RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 TMEM18Q96B42 140 aa10.6□□□□□ -0.71
SMPD4-207ENST00000435455 SMIM2Q9BVW6 85 aa10.6□□□□□ -0.71
SMPD4-207ENST00000435455 SEC11CQ9BY50 192 aa10.6□□□□□ -0.71
SMPD4-207ENST00000435455 KRTAP4-5Q9BYR2 181 aa10.6□□□□□ -0.71
SMPD4-207ENST00000435455 PCLOQ9Y6V0 5065 aa10.6□□□□□ -0.71
SMPD4-207ENST00000435455 GAGE12HA6NDE8 117 aa10.59□□□□□ -0.71
SMPD4-207ENST00000435455 LINC01620Q4KN68 170 aa10.59□□□□□ -0.71
SMPD4-207ENST00000435455 TMEM136Q6ZRR5 245 aa10.59□□□□□ -0.71
SMPD4-207ENST00000435455 CHCHD10Q8WYQ3 142 aaPredicted RBP10.59□□□□□ -0.71
SMPD4-207ENST00000435455 IMMP2LQ96T52 175 aa10.59□□□□□ -0.71
SMPD4-207ENST00000435455 CTDSP1Q9GZU7 261 aa10.59□□□□□ -0.71
SMPD4-207ENST00000435455 FAM30AQ9NZY2 134 aa10.59□□□□□ -0.71
SMPD4-207ENST00000435455 NPYP01303 97 aa10.58□□□□□ -0.72
SMPD4-207ENST00000435455 CFAP161Q6P656 301 aa10.58□□□□□ -0.72
SMPD4-207ENST00000435455 PRELID3AQ96N28 172 aa10.58□□□□□ -0.72
SMPD4-207ENST00000435455 CDC42SE2Q9NRR3 84 aa10.58□□□□□ -0.72
SMPD4-207ENST00000435455 CSDC2Q9Y534 153 aaKnown RBP10.58□□□□□ -0.72
SMPD4-207ENST00000435455 ZNF664Q8N3J9 261 aa10.57□□□□□ -0.72
SMPD4-207ENST00000435455 TIMM21Q9BVV7 248 aa10.57□□□□□ -0.72
SMPD4-207ENST00000435455 LAMTOR2Q9Y2Q5 125 aa10.57□□□□□ -0.72
SMPD4-207ENST00000435455 ABCA13Q86UQ4 5058 aa10.57□□□□□ -0.72
SMPD4-207ENST00000435455 LINC00959A0A1B0GUT2 108 aa10.56□□□□□ -0.72
SMPD4-207ENST00000435455 hDV102S1A0JD36 115 aa10.56□□□□□ -0.72
SMPD4-207ENST00000435455 EPM2AB3EWF7 344 aa10.56□□□□□ -0.72
SMPD4-207ENST00000435455 HAMPP81172 84 aa10.56□□□□□ -0.72
SMPD4-207ENST00000435455 AP5S1Q9NUS5 200 aa10.56□□□□□ -0.72
SMPD4-207ENST00000435455 DNAH8Q96JB1 4490 aa10.56□□□□□ -0.72
SMPD4-207ENST00000435455 TRAV9-1A0A075B6T8 112 aa10.55□□□□□ -0.72
SMPD4-207ENST00000435455 CNBPP62633 177 aaKnown RBP10.55□□□□□ -0.72
SMPD4-207ENST00000435455 SS18Q15532 418 aa10.55□□□□□ -0.72
SMPD4-207ENST00000435455 C9orf163Q8N9P6 203 aa10.55□□□□□ -0.72
SMPD4-207ENST00000435455 UBE2D4Q9Y2X8 147 aa10.55□□□□□ -0.72
SMPD4-207ENST00000435455 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-207ENST00000435455 PRSS47A8MTI9 375 aa10.53□□□□□ -0.72
SMPD4-207ENST00000435455 FAM229AH3BQW9 127 aa10.53□□□□□ -0.72
SMPD4-207ENST00000435455 CCL25O15444 150 aa10.53□□□□□ -0.72
SMPD4-207ENST00000435455 SMR3BP02814 79 aaPredicted RBP10.53□□□□□ -0.72
SMPD4-207ENST00000435455 RAB5AP20339 215 aa10.53□□□□□ -0.72
SMPD4-207ENST00000435455 XCL1P47992 114 aa10.53□□□□□ -0.72
SMPD4-207ENST00000435455 FOXI1Q12951 378 aa10.53□□□□□ -0.72
SMPD4-207ENST00000435455 C10orf91Q5T1B1 145 aa10.53□□□□□ -0.72
SMPD4-207ENST00000435455 C15orf56Q8N910 161 aa10.53□□□□□ -0.72
SMPD4-207ENST00000435455 MAP1LC3AQ9H492 121 aa10.53□□□□□ -0.72
SMPD4-207ENST00000435455 C1orf196B1AJZ1 125 aa10.52□□□□□ -0.73
SMPD4-207ENST00000435455 S100PP25815 95 aa10.52□□□□□ -0.73
SMPD4-207ENST00000435455 Q5VSD8 79 aa10.52□□□□□ -0.73
SMPD4-207ENST00000435455 CHAC1Q9BUX1 264 aa10.52□□□□□ -0.73
SMPD4-207ENST00000435455 SPANXA1Q9NS26 97 aa10.52□□□□□ -0.73
SMPD4-207ENST00000435455 SRRM2Q9UQ35 2752 aaKnown RBP10.51□□□□□ -0.73
SMPD4-207ENST00000435455 RPL39P62891 51 aaKnown RBP10.51□□□□□ -0.73
SMPD4-207ENST00000435455 CD164L2Q6UWJ8 174 aa10.51□□□□□ -0.73
SMPD4-207ENST00000435455 Q6ZUT4 128 aa10.51□□□□□ -0.73
SMPD4-207ENST00000435455 CARHSP1Q9Y2V2 147 aaKnown RBP10.51□□□□□ -0.73
SMPD4-207ENST00000435455 RHEBQ15382 184 aa10.5□□□□□ -0.73
SMPD4-207ENST00000435455 FAT1Q14517 4588 aa10.49□□□□□ -0.73
SMPD4-207ENST00000435455 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
SMPD4-207ENST00000435455 GVQW2A0A096LPI5 108 aaPredicted RBP10.49□□□□□ -0.73
SMPD4-207ENST00000435455 IGHV1-58A0A0C4DH39 117 aa10.49□□□□□ -0.73
SMPD4-207ENST00000435455 LOC389332A0A1B0GUA5 103 aa10.49□□□□□ -0.73
SMPD4-207ENST00000435455 RNASE13Q5GAN3 156 aaKnown RBP10.49□□□□□ -0.73
SMPD4-207ENST00000435455 SCXQ7RTU7 201 aa10.49□□□□□ -0.73
SMPD4-207ENST00000435455 VPS13BQ7Z7G8 4022 aa10.49□□□□□ -0.73
SMPD4-207ENST00000435455 TRAV13-1A0A0B4J241 112 aa10.48□□□□□ -0.73
SMPD4-207ENST00000435455 MRPS36P82909 103 aaKnown RBP10.48□□□□□ -0.73
SMPD4-207ENST00000435455 HIGD2BQ4VC39 106 aa10.48□□□□□ -0.73
SMPD4-207ENST00000435455 SDIM1Q6ZPB5 146 aa10.48□□□□□ -0.73
SMPD4-207ENST00000435455 Q8N8P6 123 aa10.48□□□□□ -0.73
SMPD4-207ENST00000435455 SLPIP03973 132 aa10.47□□□□□ -0.73
SMPD4-207ENST00000435455 COX19Q49B96 90 aa10.47□□□□□ -0.73
SMPD4-207ENST00000435455 CIRBP-AS1Q8TBR5 109 aa10.47□□□□□ -0.73
SMPD4-207ENST00000435455 NXT2Q9NPJ8 142 aaKnown RBP10.47□□□□□ -0.73
SMPD4-207ENST00000435455 K7EMI3 77 aa10.46□□□□□ -0.73
SMPD4-207ENST00000435455 COX7A2LO14548 114 aa10.46□□□□□ -0.73
SMPD4-207ENST00000435455 GNB1LQ9BYB4 327 aa10.46□□□□□ -0.73
SMPD4-207ENST00000435455 RPS10P5Q9NQ39 176 aa10.46□□□□□ -0.73
SMPD4-207ENST00000435455 IFI27P40305 119 aaPredicted RBP10.45□□□□□ -0.74
SMPD4-207ENST00000435455 ORMDL2Q53FV1 153 aa10.45□□□□□ -0.74
SMPD4-207ENST00000435455 LINC00528Q8N1L1 170 aa10.45□□□□□ -0.74
SMPD4-207ENST00000435455 PYGO1Q9Y3Y4 419 aa10.45□□□□□ -0.74
SMPD4-207ENST00000435455 MALP21145 153 aa10.44□□□□□ -0.74
SMPD4-207ENST00000435455 NDUFA5Q16718 116 aa10.44□□□□□ -0.74
SMPD4-207ENST00000435455 KIAA1644Q3SXP7 199 aa10.44□□□□□ -0.74
SMPD4-207ENST00000435455 FAM104AQ969W3 186 aa10.44□□□□□ -0.74
SMPD4-207ENST00000435455 CYSLTR1Q9Y271 337 aa10.44□□□□□ -0.74
SMPD4-207ENST00000435455 IFITM10A6NMD0 228 aa10.43□□□□□ -0.74
SMPD4-207ENST00000435455 ZNF561-AS1K7EIQ3 104 aa10.43□□□□□ -0.74
SMPD4-207ENST00000435455 MT-ND6P03923 174 aa10.43□□□□□ -0.74
SMPD4-207ENST00000435455 PLA2G1BP04054 148 aaKnown RBP10.43□□□□□ -0.74
SMPD4-207ENST00000435455 INAFM2P0DMQ5 153 aa10.43□□□□□ -0.74
SMPD4-207ENST00000435455 OPRPNQ99935 248 aaPredicted RBP10.43□□□□□ -0.74
SMPD4-207ENST00000435455 APOC3P02656 99 aa10.42□□□□□ -0.74
SMPD4-207ENST00000435455 G0S2P27469 103 aa10.42□□□□□ -0.74
SMPD4-207ENST00000435455 CIRBPQ14011 172 aaKnown RBP10.42□□□□□ -0.74
SMPD4-207ENST00000435455 C2orf66Q6UXQ4 117 aa10.42□□□□□ -0.74
SMPD4-207ENST00000435455 TMEM141Q96I45 108 aa10.42□□□□□ -0.74
SMPD4-207ENST00000435455 PKIGQ9Y2B9 76 aa10.42□□□□□ -0.74
SMPD4-207ENST00000435455 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.42□□□□□ -0.74
SMPD4-207ENST00000435455 IGLV4-3A0A075B6K6 122 aa10.41□□□□□ -0.74
SMPD4-207ENST00000435455 SNAPINO95295 136 aa10.41□□□□□ -0.74
SMPD4-207ENST00000435455 APOMO95445 188 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms