RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 RPL37AP61513 92 aaKnown RBP11.93□□□□□ -0.5
UBXN1-203ENST00000436354 SUMO2P61956 95 aaKnown RBP11.93□□□□□ -0.5
UBXN1-203ENST00000436354 PRELID3AQ96N28 172 aa11.93□□□□□ -0.5
UBXN1-203ENST00000436354 TRBV27A0A0K0K1C4 114 aa11.92□□□□□ -0.5
UBXN1-203ENST00000436354 PRSS47A8MTI9 375 aa11.92□□□□□ -0.5
UBXN1-203ENST00000436354 C14orf177Q52M58 125 aa11.92□□□□□ -0.5
UBXN1-203ENST00000436354 TMEM97Q5BJF2 176 aa11.92□□□□□ -0.5
UBXN1-203ENST00000436354 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.92□□□□□ -0.5
UBXN1-203ENST00000436354 UBE2WQ96B02 151 aa11.92□□□□□ -0.5
UBXN1-203ENST00000436354 TRAPPC1Q9Y5R8 145 aa11.92□□□□□ -0.5
UBXN1-203ENST00000436354 FAT3Q8TDW7 4589 aa11.92□□□□□ -0.5
UBXN1-203ENST00000436354 A0A087WX48 190 aa11.91□□□□□ -0.5
UBXN1-203ENST00000436354 CHCHD7Q9BUK0 85 aa11.91□□□□□ -0.5
UBXN1-203ENST00000436354 FABP9Q0Z7S8 132 aa11.9□□□□□ -0.5
UBXN1-203ENST00000436354 KIAA1644Q3SXP7 199 aa11.9□□□□□ -0.5
UBXN1-203ENST00000436354 ALKBH7Q9BT30 221 aaPredicted RBP11.9□□□□□ -0.5
UBXN1-203ENST00000436354 TRBV6-8A0A0A6YYG3 113 aa11.89□□□□□ -0.51
UBXN1-203ENST00000436354 RAB5AP20339 215 aa11.89□□□□□ -0.51
UBXN1-203ENST00000436354 Q0VG73 95 aa11.89□□□□□ -0.51
UBXN1-203ENST00000436354 NTM-AS1Q6ZSK4 140 aa11.89□□□□□ -0.51
UBXN1-203ENST00000436354 SMIM2Q9BVW6 85 aa11.89□□□□□ -0.51
UBXN1-203ENST00000436354 I3L3M4 83 aa11.88□□□□□ -0.51
UBXN1-203ENST00000436354 VCYO14598 125 aa11.88□□□□□ -0.51
UBXN1-203ENST00000436354 COTL1Q14019 142 aa11.88□□□□□ -0.51
UBXN1-203ENST00000436354 IQCJQ1A5X6 159 aa11.88□□□□□ -0.51
UBXN1-203ENST00000436354 TSHBP01222 138 aa11.87□□□□□ -0.51
UBXN1-203ENST00000436354 HNRNPA3P51991 378 aaKnown RBP11.87□□□□□ -0.51
UBXN1-203ENST00000436354 C1orf43Q9BWL3 253 aa11.87□□□□□ -0.51
UBXN1-203ENST00000436354 MAP1LC3AQ9H492 121 aa11.87□□□□□ -0.51
UBXN1-203ENST00000436354 PMCHP20382 165 aa11.86□□□□□ -0.51
UBXN1-203ENST00000436354 TRBV25-1A0A075B6N4 114 aa11.85□□□□□ -0.51
UBXN1-203ENST00000436354 IGHV1-24A0A0C4DH33 117 aa11.85□□□□□ -0.51
UBXN1-203ENST00000436354 TCAPO15273 167 aa11.84□□□□□ -0.51
UBXN1-203ENST00000436354 KIR2DL4Q99706 377 aa11.84□□□□□ -0.51
UBXN1-203ENST00000436354 TRGC2P03986 189 aa11.83□□□□□ -0.52
UBXN1-203ENST00000436354 ESDP10768 282 aa11.83□□□□□ -0.52
UBXN1-203ENST00000436354 Q8N8P6 123 aa11.83□□□□□ -0.52
UBXN1-203ENST00000436354 NXT2Q9NPJ8 142 aaKnown RBP11.83□□□□□ -0.52
UBXN1-203ENST00000436354 K7EMI3 77 aa11.82□□□□□ -0.52
UBXN1-203ENST00000436354 CRPP02741 224 aa11.82□□□□□ -0.52
UBXN1-203ENST00000436354 MT1HL1P0DM35 61 aa11.82□□□□□ -0.52
UBXN1-203ENST00000436354 AMTP48728 403 aa11.82□□□□□ -0.52
UBXN1-203ENST00000436354 DGAT2L7PQ6IED9 249 aa11.82□□□□□ -0.52
UBXN1-203ENST00000436354 ENHOQ6UWT2 76 aa11.82□□□□□ -0.52
UBXN1-203ENST00000436354 TMEM243Q9BU79 118 aa11.82□□□□□ -0.52
UBXN1-203ENST00000436354 LINC01546A6NGU7 62 aa11.81□□□□□ -0.52
UBXN1-203ENST00000436354 USP17L23D6RBM5 183 aa11.81□□□□□ -0.52
UBXN1-203ENST00000436354 TMEM262E9PQX1 116 aa11.81□□□□□ -0.52
UBXN1-203ENST00000436354 PKIAP61925 76 aa11.81□□□□□ -0.52
UBXN1-203ENST00000436354 C18orf32Q8TCD1 76 aa11.81□□□□□ -0.52
UBXN1-203ENST00000436354 PKHD1L1Q86WI1 4243 aa11.81□□□□□ -0.52
UBXN1-203ENST00000436354 LOC389332A0A1B0GUA5 103 aa11.8□□□□□ -0.52
UBXN1-203ENST00000436354 H7C423 109 aa11.8□□□□□ -0.52
UBXN1-203ENST00000436354 IFI27P40305 119 aaPredicted RBP11.8□□□□□ -0.52
UBXN1-203ENST00000436354 Q6ZRU5 148 aa11.8□□□□□ -0.52
UBXN1-203ENST00000436354 C9orf163Q8N9P6 203 aa11.8□□□□□ -0.52
UBXN1-203ENST00000436354 FCER1GP30273 86 aa11.79□□□□□ -0.52
UBXN1-203ENST00000436354 PRSS1P07477 247 aa11.78□□□□□ -0.52
UBXN1-203ENST00000436354 CHCHD5Q9BSY4 110 aa11.78□□□□□ -0.52
UBXN1-203ENST00000436354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.78□□□□□ -0.52
UBXN1-203ENST00000436354 ANGP03950 147 aaKnown RBP11.77□□□□□ -0.53
UBXN1-203ENST00000436354 MIAQ16674 131 aa11.77□□□□□ -0.53
UBXN1-203ENST00000436354 A0A1B0GUV1 79 aa11.76□□□□□ -0.53
UBXN1-203ENST00000436354 ORMDL2Q53FV1 153 aa11.76□□□□□ -0.53
UBXN1-203ENST00000436354 MPV17L2Q567V2 206 aa11.76□□□□□ -0.53
UBXN1-203ENST00000436354 C20orf203Q8NBC4 194 aa11.76□□□□□ -0.53
UBXN1-203ENST00000436354 PRSS3P2Q8NHM4 247 aa11.76□□□□□ -0.53
UBXN1-203ENST00000436354 URB1-AS1Q96HZ7 61 aa11.76□□□□□ -0.53
UBXN1-203ENST00000436354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.75□□□□□ -0.53
UBXN1-203ENST00000436354 IGKV2-29A2NJV5 120 aaPredicted RBP11.75□□□□□ -0.53
UBXN1-203ENST00000436354 UBE2L6O14933 153 aa11.75□□□□□ -0.53
UBXN1-203ENST00000436354 GAGE6Q13070 117 aa11.75□□□□□ -0.53
UBXN1-203ENST00000436354 MRPL52Q86TS9 123 aaKnown RBP11.75□□□□□ -0.53
UBXN1-203ENST00000436354 SDIM1Q6ZPB5 146 aa11.74□□□□□ -0.53
UBXN1-203ENST00000436354 TMEM18Q96B42 140 aa11.74□□□□□ -0.53
UBXN1-203ENST00000436354 PANO1I0J062 215 aa11.73□□□□□ -0.53
UBXN1-203ENST00000436354 FGF6P10767 208 aa11.73□□□□□ -0.53
UBXN1-203ENST00000436354 ZNF25P17030 456 aaPredicted RBP11.73□□□□□ -0.53
UBXN1-203ENST00000436354 RBX1P62877 108 aa11.73□□□□□ -0.53
UBXN1-203ENST00000436354 FA2HQ7L5A8 372 aa11.73□□□□□ -0.53
UBXN1-203ENST00000436354 TIMM21Q9BVV7 248 aa11.73□□□□□ -0.53
UBXN1-203ENST00000436354 CSDC2Q9Y534 153 aaKnown RBP11.73□□□□□ -0.53
UBXN1-203ENST00000436354 LINC00614P0C842 121 aa11.72□□□□□ -0.53
UBXN1-203ENST00000436354 RAB5BP61020 215 aa11.72□□□□□ -0.53
UBXN1-203ENST00000436354 AP5S1Q9NUS5 200 aa11.72□□□□□ -0.53
UBXN1-203ENST00000436354 UBE2D4Q9Y2X8 147 aa11.72□□□□□ -0.53
UBXN1-203ENST00000436354 IGLV4-60A0A075B6I1 120 aa11.71□□□□□ -0.53
UBXN1-203ENST00000436354 HIST1H2BKO60814 126 aa11.71□□□□□ -0.53
UBXN1-203ENST00000436354 HIST1H2BJP06899 126 aa11.71□□□□□ -0.53
UBXN1-203ENST00000436354 HIST1H2BOP23527 126 aa11.71□□□□□ -0.53
UBXN1-203ENST00000436354 HIST1H2BBP33778 126 aa11.71□□□□□ -0.53
UBXN1-203ENST00000436354 HIST1H2BDP58876 126 aa11.71□□□□□ -0.53
UBXN1-203ENST00000436354 HIST1H2BCP62807 126 aa11.71□□□□□ -0.53
UBXN1-203ENST00000436354 RPL39P62891 51 aaKnown RBP11.71□□□□□ -0.53
UBXN1-203ENST00000436354 SMAGPQ0VAQ4 97 aa11.71□□□□□ -0.53
UBXN1-203ENST00000436354 HIST2H2BEQ16778 126 aa11.71□□□□□ -0.53
UBXN1-203ENST00000436354 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.71□□□□□ -0.53
UBXN1-203ENST00000436354 HIST1H2BHQ93079 126 aa11.71□□□□□ -0.53
UBXN1-203ENST00000436354 HIST1H2BNQ99877 126 aa11.71□□□□□ -0.53
UBXN1-203ENST00000436354 HIST1H2BMQ99879 126 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms