RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 GATD1Q8NB37 220 aa12.91□□□□□ -0.34
CCDC107-206ENST00000426546 TGIF2-C20orf24A0A0A6YYL0 155 aa12.9□□□□□ -0.34
CCDC107-206ENST00000426546 LRP1Q07954 4544 aaKnown RBP12.89□□□□□ -0.35
CCDC107-206ENST00000426546 HMCN2Q8NDA2 5059 aa12.89□□□□□ -0.35
CCDC107-206ENST00000426546 CNBPP62633 177 aaKnown RBP12.89□□□□□ -0.35
CCDC107-206ENST00000426546 MRPL51Q4U2R6 128 aaKnown RBP12.89□□□□□ -0.35
CCDC107-206ENST00000426546 MRAP2Q96G30 205 aa12.88□□□□□ -0.35
CCDC107-206ENST00000426546 TRBV24-1A0A075B6N3 115 aa12.87□□□□□ -0.35
CCDC107-206ENST00000426546 SMKR1H3BMG3 65 aa12.87□□□□□ -0.35
CCDC107-206ENST00000426546 SDIM1Q6ZPB5 146 aa12.87□□□□□ -0.35
CCDC107-206ENST00000426546 TMEM136Q6ZRR5 245 aa12.87□□□□□ -0.35
CCDC107-206ENST00000426546 RPL39LQ96EH5 51 aaKnown RBP12.87□□□□□ -0.35
CCDC107-206ENST00000426546 hDV102S1A0JD36 115 aa12.86□□□□□ -0.35
CCDC107-206ENST00000426546 SCO1O75880 301 aa12.86□□□□□ -0.35
CCDC107-206ENST00000426546 GAS8-AS1O95177 125 aa12.86□□□□□ -0.35
CCDC107-206ENST00000426546 NCR2O95944 276 aa12.86□□□□□ -0.35
CCDC107-206ENST00000426546 COX19Q49B96 90 aa12.86□□□□□ -0.35
CCDC107-206ENST00000426546 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.86□□□□□ -0.35
CCDC107-206ENST00000426546 CKS2P33552 79 aa12.85□□□□□ -0.35
CCDC107-206ENST00000426546 RPL37AP61513 92 aaKnown RBP12.85□□□□□ -0.35
CCDC107-206ENST00000426546 YPEL4Q96NS1 127 aa12.85□□□□□ -0.35
CCDC107-206ENST00000426546 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.84□□□□□ -0.35
CCDC107-206ENST00000426546 GNB1LQ9BYB4 327 aa12.84□□□□□ -0.35
CCDC107-206ENST00000426546 AP5S1Q9NUS5 200 aa12.84□□□□□ -0.35
CCDC107-206ENST00000426546 D6R8Y8 96 aa12.83□□□□□ -0.36
CCDC107-206ENST00000426546 H7C423 109 aa12.83□□□□□ -0.36
CCDC107-206ENST00000426546 PANO1I0J062 215 aa12.83□□□□□ -0.36
CCDC107-206ENST00000426546 OXTP01178 125 aa12.83□□□□□ -0.36
CCDC107-206ENST00000426546 APCSP02743 223 aa12.83□□□□□ -0.36
CCDC107-206ENST00000426546 RPS10P46783 165 aaKnown RBP12.83□□□□□ -0.36
CCDC107-206ENST00000426546 CIRBPQ14011 172 aaKnown RBP12.83□□□□□ -0.36
CCDC107-206ENST00000426546 SDHAF1A6NFY7 115 aa12.82□□□□□ -0.36
CCDC107-206ENST00000426546 AMMECR1LQ6DCA0 310 aa12.82□□□□□ -0.36
CCDC107-206ENST00000426546 UBR4Q5T4S7 5183 aa12.81□□□□□ -0.36
CCDC107-206ENST00000426546 IGHV3-64A0A075B6Q5 118 aa12.81□□□□□ -0.36
CCDC107-206ENST00000426546 PPP1R17O96001 155 aa12.81□□□□□ -0.36
CCDC107-206ENST00000426546 PPBPP02775 128 aa12.81□□□□□ -0.36
CCDC107-206ENST00000426546 MT-ND6P03923 174 aa12.81□□□□□ -0.36
CCDC107-206ENST00000426546 KIAA1644Q3SXP7 199 aa12.81□□□□□ -0.36
CCDC107-206ENST00000426546 ORMDL3Q8N138 153 aa12.81□□□□□ -0.36
CCDC107-206ENST00000426546 NRACQ8N912 160 aa12.81□□□□□ -0.36
CCDC107-206ENST00000426546 MRPL18Q9H0U6 180 aaKnown RBP12.81□□□□□ -0.36
CCDC107-206ENST00000426546 ST20Q9HBF5 79 aa12.81□□□□□ -0.36
CCDC107-206ENST00000426546 FAT3Q8TDW7 4589 aa12.81□□□□□ -0.36
CCDC107-206ENST00000426546 TRBV6-5A0A0K0K1A5 114 aa12.8□□□□□ -0.36
CCDC107-206ENST00000426546 GAGE12HA6NDE8 117 aa12.8□□□□□ -0.36
CCDC107-206ENST00000426546 SLPIP03973 132 aa12.8□□□□□ -0.36
CCDC107-206ENST00000426546 FABP9Q0Z7S8 132 aa12.8□□□□□ -0.36
CCDC107-206ENST00000426546 CFAP161Q6P656 301 aa12.8□□□□□ -0.36
CCDC107-206ENST00000426546 C15orf56Q8N910 161 aa12.8□□□□□ -0.36
CCDC107-206ENST00000426546 PRELID3AQ96N28 172 aa12.8□□□□□ -0.36
CCDC107-206ENST00000426546 TRAPPC1Q9Y5R8 145 aa12.8□□□□□ -0.36
CCDC107-206ENST00000426546 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.79□□□□□ -0.36
CCDC107-206ENST00000426546 IGKV2-29A2NJV5 120 aaPredicted RBP12.79□□□□□ -0.36
CCDC107-206ENST00000426546 TNFRSF6BO95407 300 aa12.79□□□□□ -0.36
CCDC107-206ENST00000426546 PLA2G2DQ9UNK4 145 aa12.79□□□□□ -0.36
CCDC107-206ENST00000426546 IGKV3OR2-268A0A0C4DH90 116 aa12.78□□□□□ -0.36
CCDC107-206ENST00000426546 NPYP01303 97 aa12.78□□□□□ -0.36
CCDC107-206ENST00000426546 FGF6P10767 208 aa12.78□□□□□ -0.36
CCDC107-206ENST00000426546 ZNF25P17030 456 aaPredicted RBP12.78□□□□□ -0.36
CCDC107-206ENST00000426546 RNASEKQ6P5S7 137 aaKnown RBP12.78□□□□□ -0.36
CCDC107-206ENST00000426546 COLCA2A8K830 154 aa12.77□□□□□ -0.37
CCDC107-206ENST00000426546 I3L3M4 83 aa12.77□□□□□ -0.37
CCDC107-206ENST00000426546 PMCHP20382 165 aa12.77□□□□□ -0.37
CCDC107-206ENST00000426546 CHCHD10Q8WYQ3 142 aaPredicted RBP12.77□□□□□ -0.37
CCDC107-206ENST00000426546 SUMO2P61956 95 aaKnown RBP12.76□□□□□ -0.37
CCDC107-206ENST00000426546 C20orf78Q9BR46 151 aa12.76□□□□□ -0.37
CCDC107-206ENST00000426546 PKHD1L1Q86WI1 4243 aa12.75□□□□□ -0.37
CCDC107-206ENST00000426546 PHOX2AO14813 284 aa12.75□□□□□ -0.37
CCDC107-206ENST00000426546 POLR2KP53803 58 aaKnown RBP12.75□□□□□ -0.37
CCDC107-206ENST00000426546 SPACA4Q8TDM5 124 aa12.75□□□□□ -0.37
CCDC107-206ENST00000426546 LAMTOR2Q9Y2Q5 125 aa12.75□□□□□ -0.37
CCDC107-206ENST00000426546 VCYO14598 125 aa12.74□□□□□ -0.37
CCDC107-206ENST00000426546 HNRNPA3P51991 378 aaKnown RBP12.74□□□□□ -0.37
CCDC107-206ENST00000426546 OR5A1Q8NGJ0 315 aa12.74□□□□□ -0.37
CCDC107-206ENST00000426546 GVQW2A0A096LPI5 108 aaPredicted RBP12.73□□□□□ -0.37
CCDC107-206ENST00000426546 TSHBP01222 138 aa12.73□□□□□ -0.37
CCDC107-206ENST00000426546 ESDP10768 282 aa12.73□□□□□ -0.37
CCDC107-206ENST00000426546 RAB5AP20339 215 aa12.73□□□□□ -0.37
CCDC107-206ENST00000426546 TMEM101Q96IK0 257 aa12.73□□□□□ -0.37
CCDC107-206ENST00000426546 A0A087WYN8 130 aa12.72□□□□□ -0.37
CCDC107-206ENST00000426546 LOC389332A0A1B0GUA5 103 aa12.72□□□□□ -0.37
CCDC107-206ENST00000426546 CHTF8P0CG12 524 aa12.72□□□□□ -0.37
CCDC107-206ENST00000426546 HIGD2BQ4VC39 106 aa12.72□□□□□ -0.37
CCDC107-206ENST00000426546 DPH3Q96FX2 82 aa12.72□□□□□ -0.37
CCDC107-206ENST00000426546 ALKBH7Q9BT30 221 aaPredicted RBP12.72□□□□□ -0.37
CCDC107-206ENST00000426546 MAP1LC3AQ9H492 121 aa12.72□□□□□ -0.37
CCDC107-206ENST00000426546 TRBV27A0A0K0K1C4 114 aa12.71□□□□□ -0.37
CCDC107-206ENST00000426546 FOXI1Q12951 378 aa12.71□□□□□ -0.37
CCDC107-206ENST00000426546 SMIM2Q9BVW6 85 aa12.71□□□□□ -0.37
CCDC107-206ENST00000426546 PLAC8Q9NZF1 115 aa12.71□□□□□ -0.37
CCDC107-206ENST00000426546 RPL32P62910 135 aaKnown RBP12.7□□□□□ -0.38
CCDC107-206ENST00000426546 MRPL52Q86TS9 123 aaKnown RBP12.7□□□□□ -0.38
CCDC107-206ENST00000426546 LINC00959A0A1B0GUT2 108 aa12.69□□□□□ -0.38
CCDC107-206ENST00000426546 TRGC2P03986 189 aa12.69□□□□□ -0.38
CCDC107-206ENST00000426546 FCER1GP30273 86 aa12.69□□□□□ -0.38
CCDC107-206ENST00000426546 COX6A2Q02221 97 aa12.69□□□□□ -0.38
CCDC107-206ENST00000426546 KIR2DL4Q99706 377 aa12.69□□□□□ -0.38
CCDC107-206ENST00000426546 PRSS47A8MTI9 375 aa12.68□□□□□ -0.38
CCDC107-206ENST00000426546 XCL1P47992 114 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms