RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 Q6ZNX1 250 aa4.45□□□□□ -1.7
RFX3-205ENST00000420720 C9orf62Q8N4C0 152 aa4.45□□□□□ -1.7
RFX3-205ENST00000420720 RPL39LQ96EH5 51 aaKnown RBP4.45□□□□□ -1.7
RFX3-205ENST00000420720 LINC01600Q96MT4 127 aa4.45□□□□□ -1.7
RFX3-205ENST00000420720 A0A096LNI7 61 aa4.44□□□□□ -1.7
RFX3-205ENST00000420720 GVQW2A0A096LPI5 108 aaPredicted RBP4.44□□□□□ -1.7
RFX3-205ENST00000420720 TEX46H3BTG2 121 aa4.44□□□□□ -1.7
RFX3-205ENST00000420720 FGF6P10767 208 aa4.44□□□□□ -1.7
RFX3-205ENST00000420720 FOXA3P55318 350 aaPredicted RBP4.44□□□□□ -1.7
RFX3-205ENST00000420720 PRR3P79522 188 aaKnown RBP4.44□□□□□ -1.7
RFX3-205ENST00000420720 SMIM12Q96EX1 92 aa4.44□□□□□ -1.7
RFX3-205ENST00000420720 TRAV1-1A0A0B4J248 108 aa4.43□□□□□ -1.7
RFX3-205ENST00000420720 A0A0J9YXV3 536 aa4.43□□□□□ -1.7
RFX3-205ENST00000420720 PDE6DO43924 150 aa4.43□□□□□ -1.7
RFX3-205ENST00000420720 NCR2O95944 276 aa4.43□□□□□ -1.7
RFX3-205ENST00000420720 APCSP02743 223 aa4.43□□□□□ -1.7
RFX3-205ENST00000420720 CTRLP40313 264 aa4.43□□□□□ -1.7
RFX3-205ENST00000420720 XCL1P47992 114 aa4.43□□□□□ -1.7
RFX3-205ENST00000420720 KRTAP10-8P60410 259 aa4.43□□□□□ -1.7
RFX3-205ENST00000420720 MEF2BQ02080 365 aaPredicted RBP4.43□□□□□ -1.7
RFX3-205ENST00000420720 FOXI1Q12951 378 aa4.43□□□□□ -1.7
RFX3-205ENST00000420720 OR5A1Q8NGJ0 315 aa4.43□□□□□ -1.7
RFX3-205ENST00000420720 LINC00526Q96FQ7 95 aa4.43□□□□□ -1.7
RFX3-205ENST00000420720 RNASE7Q9H1E1 156 aaKnown RBP4.43□□□□□ -1.7
RFX3-205ENST00000420720 BIN3Q9NQY0 253 aa4.43□□□□□ -1.7
RFX3-205ENST00000420720 SDHAF1A6NFY7 115 aa4.42□□□□□ -1.7
RFX3-205ENST00000420720 H7C423 109 aa4.42□□□□□ -1.7
RFX3-205ENST00000420720 K7EN84 100 aa4.42□□□□□ -1.7
RFX3-205ENST00000420720 CCL25O15444 150 aa4.42□□□□□ -1.7
RFX3-205ENST00000420720 PMCHP20382 165 aa4.42□□□□□ -1.7
RFX3-205ENST00000420720 SPINK6Q6UWN8 80 aa4.42□□□□□ -1.7
RFX3-205ENST00000420720 SMIM15Q7Z3B0 74 aa4.42□□□□□ -1.7
RFX3-205ENST00000420720 OCC1Q8TAD7 63 aa4.42□□□□□ -1.7
RFX3-205ENST00000420720 BTF3L4Q96K17 158 aa4.42□□□□□ -1.7
RFX3-205ENST00000420720 CNFNQ9BYD5 112 aa4.42□□□□□ -1.7
RFX3-205ENST00000420720 RPP21Q9H633 154 aaKnown RBP4.42□□□□□ -1.7
RFX3-205ENST00000420720 IGHV1-58A0A0C4DH39 117 aa4.41□□□□□ -1.7
RFX3-205ENST00000420720 LINC00959A0A1B0GUT2 108 aa4.41□□□□□ -1.7
RFX3-205ENST00000420720 FAM231BA6NCW3 169 aa4.41□□□□□ -1.7
RFX3-205ENST00000420720 ZNF561-AS1K7EIQ3 104 aa4.41□□□□□ -1.7
RFX3-205ENST00000420720 BCL2P10415 239 aa4.41□□□□□ -1.7
RFX3-205ENST00000420720 SRSF9Q13242 221 aaKnown RBP eCLIP4.41□□□□□ -1.7
RFX3-205ENST00000420720 EIF5AL1Q6IS14 154 aaKnown RBP4.41□□□□□ -1.7
RFX3-205ENST00000420720 REG3GQ6UW15 175 aa4.41□□□□□ -1.7
RFX3-205ENST00000420720 TMEM101Q96IK0 257 aa4.41□□□□□ -1.7
RFX3-205ENST00000420720 CARD19Q96LW7 228 aa4.41□□□□□ -1.7
RFX3-205ENST00000420720 TRBV6-5A0A0K0K1A5 114 aa4.4□□□□□ -1.71
RFX3-205ENST00000420720 A0A0U1RQV1 116 aa4.4□□□□□ -1.71
RFX3-205ENST00000420720 I3L3M4 83 aa4.4□□□□□ -1.71
RFX3-205ENST00000420720 GATCO43716 136 aaKnown RBP4.4□□□□□ -1.71
RFX3-205ENST00000420720 ESDP10768 282 aa4.4□□□□□ -1.71
RFX3-205ENST00000420720 ZNF25P17030 456 aaPredicted RBP4.4□□□□□ -1.71
RFX3-205ENST00000420720 SYCNQ0VAF6 134 aa4.4□□□□□ -1.71
RFX3-205ENST00000420720 GAGE2BQ13066 116 aa4.4□□□□□ -1.71
RFX3-205ENST00000420720 SS18Q15532 418 aa4.4□□□□□ -1.71
RFX3-205ENST00000420720 Q6ZRP5 223 aa4.4□□□□□ -1.71
RFX3-205ENST00000420720 TMEM242Q9NWH2 141 aa4.4□□□□□ -1.71
RFX3-205ENST00000420720 LINC00474Q9P2X8 69 aa4.4□□□□□ -1.71
RFX3-205ENST00000420720 PKIGQ9Y2B9 76 aa4.4□□□□□ -1.71
RFX3-205ENST00000420720 KRTAP23-1A1A580 65 aa4.39□□□□□ -1.71
RFX3-205ENST00000420720 TSHBP01222 138 aa4.39□□□□□ -1.71
RFX3-205ENST00000420720 TEX261Q6UWH6 196 aa4.39□□□□□ -1.71
RFX3-205ENST00000420720 ST20Q9HBF5 79 aa4.39□□□□□ -1.71
RFX3-205ENST00000420720 CDC42SE2Q9NRR3 84 aa4.39□□□□□ -1.71
RFX3-205ENST00000420720 IGLV4-69A0A075B6H9 119 aa4.38□□□□□ -1.71
RFX3-205ENST00000420720 A0A1W2PNN7 141 aa4.38□□□□□ -1.71
RFX3-205ENST00000420720 CAMPP49913 170 aa4.38□□□□□ -1.71
RFX3-205ENST00000420720 PTTG1IPP53801 180 aa4.38□□□□□ -1.71
RFX3-205ENST00000420720 CD164L2Q6UWJ8 174 aa4.38□□□□□ -1.71
RFX3-205ENST00000420720 ZNF664Q8N3J9 261 aa4.38□□□□□ -1.71
RFX3-205ENST00000420720 MRAP2Q96G30 205 aa4.38□□□□□ -1.71
RFX3-205ENST00000420720 LOC107984640A0A0U1RRK4 108 aa4.37□□□□□ -1.71
RFX3-205ENST00000420720 A8MWL6 223 aa4.37□□□□□ -1.71
RFX3-205ENST00000420720 RAB4AP20338 218 aa4.37□□□□□ -1.71
RFX3-205ENST00000420720 MALP21145 153 aa4.37□□□□□ -1.71
RFX3-205ENST00000420720 TAGLN2P37802 199 aaKnown RBP4.37□□□□□ -1.71
RFX3-205ENST00000420720 CEBPGP53567 150 aa4.37□□□□□ -1.71
RFX3-205ENST00000420720 POLR2KP53803 58 aaKnown RBP4.37□□□□□ -1.71
RFX3-205ENST00000420720 FAM231DQ6ZW35 169 aa4.37□□□□□ -1.71
RFX3-205ENST00000420720 MRPL52Q86TS9 123 aaKnown RBP4.37□□□□□ -1.71
RFX3-205ENST00000420720 SLC51BQ86UW2 128 aa4.37□□□□□ -1.71
RFX3-205ENST00000420720 ISOC2Q96AB3 205 aa4.37□□□□□ -1.71
RFX3-205ENST00000420720 BORCS7Q96B45 105 aa4.37□□□□□ -1.71
RFX3-205ENST00000420720 CAMK2N2Q96S95 79 aa4.37□□□□□ -1.71
RFX3-205ENST00000420720 TRBV27A0A0K0K1C4 114 aa4.36□□□□□ -1.71
RFX3-205ENST00000420720 C7orf77A4D0Y5 90 aa4.36□□□□□ -1.71
RFX3-205ENST00000420720 SMKR1H3BMG3 65 aa4.36□□□□□ -1.71
RFX3-205ENST00000420720 COX7A2LO14548 114 aa4.36□□□□□ -1.71
RFX3-205ENST00000420720 MT-ND6P03923 174 aa4.36□□□□□ -1.71
RFX3-205ENST00000420720 C9orf116Q5BN46 136 aaPredicted RBP4.36□□□□□ -1.71
RFX3-205ENST00000420720 RNASE13Q5GAN3 156 aaKnown RBP4.36□□□□□ -1.71
RFX3-205ENST00000420720 PHF5AQ7RTV0 110 aaKnown RBP4.36□□□□□ -1.71
RFX3-205ENST00000420720 C5orf38Q86SI9 138 aa4.36□□□□□ -1.71
RFX3-205ENST00000420720 AMN1Q8IY45 258 aa4.36□□□□□ -1.71
RFX3-205ENST00000420720 NUP35Q8NFH5 326 aa4.36□□□□□ -1.71
RFX3-205ENST00000420720 TMEM191AQ9H0A3 160 aa4.36□□□□□ -1.71
RFX3-205ENST00000420720 PSORS1C2Q9UIG4 136 aa4.36□□□□□ -1.71
RFX3-205ENST00000420720 TRAV13-1A0A0B4J241 112 aa4.35□□□□□ -1.71
RFX3-205ENST00000420720 A0A1B0GUT8 65 aa4.35□□□□□ -1.71
RFX3-205ENST00000420720 HIGD1CA8MV81 97 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms