RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 AKAP14Q86UN6 197 aa8.3□□□□□ -1.08
LINC00028-201ENST00000435497 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
LINC00028-201ENST00000435497 PSORS1C2Q9UIG4 136 aa8.3□□□□□ -1.08
LINC00028-201ENST00000435497 I3L3M4 83 aa8.29□□□□□ -1.08
LINC00028-201ENST00000435497 ZNF561-AS1K7EIQ3 104 aa8.29□□□□□ -1.08
LINC00028-201ENST00000435497 K7EN84 100 aa8.29□□□□□ -1.08
LINC00028-201ENST00000435497 TSHBP01222 138 aa8.29□□□□□ -1.08
LINC00028-201ENST00000435497 PMCHP20382 165 aa8.29□□□□□ -1.08
LINC00028-201ENST00000435497 CD164L2Q6UWJ8 174 aa8.29□□□□□ -1.08
LINC00028-201ENST00000435497 TMEM101Q96IK0 257 aa8.29□□□□□ -1.08
LINC00028-201ENST00000435497 BTF3L4Q96K17 158 aa8.29□□□□□ -1.08
LINC00028-201ENST00000435497 MUC2Q02817 5179 aa8.29□□□□□ -1.08
LINC00028-201ENST00000435497 IGLV4-69A0A075B6H9 119 aa8.28□□□□□ -1.08
LINC00028-201ENST00000435497 TRBV6-5A0A0K0K1A5 114 aa8.28□□□□□ -1.08
LINC00028-201ENST00000435497 LOC107984640A0A0U1RRK4 108 aa8.28□□□□□ -1.08
LINC00028-201ENST00000435497 TMEM250H0YL14 139 aa8.28□□□□□ -1.08
LINC00028-201ENST00000435497 GATCO43716 136 aaKnown RBP8.28□□□□□ -1.08
LINC00028-201ENST00000435497 CAMPP49913 170 aa8.28□□□□□ -1.08
LINC00028-201ENST00000435497 CEBPGP53567 150 aa8.28□□□□□ -1.08
LINC00028-201ENST00000435497 SS18Q15532 418 aa8.28□□□□□ -1.08
LINC00028-201ENST00000435497 TEX261Q6UWH6 196 aa8.28□□□□□ -1.08
LINC00028-201ENST00000435497 ALKAL2Q6UX46 152 aa8.28□□□□□ -1.08
LINC00028-201ENST00000435497 hCG_2014768A0A024R1R8 64 aa8.27□□□□□ -1.09
LINC00028-201ENST00000435497 A8MWL6 223 aa8.27□□□□□ -1.09
LINC00028-201ENST00000435497 C9orf116Q5BN46 136 aaPredicted RBP8.27□□□□□ -1.09
LINC00028-201ENST00000435497 MRPL52Q86TS9 123 aaKnown RBP8.27□□□□□ -1.09
LINC00028-201ENST00000435497 PRR26Q8N8Z3 221 aa8.27□□□□□ -1.09
LINC00028-201ENST00000435497 NUP35Q8NFH5 326 aa8.27□□□□□ -1.09
LINC00028-201ENST00000435497 TMEM242Q9NWH2 141 aa8.27□□□□□ -1.09
LINC00028-201ENST00000435497 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.26□□□□□ -1.09
LINC00028-201ENST00000435497 PHF5AQ7RTV0 110 aaKnown RBP8.26□□□□□ -1.09
LINC00028-201ENST00000435497 ZNF664Q8N3J9 261 aa8.26□□□□□ -1.09
LINC00028-201ENST00000435497 BORCS7Q96B45 105 aa8.26□□□□□ -1.09
LINC00028-201ENST00000435497 EIF5A2Q9GZV4 153 aaKnown RBP8.26□□□□□ -1.09
LINC00028-201ENST00000435497 MT-ND6P03923 174 aa8.25□□□□□ -1.09
LINC00028-201ENST00000435497 POLR2KP53803 58 aaKnown RBP8.25□□□□□ -1.09
LINC00028-201ENST00000435497 C1orf137Q5JT78 98 aa8.25□□□□□ -1.09
LINC00028-201ENST00000435497 FAM231DQ6ZW35 169 aa8.25□□□□□ -1.09
LINC00028-201ENST00000435497 ISOC2Q96AB3 205 aa8.25□□□□□ -1.09
LINC00028-201ENST00000435497 APOMO95445 188 aa8.24□□□□□ -1.09
LINC00028-201ENST00000435497 MRAP2Q96G30 205 aa8.24□□□□□ -1.09
LINC00028-201ENST00000435497 ST20Q9HBF5 79 aa8.24□□□□□ -1.09
LINC00028-201ENST00000435497 KRTAP11-1Q8IUC1 163 aa8.23□□□□□ -1.09
LINC00028-201ENST00000435497 C2orf48Q96LS8 159 aa8.23□□□□□ -1.09
LINC00028-201ENST00000435497 CAMK2N2Q96S95 79 aa8.23□□□□□ -1.09
LINC00028-201ENST00000435497 OPRPNQ99935 248 aaPredicted RBP8.23□□□□□ -1.09
LINC00028-201ENST00000435497 TRBV27A0A0K0K1C4 114 aa8.22□□□□□ -1.09
LINC00028-201ENST00000435497 C1orf196B1AJZ1 125 aa8.22□□□□□ -1.09
LINC00028-201ENST00000435497 COX7A2LO14548 114 aa8.22□□□□□ -1.09
LINC00028-201ENST00000435497 IGLV7-43P04211 117 aa8.22□□□□□ -1.09
LINC00028-201ENST00000435497 MALP21145 153 aa8.22□□□□□ -1.09
LINC00028-201ENST00000435497 FAM210AQ96ND0 272 aa8.22□□□□□ -1.09
LINC00028-201ENST00000435497 SMIM7Q9BQ49 75 aa8.22□□□□□ -1.09
LINC00028-201ENST00000435497 C7orf77A4D0Y5 90 aa8.21□□□□□ -1.1
LINC00028-201ENST00000435497 ZNF727A8MUV8 499 aa8.21□□□□□ -1.1
LINC00028-201ENST00000435497 RPL18AQ02543 176 aaKnown RBP8.21□□□□□ -1.1
LINC00028-201ENST00000435497 RNASE13Q5GAN3 156 aaKnown RBP8.21□□□□□ -1.1
LINC00028-201ENST00000435497 CT83Q5H943 113 aa8.21□□□□□ -1.1
LINC00028-201ENST00000435497 C5orf38Q86SI9 138 aa8.21□□□□□ -1.1
LINC00028-201ENST00000435497 A0A1B0GUT8 65 aa8.2□□□□□ -1.1
LINC00028-201ENST00000435497 RNF151Q2KHN1 245 aa8.2□□□□□ -1.1
LINC00028-201ENST00000435497 TSKUQ8WUA8 353 aa8.2□□□□□ -1.1
LINC00028-201ENST00000435497 DIRC1Q969H9 104 aa8.2□□□□□ -1.1
LINC00028-201ENST00000435497 HIGD1CA8MV81 97 aa8.19□□□□□ -1.1
LINC00028-201ENST00000435497 H0Y9J4 135 aa8.19□□□□□ -1.1
LINC00028-201ENST00000435497 KRTAP1-4P0C5Y4 121 aa8.19□□□□□ -1.1
LINC00028-201ENST00000435497 RAB4AP20338 218 aa8.19□□□□□ -1.1
LINC00028-201ENST00000435497 LINC01551Q86U37 167 aa8.19□□□□□ -1.1
LINC00028-201ENST00000435497 TMEM191AQ9H0A3 160 aa8.19□□□□□ -1.1
LINC00028-201ENST00000435497 OSTCQ9NRP0 149 aa8.19□□□□□ -1.1
LINC00028-201ENST00000435497 UBE2D4Q9Y2X8 147 aa8.19□□□□□ -1.1
LINC00028-201ENST00000435497 CSDC2Q9Y534 153 aaKnown RBP8.19□□□□□ -1.1
LINC00028-201ENST00000435497 TRAV13-1A0A0B4J241 112 aa8.18□□□□□ -1.1
LINC00028-201ENST00000435497 FAM168BA1KXE4 195 aa8.18□□□□□ -1.1
LINC00028-201ENST00000435497 KRTAP9-2Q9BYQ4 174 aa8.18□□□□□ -1.1
LINC00028-201ENST00000435497 A0A087WZ39 114 aa8.17□□□□□ -1.1
LINC00028-201ENST00000435497 SMKR1H3BMG3 65 aa8.17□□□□□ -1.1
LINC00028-201ENST00000435497 SRP19P09132 144 aaKnown RBP8.17□□□□□ -1.1
LINC00028-201ENST00000435497 SPAG11BQ08648 103 aa8.17□□□□□ -1.1
LINC00028-201ENST00000435497 RIGQ13278 110 aa8.17□□□□□ -1.1
LINC00028-201ENST00000435497 TMEM241Q24JQ0 296 aa8.17□□□□□ -1.1
LINC00028-201ENST00000435497 KRTAP7-1Q8IUC3 87 aa8.17□□□□□ -1.1
LINC00028-201ENST00000435497 AMN1Q8IY45 258 aa8.17□□□□□ -1.1
LINC00028-201ENST00000435497 IGLV1-50A0A075B6I6 118 aa8.16□□□□□ -1.1
LINC00028-201ENST00000435497 VCYO14598 125 aa8.16□□□□□ -1.1
LINC00028-201ENST00000435497 FAM74A3Q4VXF1 159 aa8.16□□□□□ -1.1
LINC00028-201ENST00000435497 C10orf25Q5T742 122 aa8.16□□□□□ -1.1
LINC00028-201ENST00000435497 Q6ZUT4 128 aa8.16□□□□□ -1.1
LINC00028-201ENST00000435497 FAM104AQ969W3 186 aa8.16□□□□□ -1.1
LINC00028-201ENST00000435497 MRPL35Q9NZE8 188 aaKnown RBP8.16□□□□□ -1.1
LINC00028-201ENST00000435497 PPP1R17O96001 155 aa8.15□□□□□ -1.1
LINC00028-201ENST00000435497 NRACQ8N912 160 aa8.15□□□□□ -1.1
LINC00028-201ENST00000435497 FCER1GP30273 86 aa8.14□□□□□ -1.11
LINC00028-201ENST00000435497 PRR4Q16378 134 aa8.14□□□□□ -1.11
LINC00028-201ENST00000435497 OR10D4PQ8NGN7 298 aa8.14□□□□□ -1.11
LINC00028-201ENST00000435497 IGHV3OR16-9A0A0B4J2B5 98 aa8.13□□□□□ -1.11
LINC00028-201ENST00000435497 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
LINC00028-201ENST00000435497 SUMO2P61956 95 aaKnown RBP8.13□□□□□ -1.11
LINC00028-201ENST00000435497 SMAGPQ0VAQ4 97 aa8.13□□□□□ -1.11
LINC00028-201ENST00000435497 UNQ6190/PRO20217Q6UXQ8 127 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms