RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 RPL18AQ02543 176 aaKnown RBP3.16□□□□□ -1.9
GTF3AP1-201ENST00000416942 SYCNQ0VAF6 134 aa3.16□□□□□ -1.9
GTF3AP1-201ENST00000416942 NEDD8Q15843 81 aa3.16□□□□□ -1.9
GTF3AP1-201ENST00000416942 ZNF56Q15929 161 aa3.16□□□□□ -1.9
GTF3AP1-201ENST00000416942 LINC00304Q8N9R0 145 aa3.16□□□□□ -1.9
GTF3AP1-201ENST00000416942 AQP10Q96PS8 301 aa3.16□□□□□ -1.9
GTF3AP1-201ENST00000416942 UQCC1Q9NVA1 299 aa3.16□□□□□ -1.9
GTF3AP1-201ENST00000416942 OR5AC2Q9NZP5 309 aa3.16□□□□□ -1.9
GTF3AP1-201ENST00000416942 SCP2D1Q9UJQ7 156 aa3.16□□□□□ -1.9
GTF3AP1-201ENST00000416942 PIGBOS1A0A0B4J2F0 54 aa3.15□□□□□ -1.91
GTF3AP1-201ENST00000416942 IGHV1-24A0A0C4DH33 117 aa3.15□□□□□ -1.91
GTF3AP1-201ENST00000416942 C7orf66A4D0T2 115 aa3.15□□□□□ -1.91
GTF3AP1-201ENST00000416942 GRIFINA4D1Z8 144 aa3.15□□□□□ -1.91
GTF3AP1-201ENST00000416942 ARMS2P0C7Q2 107 aa3.15□□□□□ -1.91
GTF3AP1-201ENST00000416942 FGF6P10767 208 aa3.15□□□□□ -1.91
GTF3AP1-201ENST00000416942 FGF7P21781 194 aa3.15□□□□□ -1.91
GTF3AP1-201ENST00000416942 PPP1R1AQ13522 171 aa3.15□□□□□ -1.91
GTF3AP1-201ENST00000416942 TMEM128Q5BJH2 165 aa3.15□□□□□ -1.91
GTF3AP1-201ENST00000416942 SPANXN2Q5MJ10 180 aa3.15□□□□□ -1.91
GTF3AP1-201ENST00000416942 NDFIP1Q9BT67 221 aa3.15□□□□□ -1.91
GTF3AP1-201ENST00000416942 IL36BQ9NZH7 164 aa3.15□□□□□ -1.91
GTF3AP1-201ENST00000416942 GSKIPQ9P0R6 139 aa3.15□□□□□ -1.91
GTF3AP1-201ENST00000416942 SFT2D2O95562 160 aa3.14□□□□□ -1.91
GTF3AP1-201ENST00000416942 XCL1P47992 114 aa3.14□□□□□ -1.91
GTF3AP1-201ENST00000416942 BCAP31P51572 246 aa3.14□□□□□ -1.91
GTF3AP1-201ENST00000416942 TAS2R30P59541 319 aa3.14□□□□□ -1.91
GTF3AP1-201ENST00000416942 GABARAPL2P60520 117 aa3.14□□□□□ -1.91
GTF3AP1-201ENST00000416942 UBE2BP63146 152 aa3.14□□□□□ -1.91
GTF3AP1-201ENST00000416942 SS18Q15532 418 aa3.14□□□□□ -1.91
GTF3AP1-201ENST00000416942 IQCJQ1A5X6 159 aa3.14□□□□□ -1.91
GTF3AP1-201ENST00000416942 KRTAP13-2Q52LG2 175 aa3.14□□□□□ -1.91
GTF3AP1-201ENST00000416942 SMUG1Q53HV7 270 aa3.14□□□□□ -1.91
GTF3AP1-201ENST00000416942 TMEM97Q5BJF2 176 aa3.14□□□□□ -1.91
GTF3AP1-201ENST00000416942 FAM19A5Q7Z5A7 132 aaPredicted RBP3.14□□□□□ -1.91
GTF3AP1-201ENST00000416942 OTORQ9NRC9 128 aa3.14□□□□□ -1.91
GTF3AP1-201ENST00000416942 TRAV6A0A075B6T7 132 aa3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 A0A087WXM4 84 aa3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 SPRR5A0A1B0GTR4 108 aa3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 B4DEV8 164 aa3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 M0R036 132 aa3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 DEFA3P59666 94 aa3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 KRTAP10-10P60014 251 aa3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 RAB4BP61018 213 aa3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 MEF2BQ02080 365 aaPredicted RBP3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 SSBP1Q04837 148 aaKnown RBP3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 PRNTQ86SH4 94 aa3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 TSKUQ8WUA8 353 aa3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 TMEM243Q9BU79 118 aa3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 MRPS26Q9BYN8 205 aaKnown RBP3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 BATF3Q9NR55 127 aa3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 LYRM2Q9NU23 88 aaPredicted RBP3.13□□□□□ -1.91
GTF3AP1-201ENST00000416942 TMSB15BA0A087X1C1 80 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 IGHV1-58A0A0C4DH39 117 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 ANKRD20A5PA0PJZ0 165 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 L7N2F9 121 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 UBE2L6O14933 153 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 APOMO95445 188 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 TPT1P13693 172 aaKnown RBP3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 VBP1P61758 197 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 NCS1P62166 190 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 IAH1Q2TAA2 248 aaPredicted RBP3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 KRTAP20-1Q3LI63 56 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 KRTAP6-3Q3LI67 103 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 FAM74A1Q5RGS3 127 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 MCFD2Q8NI22 146 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 C15orf40Q8WUR7 153 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 SMIM4Q8WVI0 70 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 NPCDR1Q9BY65 106 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 PSG8Q9UQ74 426 aa3.12□□□□□ -1.91
GTF3AP1-201ENST00000416942 MUC21A0A140T8X8 626 aa3.11□□□□□ -1.91
GTF3AP1-201ENST00000416942 NMUP48645 174 aa3.11□□□□□ -1.91
GTF3AP1-201ENST00000416942 CAMK2N1Q7Z7J9 78 aa3.11□□□□□ -1.91
GTF3AP1-201ENST00000416942 ZFP82Q8N141 532 aa3.11□□□□□ -1.91
GTF3AP1-201ENST00000416942 NUP35Q8NFH5 326 aa3.11□□□□□ -1.91
GTF3AP1-201ENST00000416942 OR5A1Q8NGJ0 315 aa3.11□□□□□ -1.91
GTF3AP1-201ENST00000416942 LSM5Q9Y4Y9 91 aaKnown RBP3.11□□□□□ -1.91
GTF3AP1-201ENST00000416942 CCDC160A6NGH7 325 aa3.1□□□□□ -1.91
GTF3AP1-201ENST00000416942 FABP5P3A8MUU1 101 aa3.1□□□□□ -1.91
GTF3AP1-201ENST00000416942 KRBOX1C9JBD0 128 aa3.1□□□□□ -1.91
GTF3AP1-201ENST00000416942 M0QXV9 152 aa3.1□□□□□ -1.91
GTF3AP1-201ENST00000416942 CCL25O15444 150 aa3.1□□□□□ -1.91
GTF3AP1-201ENST00000416942 RPL12P30050 165 aaKnown RBP3.1□□□□□ -1.91
GTF3AP1-201ENST00000416942 S100A11P31949 105 aa3.1□□□□□ -1.91
GTF3AP1-201ENST00000416942 FLI1Q01543 452 aaPredicted RBP3.1□□□□□ -1.91
GTF3AP1-201ENST00000416942 IL18Q14116 193 aa3.1□□□□□ -1.91
GTF3AP1-201ENST00000416942 Q6ZN92 141 aa3.1□□□□□ -1.91
GTF3AP1-201ENST00000416942 OR5C1Q8NGR4 320 aa3.1□□□□□ -1.91
GTF3AP1-201ENST00000416942 ISOC2Q96AB3 205 aa3.1□□□□□ -1.91
GTF3AP1-201ENST00000416942 CAMK2N2Q96S95 79 aa3.1□□□□□ -1.91
GTF3AP1-201ENST00000416942 IGSF23A1L1A6 192 aa3.09□□□□□ -1.91
GTF3AP1-201ENST00000416942 C9orf170A2RU37 121 aa3.09□□□□□ -1.91
GTF3AP1-201ENST00000416942 RGS5O15539 181 aa3.09□□□□□ -1.91
GTF3AP1-201ENST00000416942 TCRAP04437 139 aa3.09□□□□□ -1.91
GTF3AP1-201ENST00000416942 SULT1A1P50225 295 aa3.09□□□□□ -1.91
GTF3AP1-201ENST00000416942 NKX2-5P52952 324 aaPredicted RBP3.09□□□□□ -1.91
GTF3AP1-201ENST00000416942 TMBIM6P55061 237 aa3.09□□□□□ -1.91
GTF3AP1-201ENST00000416942 MRPS10P82664 201 aaKnown RBP3.09□□□□□ -1.91
GTF3AP1-201ENST00000416942 KHDC3LQ587J8 217 aa3.09□□□□□ -1.91
GTF3AP1-201ENST00000416942 RNASEKQ6P5S7 137 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms