RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 BORCS7Q96B45 105 aa9.06□□□□□ -0.96
PAF1-202ENST00000416728 LINC00474Q9P2X8 69 aa9.06□□□□□ -0.96
PAF1-202ENST00000416728 IGHV1-58A0A0C4DH39 117 aa9.05□□□□□ -0.96
PAF1-202ENST00000416728 LINC00959A0A1B0GUT2 108 aa9.05□□□□□ -0.96
PAF1-202ENST00000416728 LINC00862A6NCI5 91 aa9.05□□□□□ -0.96
PAF1-202ENST00000416728 MRAP2Q96G30 205 aa9.05□□□□□ -0.96
PAF1-202ENST00000416728 ST20Q9HBF5 79 aa9.05□□□□□ -0.96
PAF1-202ENST00000416728 TSHBP01222 138 aa9.04□□□□□ -0.96
PAF1-202ENST00000416728 ESDP10768 282 aa9.04□□□□□ -0.96
PAF1-202ENST00000416728 CT83Q5H943 113 aa9.04□□□□□ -0.96
PAF1-202ENST00000416728 CARD19Q96LW7 228 aa9.04□□□□□ -0.96
PAF1-202ENST00000416728 TMEM242Q9NWH2 141 aa9.04□□□□□ -0.96
PAF1-202ENST00000416728 GAS8-AS1O95177 125 aa9.03□□□□□ -0.96
PAF1-202ENST00000416728 CEBPGP53567 150 aa9.03□□□□□ -0.96
PAF1-202ENST00000416728 SS18Q15532 418 aa9.03□□□□□ -0.96
PAF1-202ENST00000416728 LINC00526Q96FQ7 95 aa9.03□□□□□ -0.96
PAF1-202ENST00000416728 LINC01600Q96MT4 127 aa9.03□□□□□ -0.96
PAF1-202ENST00000416728 BLOC1S1P78537 153 aa9.02□□□□□ -0.97
PAF1-202ENST00000416728 S100A12P80511 92 aa9.02□□□□□ -0.97
PAF1-202ENST00000416728 A0A1B0GUT8 65 aa9.01□□□□□ -0.97
PAF1-202ENST00000416728 ZNF561-AS1K7EIQ3 104 aa9.01□□□□□ -0.97
PAF1-202ENST00000416728 CD164L2Q6UWJ8 174 aa9.01□□□□□ -0.97
PAF1-202ENST00000416728 MRPL52Q86TS9 123 aaKnown RBP9.01□□□□□ -0.97
PAF1-202ENST00000416728 TMEM191AQ9H0A3 160 aa9.01□□□□□ -0.97
PAF1-202ENST00000416728 CDC42SE2Q9NRR3 84 aa9.01□□□□□ -0.97
PAF1-202ENST00000416728 TRBV27A0A0K0K1C4 114 aa9□□□□□ -0.97
PAF1-202ENST00000416728 C7orf77A4D0Y5 90 aa9□□□□□ -0.97
PAF1-202ENST00000416728 HIGD1CA8MV81 97 aa9□□□□□ -0.97
PAF1-202ENST00000416728 POLR2KP53803 58 aaKnown RBP9□□□□□ -0.97
PAF1-202ENST00000416728 SYCNQ0VAF6 134 aa9□□□□□ -0.97
PAF1-202ENST00000416728 ALKAL2Q6UX46 152 aa9□□□□□ -0.97
PAF1-202ENST00000416728 ZNF664Q8N3J9 261 aa9□□□□□ -0.97
PAF1-202ENST00000416728 TSKUQ8WUA8 353 aa9□□□□□ -0.97
PAF1-202ENST00000416728 SPINK6Q6UWN8 80 aa8.99□□□□□ -0.97
PAF1-202ENST00000416728 SMIM7Q9BQ49 75 aa8.99□□□□□ -0.97
PAF1-202ENST00000416728 RAB4AP20338 218 aa8.99□□□□□ -0.97
PAF1-202ENST00000416728 CAMPP49913 170 aa8.99□□□□□ -0.97
PAF1-202ENST00000416728 REG3GQ6UW15 175 aa8.99□□□□□ -0.97
PAF1-202ENST00000416728 LINC01551Q86U37 167 aa8.99□□□□□ -0.97
PAF1-202ENST00000416728 AMN1Q8IY45 258 aa8.99□□□□□ -0.97
PAF1-202ENST00000416728 LINC00469Q8N7U9 141 aa8.99□□□□□ -0.97
PAF1-202ENST00000416728 A0A0J9YXV3 536 aa8.98□□□□□ -0.97
PAF1-202ENST00000416728 MALP21145 153 aa8.98□□□□□ -0.97
PAF1-202ENST00000416728 FCER1GP30273 86 aa8.98□□□□□ -0.97
PAF1-202ENST00000416728 Q6ZRP5 223 aa8.98□□□□□ -0.97
PAF1-202ENST00000416728 ISOC2Q96AB3 205 aa8.98□□□□□ -0.97
PAF1-202ENST00000416728 EIF5A2Q9GZV4 153 aaKnown RBP8.98□□□□□ -0.97
PAF1-202ENST00000416728 C1orf196B1AJZ1 125 aa8.97□□□□□ -0.97
PAF1-202ENST00000416728 VCYO14598 125 aa8.97□□□□□ -0.97
PAF1-202ENST00000416728 PTTG1IPP53801 180 aa8.97□□□□□ -0.97
PAF1-202ENST00000416728 SMAGPQ0VAQ4 97 aa8.97□□□□□ -0.97
PAF1-202ENST00000416728 OSTCQ9NRP0 149 aa8.97□□□□□ -0.97
PAF1-202ENST00000416728 IGLV4-69A0A075B6H9 119 aa8.96□□□□□ -0.98
PAF1-202ENST00000416728 LOC107984640A0A0U1RRK4 108 aa8.96□□□□□ -0.98
PAF1-202ENST00000416728 ZNF727A8MUV8 499 aa8.96□□□□□ -0.98
PAF1-202ENST00000416728 SMKR1H3BMG3 65 aa8.96□□□□□ -0.98
PAF1-202ENST00000416728 COX7A2LO14548 114 aa8.96□□□□□ -0.98
PAF1-202ENST00000416728 GAGE2BQ13066 116 aa8.96□□□□□ -0.98
PAF1-202ENST00000416728 RIGQ13278 110 aa8.96□□□□□ -0.98
PAF1-202ENST00000416728 LINC00518Q8N0U6 118 aa8.96□□□□□ -0.98
PAF1-202ENST00000416728 TNXBP22105 4242 aa8.96□□□□□ -0.98
PAF1-202ENST00000416728 PPP1R17O96001 155 aa8.95□□□□□ -0.98
PAF1-202ENST00000416728 SRSF9Q13242 221 aaKnown RBP eCLIP8.95□□□□□ -0.98
PAF1-202ENST00000416728 ODF1Q14990 250 aa8.95□□□□□ -0.98
PAF1-202ENST00000416728 KIR2DL4Q99706 377 aa8.95□□□□□ -0.98
PAF1-202ENST00000416728 UBE2D4Q9Y2X8 147 aa8.95□□□□□ -0.98
PAF1-202ENST00000416728 CSDC2Q9Y534 153 aaKnown RBP8.95□□□□□ -0.98
PAF1-202ENST00000416728 TRAV13-1A0A0B4J241 112 aa8.94□□□□□ -0.98
PAF1-202ENST00000416728 KRTAP10-8P60410 259 aa8.94□□□□□ -0.98
PAF1-202ENST00000416728 SUMO2P61956 95 aaKnown RBP8.94□□□□□ -0.98
PAF1-202ENST00000416728 RNASE13Q5GAN3 156 aaKnown RBP8.94□□□□□ -0.98
PAF1-202ENST00000416728 CLLU1Q5K131 121 aa8.94□□□□□ -0.98
PAF1-202ENST00000416728 NUP35Q8NFH5 326 aa8.94□□□□□ -0.98
PAF1-202ENST00000416728 CAMK2N2Q96S95 79 aa8.94□□□□□ -0.98
PAF1-202ENST00000416728 APOMO95445 188 aa8.93□□□□□ -0.98
PAF1-202ENST00000416728 NRACQ8N912 160 aa8.93□□□□□ -0.98
PAF1-202ENST00000416728 V9GYV3 84 aa8.93□□□□□ -0.98
PAF1-202ENST00000416728 LRP2P98164 4655 aa8.93□□□□□ -0.98
PAF1-202ENST00000416728 PPP1R2P9O14990 202 aa8.92□□□□□ -0.98
PAF1-202ENST00000416728 TMEM18Q96B42 140 aa8.92□□□□□ -0.98
PAF1-202ENST00000416728 A0A1W2PNN7 141 aa8.91□□□□□ -0.98
PAF1-202ENST00000416728 SRP19P09132 144 aaKnown RBP8.91□□□□□ -0.98
PAF1-202ENST00000416728 Q6ZUT4 128 aa8.91□□□□□ -0.98
PAF1-202ENST00000416728 C5orf38Q86SI9 138 aa8.91□□□□□ -0.98
PAF1-202ENST00000416728 C2orf48Q96LS8 159 aa8.91□□□□□ -0.98
PAF1-202ENST00000416728 NAT8BQ9UHF3 227 aa8.91□□□□□ -0.98
PAF1-202ENST00000416728 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.9□□□□□ -0.98
PAF1-202ENST00000416728 S100A6P06703 90 aa8.9□□□□□ -0.98
PAF1-202ENST00000416728 RPL18AQ02543 176 aaKnown RBP8.9□□□□□ -0.98
PAF1-202ENST00000416728 SPAG11BQ08648 103 aa8.9□□□□□ -0.98
PAF1-202ENST00000416728 C9orf116Q5BN46 136 aaPredicted RBP8.9□□□□□ -0.98
PAF1-202ENST00000416728 TIMM21Q9BVV7 248 aa8.9□□□□□ -0.98
PAF1-202ENST00000416728 MRPL51Q4U2R6 128 aaKnown RBP8.89□□□□□ -0.99
PAF1-202ENST00000416728 FAM104BQ5XKR9 115 aa8.89□□□□□ -0.99
PAF1-202ENST00000416728 COMMD7Q86VX2 200 aa8.89□□□□□ -0.99
PAF1-202ENST00000416728 MT-ND6P03923 174 aa8.88□□□□□ -0.99
PAF1-202ENST00000416728 TMEM241Q24JQ0 296 aa8.88□□□□□ -0.99
PAF1-202ENST00000416728 C20orf78Q9BR46 151 aa8.88□□□□□ -0.99
PAF1-202ENST00000416728 PSORS1C2Q9UIG4 136 aa8.88□□□□□ -0.99
PAF1-202ENST00000416728 TCAPO15273 167 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms