RNA–Protein interactions for RNA: ENST00000417382.5

HMG20B-204, Transcript of high mobility group 20B, humanhuman

TSL 4

Gene HMG20B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-204ENST00000417382 CTDSP1Q9GZU7 261 aa13.76□□□□□ -0.21
HMG20B-204ENST00000417382 PRSS1P07477 247 aa13.75□□□□□ -0.21
HMG20B-204ENST00000417382 ORMDL3Q8N138 153 aa13.75□□□□□ -0.21
HMG20B-204ENST00000417382 SMIM2Q9BVW6 85 aa13.74□□□□□ -0.21
HMG20B-204ENST00000417382 KRTAP4-5Q9BYR2 181 aa13.74□□□□□ -0.21
HMG20B-204ENST00000417382 CDC42SE2Q9NRR3 84 aa13.74□□□□□ -0.21
HMG20B-204ENST00000417382 TMEM136Q6ZRR5 245 aa13.73□□□□□ -0.21
HMG20B-204ENST00000417382 COMMD7Q86VX2 200 aa13.73□□□□□ -0.21
HMG20B-204ENST00000417382 TMEM18Q96B42 140 aa13.73□□□□□ -0.21
HMG20B-204ENST00000417382 FAM30AQ9NZY2 134 aa13.73□□□□□ -0.21
HMG20B-204ENST00000417382 LAMTOR2Q9Y2Q5 125 aa13.73□□□□□ -0.21
HMG20B-204ENST00000417382 NPYP01303 97 aa13.72□□□□□ -0.21
HMG20B-204ENST00000417382 ZNF664Q8N3J9 261 aa13.72□□□□□ -0.21
HMG20B-204ENST00000417382 CHCHD10Q8WYQ3 142 aaPredicted RBP13.72□□□□□ -0.21
HMG20B-204ENST00000417382 TIMM21Q9BVV7 248 aa13.72□□□□□ -0.21
HMG20B-204ENST00000417382 TRAV9-1A0A075B6T8 112 aa13.71□□□□□ -0.21
HMG20B-204ENST00000417382 IGKV3OR2-268A0A0C4DH90 116 aa13.71□□□□□ -0.21
HMG20B-204ENST00000417382 GAGE12HA6NDE8 117 aa13.71□□□□□ -0.21
HMG20B-204ENST00000417382 CFAP161Q6P656 301 aa13.71□□□□□ -0.21
HMG20B-204ENST00000417382 PCLOQ9Y6V0 5065 aa13.71□□□□□ -0.21
HMG20B-204ENST00000417382 PRSS47A8MTI9 375 aa13.7□□□□□ -0.22
HMG20B-204ENST00000417382 CNBPP62633 177 aaKnown RBP13.7□□□□□ -0.22
HMG20B-204ENST00000417382 C10orf91Q5T1B1 145 aa13.7□□□□□ -0.22
HMG20B-204ENST00000417382 PRELID3AQ96N28 172 aa13.7□□□□□ -0.22
HMG20B-204ENST00000417382 UBE2D4Q9Y2X8 147 aa13.7□□□□□ -0.22
HMG20B-204ENST00000417382 LINC00959A0A1B0GUT2 108 aa13.69□□□□□ -0.22
HMG20B-204ENST00000417382 CCL25O15444 150 aa13.69□□□□□ -0.22
HMG20B-204ENST00000417382 C9orf163Q8N9P6 203 aa13.69□□□□□ -0.22
HMG20B-204ENST00000417382 hDV102S1A0JD36 115 aa13.68□□□□□ -0.22
HMG20B-204ENST00000417382 EPM2AB3EWF7 344 aa13.68□□□□□ -0.22
HMG20B-204ENST00000417382 FOXI1Q12951 378 aa13.67□□□□□ -0.22
HMG20B-204ENST00000417382 SS18Q15532 418 aa13.67□□□□□ -0.22
HMG20B-204ENST00000417382 LINC01620Q4KN68 170 aa13.67□□□□□ -0.22
HMG20B-204ENST00000417382 ABCA13Q86UQ4 5058 aa13.67□□□□□ -0.22
HMG20B-204ENST00000417382 C15orf56Q8N910 161 aa13.66□□□□□ -0.22
HMG20B-204ENST00000417382 AP5S1Q9NUS5 200 aa13.66□□□□□ -0.22
HMG20B-204ENST00000417382 CARHSP1Q9Y2V2 147 aaKnown RBP13.66□□□□□ -0.22
HMG20B-204ENST00000417382 FAT1Q14517 4588 aa13.66□□□□□ -0.22
HMG20B-204ENST00000417382 SPANXA1Q9NS26 97 aa13.65□□□□□ -0.22
HMG20B-204ENST00000417382 RAB5AP20339 215 aa13.64□□□□□ -0.23
HMG20B-204ENST00000417382 XCL1P47992 114 aa13.64□□□□□ -0.23
HMG20B-204ENST00000417382 CD164L2Q6UWJ8 174 aa13.64□□□□□ -0.23
HMG20B-204ENST00000417382 CHAC1Q9BUX1 264 aa13.64□□□□□ -0.23
HMG20B-204ENST00000417382 MAP1LC3AQ9H492 121 aa13.64□□□□□ -0.23
HMG20B-204ENST00000417382 GVQW2A0A096LPI5 108 aaPredicted RBP13.63□□□□□ -0.23
HMG20B-204ENST00000417382 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.63□□□□□ -0.23
HMG20B-204ENST00000417382 C1orf196B1AJZ1 125 aa13.63□□□□□ -0.23
HMG20B-204ENST00000417382 RHEBQ15382 184 aa13.63□□□□□ -0.23
HMG20B-204ENST00000417382 S100PP25815 95 aa13.62□□□□□ -0.23
HMG20B-204ENST00000417382 HAMPP81172 84 aa13.62□□□□□ -0.23
HMG20B-204ENST00000417382 MRPS36P82909 103 aaKnown RBP13.62□□□□□ -0.23
HMG20B-204ENST00000417382 Q5VSD8 79 aa13.62□□□□□ -0.23
HMG20B-204ENST00000417382 VPS13BQ7Z7G8 4022 aa13.61□□□□□ -0.23
HMG20B-204ENST00000417382 FAM229AH3BQW9 127 aa13.61□□□□□ -0.23
HMG20B-204ENST00000417382 K7EMI3 77 aa13.61□□□□□ -0.23
HMG20B-204ENST00000417382 SMR3BP02814 79 aaPredicted RBP13.61□□□□□ -0.23
HMG20B-204ENST00000417382 SDIM1Q6ZPB5 146 aa13.61□□□□□ -0.23
HMG20B-204ENST00000417382 Q6ZUT4 128 aa13.61□□□□□ -0.23
HMG20B-204ENST00000417382 SCXQ7RTU7 201 aa13.61□□□□□ -0.23
HMG20B-204ENST00000417382 IGHV1-58A0A0C4DH39 117 aa13.6□□□□□ -0.23
HMG20B-204ENST00000417382 SLPIP03973 132 aa13.6□□□□□ -0.23
HMG20B-204ENST00000417382 RPL39P62891 51 aaKnown RBP13.6□□□□□ -0.23
HMG20B-204ENST00000417382 Q8N8P6 123 aa13.6□□□□□ -0.23
HMG20B-204ENST00000417382 PYGO1Q9Y3Y4 419 aa13.6□□□□□ -0.23
HMG20B-204ENST00000417382 COX19Q49B96 90 aa13.59□□□□□ -0.23
HMG20B-204ENST00000417382 IGHV3-64A0A075B6Q5 118 aa13.58□□□□□ -0.24
HMG20B-204ENST00000417382 FAM104AQ969W3 186 aa13.58□□□□□ -0.24
HMG20B-204ENST00000417382 GNB1LQ9BYB4 327 aa13.58□□□□□ -0.24
HMG20B-204ENST00000417382 LOC389332A0A1B0GUA5 103 aa13.57□□□□□ -0.24
HMG20B-204ENST00000417382 CIRBP-AS1Q8TBR5 109 aa13.57□□□□□ -0.24
HMG20B-204ENST00000417382 NXT2Q9NPJ8 142 aaKnown RBP13.57□□□□□ -0.24
HMG20B-204ENST00000417382 TRAV13-1A0A0B4J241 112 aa13.56□□□□□ -0.24
HMG20B-204ENST00000417382 IFI27P40305 119 aaPredicted RBP13.56□□□□□ -0.24
HMG20B-204ENST00000417382 HIGD2BQ4VC39 106 aa13.56□□□□□ -0.24
HMG20B-204ENST00000417382 ORMDL2Q53FV1 153 aa13.56□□□□□ -0.24
HMG20B-204ENST00000417382 RNASE13Q5GAN3 156 aaKnown RBP13.56□□□□□ -0.24
HMG20B-204ENST00000417382 CIRBPQ14011 172 aaKnown RBP13.55□□□□□ -0.24
HMG20B-204ENST00000417382 RPS10P5Q9NQ39 176 aa13.55□□□□□ -0.24
HMG20B-204ENST00000417382 COX7A2LO14548 114 aa13.54□□□□□ -0.24
HMG20B-204ENST00000417382 MT-ND6P03923 174 aa13.53□□□□□ -0.24
HMG20B-204ENST00000417382 NPSP0C0P6 89 aa13.53□□□□□ -0.24
HMG20B-204ENST00000417382 LINC00528Q8N1L1 170 aa13.53□□□□□ -0.24
HMG20B-204ENST00000417382 CYSLTR1Q9Y271 337 aa13.53□□□□□ -0.24
HMG20B-204ENST00000417382 SRRM2Q9UQ35 2752 aaKnown RBP13.52□□□□□ -0.24
HMG20B-204ENST00000417382 G0S2P27469 103 aa13.52□□□□□ -0.25
HMG20B-204ENST00000417382 NDUFA5Q16718 116 aa13.52□□□□□ -0.25
HMG20B-204ENST00000417382 OPRPNQ99935 248 aaPredicted RBP13.52□□□□□ -0.25
HMG20B-204ENST00000417382 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.52□□□□□ -0.25
HMG20B-204ENST00000417382 PLA2G1BP04054 148 aaKnown RBP13.51□□□□□ -0.25
HMG20B-204ENST00000417382 MALP21145 153 aa13.51□□□□□ -0.25
HMG20B-204ENST00000417382 SVBPQ8N300 66 aa13.51□□□□□ -0.25
HMG20B-204ENST00000417382 PKIGQ9Y2B9 76 aa13.51□□□□□ -0.25
HMG20B-204ENST00000417382 IGLV4-3A0A075B6K6 122 aa13.5□□□□□ -0.25
HMG20B-204ENST00000417382 IFITM10A6NMD0 228 aa13.5□□□□□ -0.25
HMG20B-204ENST00000417382 ZNF561-AS1K7EIQ3 104 aa13.5□□□□□ -0.25
HMG20B-204ENST00000417382 INAFM2P0DMQ5 153 aa13.5□□□□□ -0.25
HMG20B-204ENST00000417382 KIAA1644Q3SXP7 199 aa13.5□□□□□ -0.25
HMG20B-204ENST00000417382 C2orf66Q6UXQ4 117 aa13.5□□□□□ -0.25
HMG20B-204ENST00000417382 TMEM141Q96I45 108 aa13.5□□□□□ -0.25
HMG20B-204ENST00000417382 IGHV3OR16-9A0A0B4J2B5 98 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms