RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 TSHBP01222 138 aa9.33□□□□□ -0.92
MSH5-208ENST00000429846 SS18Q15532 418 aa9.33□□□□□ -0.92
MSH5-208ENST00000429846 TRBV27A0A0K0K1C4 114 aa9.32□□□□□ -0.92
MSH5-208ENST00000429846 A0A1B0GUT8 65 aa9.32□□□□□ -0.92
MSH5-208ENST00000429846 CD164L2Q6UWJ8 174 aa9.32□□□□□ -0.92
MSH5-208ENST00000429846 LYPD6BQ8NI32 183 aa9.32□□□□□ -0.92
MSH5-208ENST00000429846 TMEM191AQ9H0A3 160 aa9.32□□□□□ -0.92
MSH5-208ENST00000429846 TMEM242Q9NWH2 141 aa9.32□□□□□ -0.92
MSH5-208ENST00000429846 C7orf77A4D0Y5 90 aa9.31□□□□□ -0.92
MSH5-208ENST00000429846 ZNF561-AS1K7EIQ3 104 aa9.31□□□□□ -0.92
MSH5-208ENST00000429846 POLR2KP53803 58 aaKnown RBP9.31□□□□□ -0.92
MSH5-208ENST00000429846 TSKUQ8WUA8 353 aa9.31□□□□□ -0.92
MSH5-208ENST00000429846 CDC42SE2Q9NRR3 84 aa9.31□□□□□ -0.92
MSH5-208ENST00000429846 HIGD1CA8MV81 97 aa9.3□□□□□ -0.92
MSH5-208ENST00000429846 SPINK6Q6UWN8 80 aa9.3□□□□□ -0.92
MSH5-208ENST00000429846 ZNF664Q8N3J9 261 aa9.3□□□□□ -0.92
MSH5-208ENST00000429846 ISOC2Q96AB3 205 aa9.3□□□□□ -0.92
MSH5-208ENST00000429846 GAS8-AS1O95177 125 aa9.29□□□□□ -0.92
MSH5-208ENST00000429846 PPP1R17O96001 155 aa9.29□□□□□ -0.92
MSH5-208ENST00000429846 CEBPGP53567 150 aa9.29□□□□□ -0.92
MSH5-208ENST00000429846 SYCNQ0VAF6 134 aa9.29□□□□□ -0.92
MSH5-208ENST00000429846 SMAGPQ0VAQ4 97 aa9.29□□□□□ -0.92
MSH5-208ENST00000429846 REG3GQ6UW15 175 aa9.29□□□□□ -0.92
MSH5-208ENST00000429846 ALKAL2Q6UX46 152 aa9.29□□□□□ -0.92
MSH5-208ENST00000429846 LINC01551Q86U37 167 aa9.29□□□□□ -0.92
MSH5-208ENST00000429846 SMIM7Q9BQ49 75 aa9.29□□□□□ -0.92
MSH5-208ENST00000429846 CSDC2Q9Y534 153 aaKnown RBP9.29□□□□□ -0.92
MSH5-208ENST00000429846 A0A0J9YXV3 536 aa9.28□□□□□ -0.92
MSH5-208ENST00000429846 C1orf196B1AJZ1 125 aa9.28□□□□□ -0.92
MSH5-208ENST00000429846 RAB4AP20338 218 aa9.28□□□□□ -0.92
MSH5-208ENST00000429846 CAMPP49913 170 aa9.28□□□□□ -0.92
MSH5-208ENST00000429846 Q6ZRP5 223 aa9.28□□□□□ -0.92
MSH5-208ENST00000429846 LINC00526Q96FQ7 95 aa9.28□□□□□ -0.92
MSH5-208ENST00000429846 PTTG1IPP53801 180 aa9.27□□□□□ -0.93
MSH5-208ENST00000429846 AMN1Q8IY45 258 aa9.27□□□□□ -0.93
MSH5-208ENST00000429846 OSTCQ9NRP0 149 aa9.27□□□□□ -0.93
MSH5-208ENST00000429846 LOC107984640A0A0U1RRK4 108 aa9.26□□□□□ -0.93
MSH5-208ENST00000429846 VCYO14598 125 aa9.26□□□□□ -0.93
MSH5-208ENST00000429846 MALP21145 153 aa9.26□□□□□ -0.93
MSH5-208ENST00000429846 FCER1GP30273 86 aa9.26□□□□□ -0.93
MSH5-208ENST00000429846 AKAP14Q86UN6 197 aa9.26□□□□□ -0.93
MSH5-208ENST00000429846 KIR2DL4Q99706 377 aa9.26□□□□□ -0.93
MSH5-208ENST00000429846 EIF5A2Q9GZV4 153 aaKnown RBP9.26□□□□□ -0.93
MSH5-208ENST00000429846 IGLV4-69A0A075B6H9 119 aa9.25□□□□□ -0.93
MSH5-208ENST00000429846 ZNF727A8MUV8 499 aa9.25□□□□□ -0.93
MSH5-208ENST00000429846 COX7A2LO14548 114 aa9.25□□□□□ -0.93
MSH5-208ENST00000429846 SUMO2P61956 95 aaKnown RBP9.25□□□□□ -0.93
MSH5-208ENST00000429846 RIGQ13278 110 aa9.25□□□□□ -0.93
MSH5-208ENST00000429846 PPP1R2P9O14990 202 aa9.24□□□□□ -0.93
MSH5-208ENST00000429846 UBE2D4Q9Y2X8 147 aa9.24□□□□□ -0.93
MSH5-208ENST00000429846 TNXBP22105 4242 aa9.24□□□□□ -0.93
MSH5-208ENST00000429846 APOMO95445 188 aa9.23□□□□□ -0.93
MSH5-208ENST00000429846 SRSF9Q13242 221 aaKnown RBP eCLIP9.23□□□□□ -0.93
MSH5-208ENST00000429846 NUP35Q8NFH5 326 aa9.23□□□□□ -0.93
MSH5-208ENST00000429846 TMEM18Q96B42 140 aa9.23□□□□□ -0.93
MSH5-208ENST00000429846 C2orf48Q96LS8 159 aa9.23□□□□□ -0.93
MSH5-208ENST00000429846 CAMK2N2Q96S95 79 aa9.23□□□□□ -0.93
MSH5-208ENST00000429846 V9GYV3 84 aa9.23□□□□□ -0.93
MSH5-208ENST00000429846 KRTAP10-8P60410 259 aa9.22□□□□□ -0.93
MSH5-208ENST00000429846 GAGE2BQ13066 116 aa9.22□□□□□ -0.93
MSH5-208ENST00000429846 NRACQ8N912 160 aa9.22□□□□□ -0.93
MSH5-208ENST00000429846 TIMM21Q9BVV7 248 aa9.22□□□□□ -0.93
MSH5-208ENST00000429846 NAT8BQ9UHF3 227 aa9.22□□□□□ -0.93
MSH5-208ENST00000429846 TRAV13-1A0A0B4J241 112 aa9.21□□□□□ -0.94
MSH5-208ENST00000429846 SMKR1H3BMG3 65 aa9.21□□□□□ -0.94
MSH5-208ENST00000429846 TCAPO15273 167 aa9.21□□□□□ -0.94
MSH5-208ENST00000429846 SRP19P09132 144 aaKnown RBP9.21□□□□□ -0.94
MSH5-208ENST00000429846 LINC00862A6NCI5 91 aa9.2□□□□□ -0.94
MSH5-208ENST00000429846 LRP2P98164 4655 aa9.19□□□□□ -0.94
MSH5-208ENST00000429846 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.19□□□□□ -0.94
MSH5-208ENST00000429846 RPL32P62910 135 aaKnown RBP9.19□□□□□ -0.94
MSH5-208ENST00000429846 FAM74A3Q4VXF1 159 aa9.19□□□□□ -0.94
MSH5-208ENST00000429846 RNASE13Q5GAN3 156 aaKnown RBP9.19□□□□□ -0.94
MSH5-208ENST00000429846 FAM104BQ5XKR9 115 aa9.19□□□□□ -0.94
MSH5-208ENST00000429846 Q6ZUT4 128 aa9.19□□□□□ -0.94
MSH5-208ENST00000429846 C20orf78Q9BR46 151 aa9.19□□□□□ -0.94
MSH5-208ENST00000429846 TRBV24-1A0A075B6N3 115 aa9.18□□□□□ -0.94
MSH5-208ENST00000429846 A0A1B0GW15 77 aa9.18□□□□□ -0.94
MSH5-208ENST00000429846 F8WDY8 70 aa9.18□□□□□ -0.94
MSH5-208ENST00000429846 RPL18AQ02543 176 aaKnown RBP9.18□□□□□ -0.94
MSH5-208ENST00000429846 SPAG11BQ08648 103 aa9.18□□□□□ -0.94
MSH5-208ENST00000429846 TMEM241Q24JQ0 296 aa9.18□□□□□ -0.94
MSH5-208ENST00000429846 RNF151Q2KHN1 245 aa9.18□□□□□ -0.94
MSH5-208ENST00000429846 MRPL51Q4U2R6 128 aaKnown RBP9.18□□□□□ -0.94
MSH5-208ENST00000429846 C9orf116Q5BN46 136 aaPredicted RBP9.18□□□□□ -0.94
MSH5-208ENST00000429846 OR10D4PQ8NGN7 298 aa9.18□□□□□ -0.94
MSH5-208ENST00000429846 A0A1W2PNN7 141 aa9.17□□□□□ -0.94
MSH5-208ENST00000429846 C5orf38Q86SI9 138 aa9.17□□□□□ -0.94
MSH5-208ENST00000429846 SMIM27A0A1W2PRY6 76 aa9.16□□□□□ -0.94
MSH5-208ENST00000429846 MT-ND6P03923 174 aa9.16□□□□□ -0.94
MSH5-208ENST00000429846 RPL23P62829 140 aaKnown RBP9.16□□□□□ -0.94
MSH5-208ENST00000429846 ODF1Q14990 250 aa9.16□□□□□ -0.94
MSH5-208ENST00000429846 SPANXA1Q9NS26 97 aa9.16□□□□□ -0.94
MSH5-208ENST00000429846 MRPL35Q9NZE8 188 aaKnown RBP9.16□□□□□ -0.94
MSH5-208ENST00000429846 PSORS1C2Q9UIG4 136 aa9.16□□□□□ -0.94
MSH5-208ENST00000429846 RNF213Q63HN8 5207 aa9.16□□□□□ -0.94
MSH5-208ENST00000429846 CKS2P33552 79 aa9.15□□□□□ -0.94
MSH5-208ENST00000429846 ADIRFQ15847 76 aa9.15□□□□□ -0.94
MSH5-208ENST00000429846 NAT8Q9UHE5 227 aa9.15□□□□□ -0.94
MSH5-208ENST00000429846 hCG_2014768A0A024R1R8 64 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms