RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 CARD19Q96LW7 228 aa9.45□□□□□ -0.9
CSNK1E-208ENST00000431611 FAM210AQ96ND0 272 aa9.45□□□□□ -0.9
CSNK1E-208ENST00000431611 TMEM242Q9NWH2 141 aa9.45□□□□□ -0.9
CSNK1E-208ENST00000431611 ZNF561-AS1K7EIQ3 104 aa9.44□□□□□ -0.9
CSNK1E-208ENST00000431611 GAS8-AS1O95177 125 aa9.44□□□□□ -0.9
CSNK1E-208ENST00000431611 CT83Q5H943 113 aa9.44□□□□□ -0.9
CSNK1E-208ENST00000431611 SPINK6Q6UWN8 80 aa9.44□□□□□ -0.9
CSNK1E-208ENST00000431611 CDC42SE2Q9NRR3 84 aa9.44□□□□□ -0.9
CSNK1E-208ENST00000431611 A0A0J9YXV3 536 aa9.43□□□□□ -0.9
CSNK1E-208ENST00000431611 SYCNQ0VAF6 134 aa9.43□□□□□ -0.9
CSNK1E-208ENST00000431611 CD164L2Q6UWJ8 174 aa9.43□□□□□ -0.9
CSNK1E-208ENST00000431611 MRPL52Q86TS9 123 aaKnown RBP9.43□□□□□ -0.9
CSNK1E-208ENST00000431611 CEBPGP53567 150 aa9.42□□□□□ -0.9
CSNK1E-208ENST00000431611 POLR2KP53803 58 aaKnown RBP9.42□□□□□ -0.9
CSNK1E-208ENST00000431611 REG3GQ6UW15 175 aa9.42□□□□□ -0.9
CSNK1E-208ENST00000431611 ZNF664Q8N3J9 261 aa9.42□□□□□ -0.9
CSNK1E-208ENST00000431611 TMEM191AQ9H0A3 160 aa9.42□□□□□ -0.9
CSNK1E-208ENST00000431611 A0A1B0GUT8 65 aa9.41□□□□□ -0.9
CSNK1E-208ENST00000431611 C7orf77A4D0Y5 90 aa9.41□□□□□ -0.9
CSNK1E-208ENST00000431611 BLOC1S1P78537 153 aa9.41□□□□□ -0.9
CSNK1E-208ENST00000431611 ODF1Q14990 250 aa9.41□□□□□ -0.9
CSNK1E-208ENST00000431611 Q6ZRP5 223 aa9.41□□□□□ -0.9
CSNK1E-208ENST00000431611 LRP2P98164 4655 aa9.41□□□□□ -0.9
CSNK1E-208ENST00000431611 TRBV27A0A0K0K1C4 114 aa9.4□□□□□ -0.9
CSNK1E-208ENST00000431611 HIGD1CA8MV81 97 aa9.4□□□□□ -0.9
CSNK1E-208ENST00000431611 RAB4AP20338 218 aa9.4□□□□□ -0.9
CSNK1E-208ENST00000431611 CAMPP49913 170 aa9.4□□□□□ -0.9
CSNK1E-208ENST00000431611 KRTAP10-8P60410 259 aa9.4□□□□□ -0.9
CSNK1E-208ENST00000431611 TSKUQ8WUA8 353 aa9.4□□□□□ -0.9
CSNK1E-208ENST00000431611 MALP21145 153 aa9.39□□□□□ -0.91
CSNK1E-208ENST00000431611 SRSF9Q13242 221 aaKnown RBP eCLIP9.39□□□□□ -0.91
CSNK1E-208ENST00000431611 ALKAL2Q6UX46 152 aa9.39□□□□□ -0.91
CSNK1E-208ENST00000431611 AMN1Q8IY45 258 aa9.39□□□□□ -0.91
CSNK1E-208ENST00000431611 ISOC2Q96AB3 205 aa9.39□□□□□ -0.91
CSNK1E-208ENST00000431611 IGLV4-69A0A075B6H9 119 aa9.38□□□□□ -0.91
CSNK1E-208ENST00000431611 LOC107984640A0A0U1RRK4 108 aa9.38□□□□□ -0.91
CSNK1E-208ENST00000431611 C1orf196B1AJZ1 125 aa9.38□□□□□ -0.91
CSNK1E-208ENST00000431611 VCYO14598 125 aa9.38□□□□□ -0.91
CSNK1E-208ENST00000431611 FCER1GP30273 86 aa9.38□□□□□ -0.91
CSNK1E-208ENST00000431611 PTTG1IPP53801 180 aa9.38□□□□□ -0.91
CSNK1E-208ENST00000431611 GAGE2BQ13066 116 aa9.38□□□□□ -0.91
CSNK1E-208ENST00000431611 SMIM7Q9BQ49 75 aa9.38□□□□□ -0.91
CSNK1E-208ENST00000431611 hCG_2014768A0A024R1R8 64 aa9.37□□□□□ -0.91
CSNK1E-208ENST00000431611 COX7A2LO14548 114 aa9.37□□□□□ -0.91
CSNK1E-208ENST00000431611 LINC01551Q86U37 167 aa9.37□□□□□ -0.91
CSNK1E-208ENST00000431611 SMKR1H3BMG3 65 aa9.36□□□□□ -0.91
CSNK1E-208ENST00000431611 SMAGPQ0VAQ4 97 aa9.36□□□□□ -0.91
CSNK1E-208ENST00000431611 CAMK2N2Q96S95 79 aa9.36□□□□□ -0.91
CSNK1E-208ENST00000431611 EIF5A2Q9GZV4 153 aaKnown RBP9.36□□□□□ -0.91
CSNK1E-208ENST00000431611 OSTCQ9NRP0 149 aa9.36□□□□□ -0.91
CSNK1E-208ENST00000431611 CSDC2Q9Y534 153 aaKnown RBP9.36□□□□□ -0.91
CSNK1E-208ENST00000431611 A0A1W2PNN7 141 aa9.35□□□□□ -0.91
CSNK1E-208ENST00000431611 ZNF727A8MUV8 499 aa9.35□□□□□ -0.91
CSNK1E-208ENST00000431611 PPP1R17O96001 155 aa9.35□□□□□ -0.91
CSNK1E-208ENST00000431611 RIGQ13278 110 aa9.35□□□□□ -0.91
CSNK1E-208ENST00000431611 AKAP14Q86UN6 197 aa9.35□□□□□ -0.91
CSNK1E-208ENST00000431611 NUP35Q8NFH5 326 aa9.35□□□□□ -0.91
CSNK1E-208ENST00000431611 UBE2D4Q9Y2X8 147 aa9.35□□□□□ -0.91
CSNK1E-208ENST00000431611 TRAV13-1A0A0B4J241 112 aa9.34□□□□□ -0.91
CSNK1E-208ENST00000431611 SUMO2P61956 95 aaKnown RBP9.34□□□□□ -0.91
CSNK1E-208ENST00000431611 RNASE13Q5GAN3 156 aaKnown RBP9.34□□□□□ -0.91
CSNK1E-208ENST00000431611 KIR2DL4Q99706 377 aa9.34□□□□□ -0.91
CSNK1E-208ENST00000431611 APOMO95445 188 aa9.33□□□□□ -0.92
CSNK1E-208ENST00000431611 C5orf38Q86SI9 138 aa9.33□□□□□ -0.92
CSNK1E-208ENST00000431611 NRACQ8N912 160 aa9.33□□□□□ -0.92
CSNK1E-208ENST00000431611 C2orf48Q96LS8 159 aa9.33□□□□□ -0.92
CSNK1E-208ENST00000431611 RNF213Q63HN8 5207 aa9.33□□□□□ -0.92
CSNK1E-208ENST00000431611 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.32□□□□□ -0.92
CSNK1E-208ENST00000431611 C9orf116Q5BN46 136 aaPredicted RBP9.32□□□□□ -0.92
CSNK1E-208ENST00000431611 V9GYV3 84 aa9.32□□□□□ -0.92
CSNK1E-208ENST00000431611 PPP1R2P9O14990 202 aa9.31□□□□□ -0.92
CSNK1E-208ENST00000431611 SRP19P09132 144 aaKnown RBP9.31□□□□□ -0.92
CSNK1E-208ENST00000431611 RPL18AQ02543 176 aaKnown RBP9.31□□□□□ -0.92
CSNK1E-208ENST00000431611 Q6ZUT4 128 aa9.31□□□□□ -0.92
CSNK1E-208ENST00000431611 TMEM18Q96B42 140 aa9.31□□□□□ -0.92
CSNK1E-208ENST00000431611 PSORS1C2Q9UIG4 136 aa9.31□□□□□ -0.92
CSNK1E-208ENST00000431611 MT-ND6P03923 174 aa9.3□□□□□ -0.92
CSNK1E-208ENST00000431611 SPAG11BQ08648 103 aa9.3□□□□□ -0.92
CSNK1E-208ENST00000431611 TIMM21Q9BVV7 248 aa9.3□□□□□ -0.92
CSNK1E-208ENST00000431611 NAT8BQ9UHF3 227 aa9.3□□□□□ -0.92
CSNK1E-208ENST00000431611 A0A1B0GVG6 124 aa9.29□□□□□ -0.92
CSNK1E-208ENST00000431611 MRPL51Q4U2R6 128 aaKnown RBP9.29□□□□□ -0.92
CSNK1E-208ENST00000431611 FAM104BQ5XKR9 115 aa9.29□□□□□ -0.92
CSNK1E-208ENST00000431611 OPRPNQ99935 248 aaPredicted RBP9.29□□□□□ -0.92
CSNK1E-208ENST00000431611 TMEM241Q24JQ0 296 aa9.28□□□□□ -0.92
CSNK1E-208ENST00000431611 RNF151Q2KHN1 245 aa9.28□□□□□ -0.92
CSNK1E-208ENST00000431611 PHF5AQ7RTV0 110 aaKnown RBP9.28□□□□□ -0.92
CSNK1E-208ENST00000431611 C20orf78Q9BR46 151 aa9.28□□□□□ -0.92
CSNK1E-208ENST00000431611 LINC00862A6NCI5 91 aa9.27□□□□□ -0.93
CSNK1E-208ENST00000431611 C1orf137Q5JT78 98 aa9.27□□□□□ -0.93
CSNK1E-208ENST00000431611 OR10D4PQ8NGN7 298 aa9.27□□□□□ -0.93
CSNK1E-208ENST00000431611 TRBV24-1A0A075B6N3 115 aa9.26□□□□□ -0.93
CSNK1E-208ENST00000431611 TCAPO15273 167 aa9.26□□□□□ -0.93
CSNK1E-208ENST00000431611 CKS2P33552 79 aa9.26□□□□□ -0.93
CSNK1E-208ENST00000431611 RPL23P62829 140 aaKnown RBP9.26□□□□□ -0.93
CSNK1E-208ENST00000431611 FAM74A3Q4VXF1 159 aa9.26□□□□□ -0.93
CSNK1E-208ENST00000431611 ORAOV1Q8WV07 137 aa9.26□□□□□ -0.93
CSNK1E-208ENST00000431611 MRPL35Q9NZE8 188 aaKnown RBP9.26□□□□□ -0.93
CSNK1E-208ENST00000431611 F8WDY8 70 aa9.25□□□□□ -0.93
CSNK1E-208ENST00000431611 RPL39P62891 51 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms