RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 CCL25O15444 150 aa5.94□□□□□ -1.46
NUP50-206ENST00000422489 CHTF8P0CG12 524 aa5.94□□□□□ -1.46
NUP50-206ENST00000422489 ZNF25P17030 456 aaPredicted RBP5.94□□□□□ -1.46
NUP50-206ENST00000422489 FCER1GP30273 86 aa5.94□□□□□ -1.46
NUP50-206ENST00000422489 RPS10P46783 165 aaKnown RBP5.94□□□□□ -1.46
NUP50-206ENST00000422489 XCL1P47992 114 aa5.94□□□□□ -1.46
NUP50-206ENST00000422489 CAMPP49913 170 aa5.94□□□□□ -1.46
NUP50-206ENST00000422489 KRTAP10-4P60372 401 aaPredicted RBP5.94□□□□□ -1.46
NUP50-206ENST00000422489 PEA15Q15121 130 aa5.94□□□□□ -1.46
NUP50-206ENST00000422489 ISOC2Q96AB3 205 aa5.94□□□□□ -1.46
NUP50-206ENST00000422489 LINC00959A0A1B0GUT2 108 aa5.93□□□□□ -1.46
NUP50-206ENST00000422489 C9JQL5 133 aa5.93□□□□□ -1.46
NUP50-206ENST00000422489 ESDP10768 282 aa5.93□□□□□ -1.46
NUP50-206ENST00000422489 POLR2KP53803 58 aaKnown RBP5.93□□□□□ -1.46
NUP50-206ENST00000422489 SRSF3P84103 164 aaKnown RBP5.93□□□□□ -1.46
NUP50-206ENST00000422489 COX6A2Q02221 97 aa5.93□□□□□ -1.46
NUP50-206ENST00000422489 SS18Q15532 418 aa5.93□□□□□ -1.46
NUP50-206ENST00000422489 NAT8Q9UHE5 227 aa5.93□□□□□ -1.46
NUP50-206ENST00000422489 NAT8BQ9UHF3 227 aa5.93□□□□□ -1.46
NUP50-206ENST00000422489 FLG2Q5D862 2391 aaPredicted RBP5.92□□□□□ -1.46
NUP50-206ENST00000422489 DMBT1Q9UGM3 2413 aaPredicted RBP5.92□□□□□ -1.46
NUP50-206ENST00000422489 A0A087WYN8 130 aa5.92□□□□□ -1.46
NUP50-206ENST00000422489 IGKV2-24A0A0C4DH68 120 aa5.92□□□□□ -1.46
NUP50-206ENST00000422489 TRBV27A0A0K0K1C4 114 aa5.92□□□□□ -1.46
NUP50-206ENST00000422489 PPP1R17O96001 155 aa5.92□□□□□ -1.46
NUP50-206ENST00000422489 FOXI1Q12951 378 aa5.92□□□□□ -1.46
NUP50-206ENST00000422489 MAJINQ3KP22 176 aa5.92□□□□□ -1.46
NUP50-206ENST00000422489 ZNF664Q8N3J9 261 aa5.92□□□□□ -1.46
NUP50-206ENST00000422489 PRSS3P2Q8NHM4 247 aa5.92□□□□□ -1.46
NUP50-206ENST00000422489 CDC42SE2Q9NRR3 84 aa5.92□□□□□ -1.46
NUP50-206ENST00000422489 IGHV1-58A0A0C4DH39 117 aa5.91□□□□□ -1.46
NUP50-206ENST00000422489 C7orf77A4D0Y5 90 aa5.91□□□□□ -1.46
NUP50-206ENST00000422489 OXTP01178 125 aa5.91□□□□□ -1.46
NUP50-206ENST00000422489 CKS2P33552 79 aa5.91□□□□□ -1.46
NUP50-206ENST00000422489 MRPL51Q4U2R6 128 aaKnown RBP5.91□□□□□ -1.46
NUP50-206ENST00000422489 LINC00526Q96FQ7 95 aa5.91□□□□□ -1.46
NUP50-206ENST00000422489 MYCBP2O75592 4640 aa5.9□□□□□ -1.46
NUP50-206ENST00000422489 SMIM27A0A1W2PRY6 76 aa5.9□□□□□ -1.46
NUP50-206ENST00000422489 MALP21145 153 aa5.9□□□□□ -1.46
NUP50-206ENST00000422489 HNRNPA3P51991 378 aaKnown RBP5.9□□□□□ -1.46
NUP50-206ENST00000422489 SUMO2P61956 95 aaKnown RBP5.9□□□□□ -1.46
NUP50-206ENST00000422489 CIRBPQ14011 172 aaKnown RBP5.9□□□□□ -1.46
NUP50-206ENST00000422489 FAM104BQ5XKR9 115 aa5.9□□□□□ -1.46
NUP50-206ENST00000422489 MRPL52Q86TS9 123 aaKnown RBP5.9□□□□□ -1.46
NUP50-206ENST00000422489 NRACQ8N912 160 aa5.9□□□□□ -1.46
NUP50-206ENST00000422489 SPACA4Q8TDM5 124 aa5.9□□□□□ -1.46
NUP50-206ENST00000422489 KIR2DL4Q99706 377 aa5.9□□□□□ -1.46
NUP50-206ENST00000422489 GVQW2A0A096LPI5 108 aaPredicted RBP5.89□□□□□ -1.47
NUP50-206ENST00000422489 LINC00862A6NCI5 91 aa5.89□□□□□ -1.47
NUP50-206ENST00000422489 ZNF561-AS1K7EIQ3 104 aa5.89□□□□□ -1.47
NUP50-206ENST00000422489 PPP1R2P9O14990 202 aa5.89□□□□□ -1.47
NUP50-206ENST00000422489 SMAGPQ0VAQ4 97 aa5.89□□□□□ -1.47
NUP50-206ENST00000422489 RNASE13Q5GAN3 156 aaKnown RBP5.89□□□□□ -1.47
NUP50-206ENST00000422489 MRPL54Q6P161 138 aaKnown RBP5.89□□□□□ -1.47
NUP50-206ENST00000422489 CD164L2Q6UWJ8 174 aa5.89□□□□□ -1.47
NUP50-206ENST00000422489 STPG4Q8N801 248 aa5.89□□□□□ -1.47
NUP50-206ENST00000422489 TRAV13-1A0A0B4J241 112 aa5.88□□□□□ -1.47
NUP50-206ENST00000422489 A0A1B0GW15 77 aa5.88□□□□□ -1.47
NUP50-206ENST00000422489 C1orf196B1AJZ1 125 aa5.88□□□□□ -1.47
NUP50-206ENST00000422489 F8W036 122 aa5.88□□□□□ -1.47
NUP50-206ENST00000422489 S100A8P05109 93 aa5.88□□□□□ -1.47
NUP50-206ENST00000422489 C7orf33Q8WU49 177 aa5.88□□□□□ -1.47
NUP50-206ENST00000422489 TMEM18Q96B42 140 aa5.88□□□□□ -1.47
NUP50-206ENST00000422489 SMDT1Q9H4I9 107 aa5.88□□□□□ -1.47
NUP50-206ENST00000422489 PLAC8Q9NZF1 115 aa5.88□□□□□ -1.47
NUP50-206ENST00000422489 UBE2D4Q9Y2X8 147 aa5.88□□□□□ -1.47
NUP50-206ENST00000422489 A0A096LNI7 61 aa5.87□□□□□ -1.47
NUP50-206ENST00000422489 COX7A2LO14548 114 aa5.87□□□□□ -1.47
NUP50-206ENST00000422489 PHOX2AO14813 284 aa5.87□□□□□ -1.47
NUP50-206ENST00000422489 TNFRSF6BO95407 300 aa5.87□□□□□ -1.47
NUP50-206ENST00000422489 HBBP68871 147 aa5.87□□□□□ -1.47
NUP50-206ENST00000422489 SYCNQ0VAF6 134 aa5.87□□□□□ -1.47
NUP50-206ENST00000422489 SERTAD4-AS1Q5TG53 156 aa5.87□□□□□ -1.47
NUP50-206ENST00000422489 C5orf38Q86SI9 138 aa5.87□□□□□ -1.47
NUP50-206ENST00000422489 CARD19Q96LW7 228 aa5.87□□□□□ -1.47
NUP50-206ENST00000422489 C20orf78Q9BR46 151 aa5.87□□□□□ -1.47
NUP50-206ENST00000422489 IGLV4-69A0A075B6H9 119 aa5.86□□□□□ -1.47
NUP50-206ENST00000422489 D6R8Y8 96 aa5.86□□□□□ -1.47
NUP50-206ENST00000422489 TCAPO15273 167 aa5.86□□□□□ -1.47
NUP50-206ENST00000422489 CSDC2Q9Y534 153 aaKnown RBP5.86□□□□□ -1.47
NUP50-206ENST00000422489 TRBV24-1A0A075B6N3 115 aa5.85□□□□□ -1.47
NUP50-206ENST00000422489 RAB14P61106 215 aa5.85□□□□□ -1.47
NUP50-206ENST00000422489 RPL39P62891 51 aaKnown RBP5.85□□□□□ -1.47
NUP50-206ENST00000422489 GAGE2BQ13066 116 aa5.85□□□□□ -1.47
NUP50-206ENST00000422489 TMEM136Q6ZRR5 245 aa5.85□□□□□ -1.47
NUP50-206ENST00000422489 Q6ZRU5 148 aa5.85□□□□□ -1.47
NUP50-206ENST00000422489 Q6ZUT4 128 aa5.85□□□□□ -1.47
NUP50-206ENST00000422489 CAMK2N2Q96S95 79 aa5.85□□□□□ -1.47
NUP50-206ENST00000422489 OPRPNQ99935 248 aaPredicted RBP5.85□□□□□ -1.47
NUP50-206ENST00000422489 LINC00474Q9P2X8 69 aa5.85□□□□□ -1.47
NUP50-206ENST00000422489 PKIGQ9Y2B9 76 aa5.85□□□□□ -1.47
NUP50-206ENST00000422489 APOMO95445 188 aa5.84□□□□□ -1.47
NUP50-206ENST00000422489 NPYP01303 97 aa5.84□□□□□ -1.47
NUP50-206ENST00000422489 RAB5AP20339 215 aa5.84□□□□□ -1.47
NUP50-206ENST00000422489 TIMM21Q9BVV7 248 aa5.84□□□□□ -1.47
NUP50-206ENST00000422489 SMIM2Q9BVW6 85 aa5.84□□□□□ -1.47
NUP50-206ENST00000422489 LOC107984640A0A0U1RRK4 108 aa5.83□□□□□ -1.48
NUP50-206ENST00000422489 LOC389332A0A1B0GUA5 103 aa5.83□□□□□ -1.48
NUP50-206ENST00000422489 A0A1B0GXF2 115 aa5.83□□□□□ -1.48
NUP50-206ENST00000422489 PPBPP02775 128 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms