RNA–Protein interactions for RNA: ENST00000416804.1

HLA-DPB1-210, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 1,361 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-210ENST00000416804 TWIST1Q15672 202 aa9.49□□□□□ -0.89
HLA-DPB1-210ENST00000416804 CNFNQ9BYD5 112 aa9.49□□□□□ -0.89
HLA-DPB1-210ENST00000416804 TMA7Q9Y2S6 64 aaKnown RBP9.49□□□□□ -0.89
HLA-DPB1-210ENST00000416804 IGLV4-69A0A075B6H9 119 aa9.48□□□□□ -0.89
HLA-DPB1-210ENST00000416804 IGLV1-50A0A075B6I6 118 aa9.48□□□□□ -0.89
HLA-DPB1-210ENST00000416804 HMSDA8MTL9 139 aa9.48□□□□□ -0.89
HLA-DPB1-210ENST00000416804 APOMO95445 188 aa9.48□□□□□ -0.89
HLA-DPB1-210ENST00000416804 BCL2P10415 239 aa9.48□□□□□ -0.89
HLA-DPB1-210ENST00000416804 EIF5AP63241 154 aaKnown RBP9.48□□□□□ -0.89
HLA-DPB1-210ENST00000416804 EIF5AL1Q6IS14 154 aaKnown RBP9.48□□□□□ -0.89
HLA-DPB1-210ENST00000416804 COMMD7Q86VX2 200 aa9.48□□□□□ -0.89
HLA-DPB1-210ENST00000416804 RPL39LQ96EH5 51 aaKnown RBP9.48□□□□□ -0.89
HLA-DPB1-210ENST00000416804 SDHAF1A6NFY7 115 aa9.47□□□□□ -0.89
HLA-DPB1-210ENST00000416804 G3V3Q6 166 aa9.47□□□□□ -0.89
HLA-DPB1-210ENST00000416804 IGLV7-43P04211 117 aa9.47□□□□□ -0.89
HLA-DPB1-210ENST00000416804 H2AFB1P0C5Y9 115 aa9.47□□□□□ -0.89
HLA-DPB1-210ENST00000416804 GNG4P50150 75 aa9.47□□□□□ -0.89
HLA-DPB1-210ENST00000416804 PRR4Q16378 134 aa9.47□□□□□ -0.89
HLA-DPB1-210ENST00000416804 PHF5AQ7RTV0 110 aaKnown RBP9.47□□□□□ -0.89
HLA-DPB1-210ENST00000416804 NUP35Q8NFH5 326 aa9.47□□□□□ -0.89
HLA-DPB1-210ENST00000416804 MANBALQ9NQG1 85 aa9.47□□□□□ -0.89
HLA-DPB1-210ENST00000416804 BIN3Q9NQY0 253 aa9.47□□□□□ -0.89
HLA-DPB1-210ENST00000416804 KRTAP9-6A0A140TA67 174 aa9.46□□□□□ -0.9
HLA-DPB1-210ENST00000416804 H0Y9J4 135 aa9.46□□□□□ -0.9
HLA-DPB1-210ENST00000416804 CCL20P78556 96 aa9.46□□□□□ -0.9
HLA-DPB1-210ENST00000416804 CAMK2N2Q96S95 79 aa9.46□□□□□ -0.9
HLA-DPB1-210ENST00000416804 I3L3M4 83 aa9.45□□□□□ -0.9
HLA-DPB1-210ENST00000416804 PMCHP20382 165 aa9.45□□□□□ -0.9
HLA-DPB1-210ENST00000416804 MALP21145 153 aa9.45□□□□□ -0.9
HLA-DPB1-210ENST00000416804 SMIM15Q7Z3B0 74 aa9.45□□□□□ -0.9
HLA-DPB1-210ENST00000416804 RAB19A4D1S5 217 aa9.44□□□□□ -0.9
HLA-DPB1-210ENST00000416804 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.44□□□□□ -0.9
HLA-DPB1-210ENST00000416804 ESDP10768 282 aa9.44□□□□□ -0.9
HLA-DPB1-210ENST00000416804 MEF2BQ02080 365 aaPredicted RBP9.44□□□□□ -0.9
HLA-DPB1-210ENST00000416804 RPL18AQ02543 176 aaKnown RBP9.44□□□□□ -0.9
HLA-DPB1-210ENST00000416804 TSKUQ8WUA8 353 aa9.44□□□□□ -0.9
HLA-DPB1-210ENST00000416804 MRAP2Q96G30 205 aa9.44□□□□□ -0.9
HLA-DPB1-210ENST00000416804 C2orf48Q96LS8 159 aa9.44□□□□□ -0.9
HLA-DPB1-210ENST00000416804 CDC42SE2Q9NRR3 84 aa9.44□□□□□ -0.9
HLA-DPB1-210ENST00000416804 GNG13Q9P2W3 67 aa9.44□□□□□ -0.9
HLA-DPB1-210ENST00000416804 COX7A2LO14548 114 aa9.43□□□□□ -0.9
HLA-DPB1-210ENST00000416804 MRPL52Q86TS9 123 aaKnown RBP9.43□□□□□ -0.9
HLA-DPB1-210ENST00000416804 TRBV6-5A0A0K0K1A5 114 aa9.42□□□□□ -0.9
HLA-DPB1-210ENST00000416804 ZNF345Q14585 488 aa9.42□□□□□ -0.9
HLA-DPB1-210ENST00000416804 LCE2AQ5TA79 106 aaPredicted RBP9.42□□□□□ -0.9
HLA-DPB1-210ENST00000416804 A0A087WZ39 114 aa9.41□□□□□ -0.9
HLA-DPB1-210ENST00000416804 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
HLA-DPB1-210ENST00000416804 SMLR1H3BR10 107 aa9.41□□□□□ -0.9
HLA-DPB1-210ENST00000416804 BCL2L11O43521 198 aa9.41□□□□□ -0.9
HLA-DPB1-210ENST00000416804 UBE2D1P51668 147 aa9.41□□□□□ -0.9
HLA-DPB1-210ENST00000416804 NUDT10Q8NFP7 164 aa9.41□□□□□ -0.9
HLA-DPB1-210ENST00000416804 NUDT11Q96G61 164 aa9.41□□□□□ -0.9
HLA-DPB1-210ENST00000416804 TRBV20OR9-2A0A075B6H5 130 aa9.4□□□□□ -0.9
HLA-DPB1-210ENST00000416804 C1orf196B1AJZ1 125 aa9.4□□□□□ -0.9
HLA-DPB1-210ENST00000416804 TSHBP01222 138 aa9.4□□□□□ -0.9
HLA-DPB1-210ENST00000416804 KRTAP1-4P0C5Y4 121 aa9.4□□□□□ -0.9
HLA-DPB1-210ENST00000416804 RPL13AP40429 203 aaKnown RBP9.4□□□□□ -0.9
HLA-DPB1-210ENST00000416804 RNF151Q2KHN1 245 aa9.4□□□□□ -0.9
HLA-DPB1-210ENST00000416804 RPP21Q9H633 154 aaKnown RBP9.4□□□□□ -0.9
HLA-DPB1-210ENST00000416804 TMEM242Q9NWH2 141 aa9.4□□□□□ -0.9
HLA-DPB1-210ENST00000416804 PDE6DO43924 150 aa9.39□□□□□ -0.91
HLA-DPB1-210ENST00000416804 C7orf77A4D0Y5 90 aa9.38□□□□□ -0.91
HLA-DPB1-210ENST00000416804 FOXA3P55318 350 aaPredicted RBP9.38□□□□□ -0.91
HLA-DPB1-210ENST00000416804 UQCC3Q6UW78 93 aa9.38□□□□□ -0.91
HLA-DPB1-210ENST00000416804 OPRPNQ99935 248 aaPredicted RBP9.38□□□□□ -0.91
HLA-DPB1-210ENST00000416804 ST20Q9HBF5 79 aa9.38□□□□□ -0.91
HLA-DPB1-210ENST00000416804 KANTRA0A1W2PQU2 76 aa9.37□□□□□ -0.91
HLA-DPB1-210ENST00000416804 TEX46H3BTG2 121 aa9.37□□□□□ -0.91
HLA-DPB1-210ENST00000416804 SPAG11BQ08648 103 aa9.37□□□□□ -0.91
HLA-DPB1-210ENST00000416804 SMAGPQ0VAQ4 97 aa9.36□□□□□ -0.91
HLA-DPB1-210ENST00000416804 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
HLA-DPB1-210ENST00000416804 IMMP2LQ96T52 175 aa9.36□□□□□ -0.91
HLA-DPB1-210ENST00000416804 RNASE7Q9H1E1 156 aaKnown RBP9.36□□□□□ -0.91
HLA-DPB1-210ENST00000416804 MRPL35Q9NZE8 188 aaKnown RBP9.36□□□□□ -0.91
HLA-DPB1-210ENST00000416804 CSDC2Q9Y534 153 aaKnown RBP9.36□□□□□ -0.91
HLA-DPB1-210ENST00000416804 TRBV27A0A0K0K1C4 114 aa9.35□□□□□ -0.91
HLA-DPB1-210ENST00000416804 F8WDY8 70 aa9.35□□□□□ -0.91
HLA-DPB1-210ENST00000416804 POLR2KP53803 58 aaKnown RBP9.35□□□□□ -0.91
HLA-DPB1-210ENST00000416804 C5orf38Q86SI9 138 aa9.35□□□□□ -0.91
HLA-DPB1-210ENST00000416804 CARHSP1Q9Y2V2 147 aaKnown RBP9.35□□□□□ -0.91
HLA-DPB1-210ENST00000416804 TRAV13-1A0A0B4J241 112 aa9.34□□□□□ -0.91
HLA-DPB1-210ENST00000416804 OR10D4PQ8NGN7 298 aa9.34□□□□□ -0.91
HLA-DPB1-210ENST00000416804 FAM168BA1KXE4 195 aa9.33□□□□□ -0.92
HLA-DPB1-210ENST00000416804 TLX1NBP0CAT3 122 aa9.33□□□□□ -0.92
HLA-DPB1-210ENST00000416804 S100A12P80511 92 aa9.33□□□□□ -0.92
HLA-DPB1-210ENST00000416804 FAM19A5Q7Z5A7 132 aaPredicted RBP9.32□□□□□ -0.92
HLA-DPB1-210ENST00000416804 UBE2D4Q9Y2X8 147 aa9.32□□□□□ -0.92
HLA-DPB1-210ENST00000416804 K7EN84 100 aa9.31□□□□□ -0.92
HLA-DPB1-210ENST00000416804 NDUFA1O15239 70 aa9.31□□□□□ -0.92
HLA-DPB1-210ENST00000416804 FCER1GP30273 86 aa9.31□□□□□ -0.92
HLA-DPB1-210ENST00000416804 RNASE13Q5GAN3 156 aaKnown RBP9.31□□□□□ -0.92
HLA-DPB1-210ENST00000416804 UBE2BP63146 152 aa9.3□□□□□ -0.92
HLA-DPB1-210ENST00000416804 CTAG1AP78358 180 aa9.3□□□□□ -0.92
HLA-DPB1-210ENST00000416804 TMEM241Q24JQ0 296 aa9.3□□□□□ -0.92
HLA-DPB1-210ENST00000416804 OCC1Q8TAD7 63 aa9.3□□□□□ -0.92
HLA-DPB1-210ENST00000416804 ORAOV1Q8WV07 137 aa9.3□□□□□ -0.92
HLA-DPB1-210ENST00000416804 A8MWL6 223 aa9.29□□□□□ -0.92
HLA-DPB1-210ENST00000416804 M0QXV9 152 aa9.29□□□□□ -0.92
HLA-DPB1-210ENST00000416804 VCYO14598 125 aa9.29□□□□□ -0.92
HLA-DPB1-210ENST00000416804 BORCS7Q96B45 105 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms