGEF1-206ENST00000438647 D6R8Y8 96 aa16.07■□□□□ 0.16
RAPGEF1-206ENST00000438647 FAM229AH3BQW9 127 aa16.07■□□□□ 0.16
RAPGEF1-206ENST00000438647 TNFRSF6BO95407 300 aa16.07■□□□□ 0.16
RAPGEF1-206ENST00000438647 CHCHD10Q8WYQ3 142 aaPredicted RBP16.07■□□□□ 0.16
RAPGEF1-206ENST00000438647 hDV102S1A0JD36 115 aa16.06■□□□□ 0.16
RAPGEF1-206ENST00000438647 PHOX2AO14813 284 aa16.06■□□□□ 0.16
RAPGEF1-206ENST00000438647 CFAP161Q6P656 301 aa16.06■□□□□ 0.16
RAPGEF1-206ENST00000438647 AP5S1Q9NUS5 200 aa16.06■□□□□ 0.16
RAPGEF1-206ENST00000438647 TMEM18Q96B42 140 aa16.05■□□□□ 0.16
RAPGEF1-206ENST00000438647 CDC42SE2Q9NRR3 84 aa16.05■□□□□ 0.16
RAPGEF1-206ENST00000438647 ORMDL3Q8N138 153 aa16.04■□□□□ 0.16
RAPGEF1-206ENST00000438647 ZNF664Q8N3J9 261 aa16.04■□□□□ 0.16
RAPGEF1-206ENST00000438647 C9orf163Q8N9P6 203 aa16.04■□□□□ 0.16
RAPGEF1-206ENST00000438647 SMIM2Q9BVW6 85 aa16.04■□□□□ 0.16
RAPGEF1-206ENST00000438647 CNBPP62633 177 aaKnown RBP16.03■□□□□ 0.16
RAPGEF1-206ENST00000438647 CSDC2Q9Y534 153 aaKnown RBP16.03■□□□□ 0.16
RAPGEF1-206ENST00000438647 VPS13BQ7Z7G8 4022 aa16.03■□□□□ 0.16
RAPGEF1-206ENST00000438647 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.02■□□□□ 0.16
RAPGEF1-206ENST00000438647 TMEM218A2RU14 115 aa16.02■□□□□ 0.16
RAPGEF1-206ENST00000438647 CHAC1Q9BUX1 264 aa16.02■□□□□ 0.16
RAPGEF1-206ENST00000438647 LINC00959A0A1B0GUT2 108 aa16.01■□□□□ 0.15
RAPGEF1-206ENST00000438647 NPYP01303 97 aa16.01■□□□□ 0.15
RAPGEF1-206ENST00000438647 SS18Q15532 418 aa16.01■□□□□ 0.15
RAPGEF1-206ENST00000438647 TMEM136Q6ZRR5 245 aa16.01■□□□□ 0.15
RAPGEF1-206ENST00000438647 SCXQ7RTU7 201 aa16.01■□□□□ 0.15
RAPGEF1-206ENST00000438647 UBE2D4Q9Y2X8 147 aa16■□□□□ 0.15
RAPGEF1-206ENST00000438647 ADCYAP1P18509 176 aa15.99■□□□□ 0.15
RAPGEF1-206ENST00000438647 XCL1P47992 114 aa15.99■□□□□ 0.15
RAPGEF1-206ENST00000438647 C15orf56Q8N910 161 aa15.99■□□□□ 0.15
RAPGEF1-206ENST00000438647 PRELID3AQ96N28 172 aa15.99■□□□□ 0.15
RAPGEF1-206ENST00000438647 IMMP2LQ96T52 175 aa15.99■□□□□ 0.15
RAPGEF1-206ENST00000438647 CCL25O15444 150 aa15.98■□□□□ 0.15
RAPGEF1-206ENST00000438647 FOXI1Q12951 378 aa15.98■□□□□ 0.15
RAPGEF1-206ENST00000438647 TIMM21Q9BVV7 248 aa15.98■□□□□ 0.15
RAPGEF1-206ENST00000438647 LAMTOR2Q9Y2Q5 125 aa15.98■□□□□ 0.15
RAPGEF1-206ENST00000438647 SEC11CQ9BY50 192 aa15.97■□□□□ 0.15
RAPGEF1-206ENST00000438647 CTDSP1Q9GZU7 261 aa15.97■□□□□ 0.15
RAPGEF1-206ENST00000438647 COMMD7Q86VX2 200 aa15.96■□□□□ 0.15
RAPGEF1-206ENST00000438647 C1orf196B1AJZ1 125 aa15.95■□□□□ 0.14
RAPGEF1-206ENST00000438647 INAFM2P0DMQ5 153 aa15.95■□□□□ 0.14
RAPGEF1-206ENST00000438647 CD164L2Q6UWJ8 174 aa15.95■□□□□ 0.14
RAPGEF1-206ENST00000438647 IGHV3-64A0A075B6Q5 118 aa15.94■□□□□ 0.14
RAPGEF1-206ENST00000438647 RAB5AP20339 215 aa15.94■□□□□ 0.14
RAPGEF1-206ENST00000438647 LINC00528Q8N1L1 170 aa15.94■□□□□ 0.14
RAPGEF1-206ENST00000438647 CIRBP-AS1Q8TBR5 109 aa15.94■□□□□ 0.14
RAPGEF1-206ENST00000438647 GVQW2A0A096LPI5 108 aaPredicted RBP15.93■□□□□ 0.14
RAPGEF1-206ENST00000438647 HIGD2BQ4VC39 106 aa15.93■□□□□ 0.14
RAPGEF1-206ENST00000438647 SDIM1Q6ZPB5 146 aa15.93■□□□□ 0.14
RAPGEF1-206ENST00000438647 SPANXA1Q9NS26 97 aa15.93■□□□□ 0.14
RAPGEF1-206ENST00000438647 IGHV1-58A0A0C4DH39 117 aa15.92■□□□□ 0.14
RAPGEF1-206ENST00000438647 SLPIP03973 132 aa15.92■□□□□ 0.14
RAPGEF1-206ENST00000438647 PLA2G1BP04054 148 aaKnown RBP15.92■□□□□ 0.14
RAPGEF1-206ENST00000438647 Q6ZUT4 128 aa15.92■□□□□ 0.14
RAPGEF1-206ENST00000438647 MAP1LC3AQ9H492 121 aa15.92■□□□□ 0.14
RAPGEF1-206ENST00000438647 TRAV9-1A0A075B6T8 112 aa15.91■□□□□ 0.14
RAPGEF1-206ENST00000438647 RPL39P62891 51 aaKnown RBP15.91■□□□□ 0.14
RAPGEF1-206ENST00000438647 PRSS47A8MTI9 375 aa15.9■□□□□ 0.14
RAPGEF1-206ENST00000438647 RNASE13Q5GAN3 156 aaKnown RBP15.9■□□□□ 0.14
RAPGEF1-206ENST00000438647 TRAV13-1A0A0B4J241 112 aa15.89■□□□□ 0.13
RAPGEF1-206ENST00000438647 S100PP25815 95 aa15.88■□□□□ 0.13
RAPGEF1-206ENST00000438647 SRRM2Q9UQ35 2752 aaKnown RBP15.88■□□□□ 0.13
RAPGEF1-206ENST00000438647 LOC389332A0A1B0GUA5 103 aa15.87■□□□□ 0.13
RAPGEF1-206ENST00000438647 MRPS36P82909 103 aaKnown RBP15.87■□□□□ 0.13
RAPGEF1-206ENST00000438647 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.87■□□□□ 0.13
RAPGEF1-206ENST00000438647 COX7A2LO14548 114 aa15.86■□□□□ 0.13
RAPGEF1-206ENST00000438647 MALP21145 153 aa15.86■□□□□ 0.13
RAPGEF1-206ENST00000438647 IFI27P40305 119 aaPredicted RBP15.86■□□□□ 0.13
RAPGEF1-206ENST00000438647 Q8N8P6 123 aa15.85■□□□□ 0.13
RAPGEF1-206ENST00000438647 ZNF561-AS1K7EIQ3 104 aa15.84■□□□□ 0.13
RAPGEF1-206ENST00000438647 C10orf91Q5T1B1 145 aa15.84■□□□□ 0.13
RAPGEF1-206ENST00000438647 K7EMI3 77 aa15.83■□□□□ 0.12
RAPGEF1-206ENST00000438647 CIRBPQ14011 172 aaKnown RBP15.83■□□□□ 0.12
RAPGEF1-206ENST00000438647 PKIGQ9Y2B9 76 aa15.83■□□□□ 0.12
RAPGEF1-206ENST00000438647 PYGO1Q9Y3Y4 419 aa15.83■□□□□ 0.12
RAPGEF1-206ENST00000438647 RHEBQ15382 184 aa15.82■□□□□ 0.12
RAPGEF1-206ENST00000438647 CARHSP1Q9Y2V2 147 aaKnown RBP15.82■□□□□ 0.12
RAPGEF1-206ENST00000438647 PANO1I0J062 215 aa15.81■□□□□ 0.12
RAPGEF1-206ENST00000438647 ORMDL2Q53FV1 153 aa15.81■□□□□ 0.12
RAPGEF1-206ENST00000438647 DPH3Q96FX2 82 aa15.81■□□□□ 0.12
RAPGEF1-206ENST00000438647 NXT2Q9NPJ8 142 aaKnown RBP15.81■□□□□ 0.12
RAPGEF1-206ENST00000438647 IFITM10A6NMD0 228 aa15.8■□□□□ 0.12
RAPGEF1-206ENST00000438647 APOMO95445 188 aa15.8■□□□□ 0.12
RAPGEF1-206ENST00000438647 COX6A2Q02221 97 aa15.8■□□□□ 0.12
RAPGEF1-206ENST00000438647 FAM104AQ969W3 186 aa15.8■□□□□ 0.12
RAPGEF1-206ENST00000438647 CARD19Q96LW7 228 aa15.8■□□□□ 0.12
RAPGEF1-206ENST00000438647 OPRPNQ99935 248 aaPredicted RBP15.8■□□□□ 0.12
RAPGEF1-206ENST00000438647 CYSLTR1Q9Y271 337 aa15.8■□□□□ 0.12
RAPGEF1-206ENST00000438647 COX19Q49B96 90 aa15.79■□□□□ 0.12
RAPGEF1-206ENST00000438647 C5orf38Q86SI9 138 aa15.78■□□□□ 0.12
RAPGEF1-206ENST00000438647 SPACA4Q8TDM5 124 aa15.78■□□□□ 0.12
RAPGEF1-206ENST00000438647 LINC00526Q96FQ7 95 aa15.78■□□□□ 0.12
RAPGEF1-206ENST00000438647 GNB1LQ9BYB4 327 aa15.78■□□□□ 0.12
RAPGEF1-206ENST00000438647 RPS10P5Q9NQ39 176 aa15.78■□□□□ 0.12
RAPGEF1-206ENST00000438647 CHTF8P0CG12 524 aa15.77■□□□□ 0.12
RAPGEF1-206ENST00000438647 SYCNQ0VAF6 134 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms