RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 MT1HL1P0DM35 61 aa12.69□□□□□ -0.38
HLA-B-250ENST00000434333 AMN1Q8IY45 258 aa12.69□□□□□ -0.38
HLA-B-250ENST00000434333 BTF3L4Q96K17 158 aa12.69□□□□□ -0.38
HLA-B-250ENST00000434333 V9GYV3 84 aa12.69□□□□□ -0.38
HLA-B-250ENST00000434333 CCL25O15444 150 aa12.68□□□□□ -0.38
HLA-B-250ENST00000434333 XCL1P47992 114 aa12.68□□□□□ -0.38
HLA-B-250ENST00000434333 Q6ZRU5 148 aa12.68□□□□□ -0.38
HLA-B-250ENST00000434333 MRPL52Q86TS9 123 aaKnown RBP12.68□□□□□ -0.38
HLA-B-250ENST00000434333 MRAP2Q96G30 205 aa12.68□□□□□ -0.38
HLA-B-250ENST00000434333 TMEM101Q96IK0 257 aa12.67□□□□□ -0.38
HLA-B-250ENST00000434333 CDC42SE2Q9NRR3 84 aa12.67□□□□□ -0.38
HLA-B-250ENST00000434333 PHOX2AO14813 284 aa12.66□□□□□ -0.38
HLA-B-250ENST00000434333 NUP35Q8NFH5 326 aa12.66□□□□□ -0.38
HLA-B-250ENST00000434333 IGKV2-24A0A0C4DH68 120 aa12.65□□□□□ -0.38
HLA-B-250ENST00000434333 C7orf77A4D0Y5 90 aa12.65□□□□□ -0.38
HLA-B-250ENST00000434333 SMKR1H3BMG3 65 aa12.65□□□□□ -0.38
HLA-B-250ENST00000434333 MAJINQ3KP22 176 aa12.65□□□□□ -0.38
HLA-B-250ENST00000434333 ISOC2Q96AB3 205 aa12.65□□□□□ -0.38
HLA-B-250ENST00000434333 LINC00526Q96FQ7 95 aa12.65□□□□□ -0.38
HLA-B-250ENST00000434333 UBR4Q5T4S7 5183 aa12.65□□□□□ -0.38
HLA-B-250ENST00000434333 A0A096LNI7 61 aa12.64□□□□□ -0.39
HLA-B-250ENST00000434333 NRACQ8N912 160 aa12.64□□□□□ -0.39
HLA-B-250ENST00000434333 TNXBP22105 4242 aa12.64□□□□□ -0.39
HLA-B-250ENST00000434333 IGHV1-58A0A0C4DH39 117 aa12.63□□□□□ -0.39
HLA-B-250ENST00000434333 RPL23P62829 140 aaKnown RBP12.63□□□□□ -0.39
HLA-B-250ENST00000434333 RIGQ13278 110 aa12.63□□□□□ -0.39
HLA-B-250ENST00000434333 ZNF664Q8N3J9 261 aa12.63□□□□□ -0.39
HLA-B-250ENST00000434333 CD164L2Q6UWJ8 174 aa12.62□□□□□ -0.39
HLA-B-250ENST00000434333 STPG4Q8N801 248 aa12.62□□□□□ -0.39
HLA-B-250ENST00000434333 PLA2G2DQ9UNK4 145 aa12.62□□□□□ -0.39
HLA-B-250ENST00000434333 C9JQL5 133 aa12.61□□□□□ -0.39
HLA-B-250ENST00000434333 VCYO14598 125 aa12.61□□□□□ -0.39
HLA-B-250ENST00000434333 SS18Q15532 418 aa12.61□□□□□ -0.39
HLA-B-250ENST00000434333 TMEM241Q24JQ0 296 aa12.61□□□□□ -0.39
HLA-B-250ENST00000434333 C7orf33Q8WU49 177 aa12.61□□□□□ -0.39
HLA-B-250ENST00000434333 SUMO2P61956 95 aaKnown RBP12.6□□□□□ -0.39
HLA-B-250ENST00000434333 NAT8BQ9UHF3 227 aa12.6□□□□□ -0.39
HLA-B-250ENST00000434333 UBE2D4Q9Y2X8 147 aa12.6□□□□□ -0.39
HLA-B-250ENST00000434333 FAM74A3Q4VXF1 159 aa12.59□□□□□ -0.39
HLA-B-250ENST00000434333 CARD19Q96LW7 228 aa12.59□□□□□ -0.39
HLA-B-250ENST00000434333 CSDC2Q9Y534 153 aaKnown RBP12.59□□□□□ -0.39
HLA-B-250ENST00000434333 SMIM27A0A1W2PRY6 76 aa12.58□□□□□ -0.4
HLA-B-250ENST00000434333 PRR3P79522 188 aaKnown RBP12.58□□□□□ -0.4
HLA-B-250ENST00000434333 MRPL51Q4U2R6 128 aaKnown RBP12.58□□□□□ -0.4
HLA-B-250ENST00000434333 FAM104BQ5XKR9 115 aa12.58□□□□□ -0.4
HLA-B-250ENST00000434333 PPP1R17O96001 155 aa12.57□□□□□ -0.4
HLA-B-250ENST00000434333 FCER1GP30273 86 aa12.57□□□□□ -0.4
HLA-B-250ENST00000434333 SRSF3P84103 164 aaKnown RBP12.57□□□□□ -0.4
HLA-B-250ENST00000434333 ADIRFQ15847 76 aa12.57□□□□□ -0.4
HLA-B-250ENST00000434333 NAT8Q9UHE5 227 aa12.57□□□□□ -0.4
HLA-B-250ENST00000434333 SYCNQ0VAF6 134 aa12.56□□□□□ -0.4
HLA-B-250ENST00000434333 RNASE13Q5GAN3 156 aaKnown RBP12.56□□□□□ -0.4
HLA-B-250ENST00000434333 LINC00474Q9P2X8 69 aa12.56□□□□□ -0.4
HLA-B-250ENST00000434333 ZNF561-AS1K7EIQ3 104 aa12.55□□□□□ -0.4
HLA-B-250ENST00000434333 PPP1R2P9O14990 202 aa12.55□□□□□ -0.4
HLA-B-250ENST00000434333 KIR2DL4Q99706 377 aa12.55□□□□□ -0.4
HLA-B-250ENST00000434333 C1orf196B1AJZ1 125 aa12.54□□□□□ -0.4
HLA-B-250ENST00000434333 CAMPP49913 170 aa12.54□□□□□ -0.4
HLA-B-250ENST00000434333 Q6ZUT4 128 aa12.54□□□□□ -0.4
HLA-B-250ENST00000434333 PKIGQ9Y2B9 76 aa12.54□□□□□ -0.4
HLA-B-250ENST00000434333 IGLV4-69A0A075B6H9 119 aa12.53□□□□□ -0.4
HLA-B-250ENST00000434333 TRBV24-1A0A075B6N3 115 aa12.53□□□□□ -0.4
HLA-B-250ENST00000434333 LINC00862A6NCI5 91 aa12.53□□□□□ -0.4
HLA-B-250ENST00000434333 TIMM21Q9BVV7 248 aa12.53□□□□□ -0.4
HLA-B-250ENST00000434333 COX7A2LO14548 114 aa12.52□□□□□ -0.41
HLA-B-250ENST00000434333 RPL32P62910 135 aaKnown RBP12.52□□□□□ -0.41
HLA-B-250ENST00000434333 FAM104AQ969W3 186 aa12.52□□□□□ -0.41
HLA-B-250ENST00000434333 C20orf78Q9BR46 151 aa12.52□□□□□ -0.41
HLA-B-250ENST00000434333 TRAV13-1A0A0B4J241 112 aa12.51□□□□□ -0.41
HLA-B-250ENST00000434333 PTTG1IPP53801 180 aa12.51□□□□□ -0.41
HLA-B-250ENST00000434333 SMAGPQ0VAQ4 97 aa12.51□□□□□ -0.41
HLA-B-250ENST00000434333 A0A1B0GW15 77 aa12.5□□□□□ -0.41
HLA-B-250ENST00000434333 TNFRSF6BO95407 300 aa12.5□□□□□ -0.41
HLA-B-250ENST00000434333 MALP21145 153 aa12.5□□□□□ -0.41
HLA-B-250ENST00000434333 A0A1B0GXF2 115 aa12.49□□□□□ -0.41
HLA-B-250ENST00000434333 CKS2P33552 79 aa12.49□□□□□ -0.41
HLA-B-250ENST00000434333 RPL39P62891 51 aaKnown RBP12.49□□□□□ -0.41
HLA-B-250ENST00000434333 PEA15Q15121 130 aa12.49□□□□□ -0.41
HLA-B-250ENST00000434333 C5orf38Q86SI9 138 aa12.49□□□□□ -0.41
HLA-B-250ENST00000434333 LINC01600Q96MT4 127 aa12.49□□□□□ -0.41
HLA-B-250ENST00000434333 SMDT1Q9H4I9 107 aa12.49□□□□□ -0.41
HLA-B-250ENST00000434333 LOC107984640A0A0U1RRK4 108 aa12.48□□□□□ -0.41
HLA-B-250ENST00000434333 MRPL54Q6P161 138 aaKnown RBP12.48□□□□□ -0.41
HLA-B-250ENST00000434333 TMEM18Q96B42 140 aa12.48□□□□□ -0.41
HLA-B-250ENST00000434333 SMIM2Q9BVW6 85 aa12.48□□□□□ -0.41
HLA-B-250ENST00000434333 D6R8Y8 96 aa12.47□□□□□ -0.41
HLA-B-250ENST00000434333 NPYP01303 97 aa12.47□□□□□ -0.41
HLA-B-250ENST00000434333 GAGE2BQ13066 116 aa12.47□□□□□ -0.41
HLA-B-250ENST00000434333 C2orf48Q96LS8 159 aa12.47□□□□□ -0.41
HLA-B-250ENST00000434333 CAMK2N2Q96S95 79 aa12.47□□□□□ -0.41
HLA-B-250ENST00000434333 A0A1W2PNN7 141 aa12.46□□□□□ -0.41
HLA-B-250ENST00000434333 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.46□□□□□ -0.41
HLA-B-250ENST00000434333 HBBP68871 147 aa12.46□□□□□ -0.41
HLA-B-250ENST00000434333 SRSF9Q13242 221 aaKnown RBP eCLIP12.46□□□□□ -0.41
HLA-B-250ENST00000434333 LRP2P98164 4655 aa12.46□□□□□ -0.42
HLA-B-250ENST00000434333 TCAPO15273 167 aa12.45□□□□□ -0.42
HLA-B-250ENST00000434333 APOMO95445 188 aa12.45□□□□□ -0.42
HLA-B-250ENST00000434333 SPINK6Q6UWN8 80 aa12.45□□□□□ -0.42
HLA-B-250ENST00000434333 OPRPNQ99935 248 aaPredicted RBP12.45□□□□□ -0.42
HLA-B-250ENST00000434333 SPAG11BQ08648 103 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms