RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 COX19Q49B96 90 aa8.61□□□□□ -1.03
LINC01398-201ENST00000416581 TMEM243Q9BU79 118 aa8.61□□□□□ -1.03
LINC01398-201ENST00000416581 HMCN2Q8NDA2 5059 aa8.6□□□□□ -1.03
LINC01398-201ENST00000416581 TRBV24-1A0A075B6N3 115 aa8.6□□□□□ -1.03
LINC01398-201ENST00000416581 IGHV3-64A0A075B6Q5 118 aa8.6□□□□□ -1.03
LINC01398-201ENST00000416581 UBE2L6O14933 153 aa8.6□□□□□ -1.03
LINC01398-201ENST00000416581 MRPL51Q4U2R6 128 aaKnown RBP8.6□□□□□ -1.03
LINC01398-201ENST00000416581 CLPSL2Q6UWE3 100 aa8.6□□□□□ -1.03
LINC01398-201ENST00000416581 Q6ZRU5 148 aa8.6□□□□□ -1.03
LINC01398-201ENST00000416581 SMCO4Q9NRQ5 59 aa8.6□□□□□ -1.03
LINC01398-201ENST00000416581 hDV102S1A0JD36 115 aa8.59□□□□□ -1.03
LINC01398-201ENST00000416581 PPP1R17O96001 155 aa8.59□□□□□ -1.03
LINC01398-201ENST00000416581 CIRBPQ14011 172 aaKnown RBP8.59□□□□□ -1.03
LINC01398-201ENST00000416581 CFAP161Q6P656 301 aa8.59□□□□□ -1.03
LINC01398-201ENST00000416581 KRTAP26-1Q6PEX3 210 aa8.59□□□□□ -1.03
LINC01398-201ENST00000416581 TMEM136Q6ZRR5 245 aa8.59□□□□□ -1.03
LINC01398-201ENST00000416581 RPL39LQ96EH5 51 aaKnown RBP8.59□□□□□ -1.03
LINC01398-201ENST00000416581 GNB1LQ9BYB4 327 aa8.59□□□□□ -1.03
LINC01398-201ENST00000416581 PKIGQ9Y2B9 76 aa8.59□□□□□ -1.03
LINC01398-201ENST00000416581 TGIF2-C20orf24A0A0A6YYL0 155 aa8.58□□□□□ -1.04
LINC01398-201ENST00000416581 TRBV6-5A0A0K0K1A5 114 aa8.58□□□□□ -1.04
LINC01398-201ENST00000416581 PPBPP02775 128 aa8.58□□□□□ -1.04
LINC01398-201ENST00000416581 CKS2P33552 79 aa8.58□□□□□ -1.04
LINC01398-201ENST00000416581 COTL1Q14019 142 aa8.58□□□□□ -1.04
LINC01398-201ENST00000416581 SDIM1Q6ZPB5 146 aa8.58□□□□□ -1.04
LINC01398-201ENST00000416581 YPEL4Q96NS1 127 aa8.58□□□□□ -1.04
LINC01398-201ENST00000416581 SMKR1H3BMG3 65 aa8.57□□□□□ -1.04
LINC01398-201ENST00000416581 GAS8-AS1O95177 125 aa8.57□□□□□ -1.04
LINC01398-201ENST00000416581 NCR2O95944 276 aa8.57□□□□□ -1.04
LINC01398-201ENST00000416581 MT-ND6P03923 174 aa8.57□□□□□ -1.04
LINC01398-201ENST00000416581 S100A1P23297 94 aa8.57□□□□□ -1.04
LINC01398-201ENST00000416581 RPS10P46783 165 aaKnown RBP8.57□□□□□ -1.04
LINC01398-201ENST00000416581 CBLN2Q8IUK8 224 aa8.57□□□□□ -1.04
LINC01398-201ENST00000416581 NRACQ8N912 160 aa8.57□□□□□ -1.04
LINC01398-201ENST00000416581 C20orf203Q8NBC4 194 aa8.57□□□□□ -1.04
LINC01398-201ENST00000416581 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.57□□□□□ -1.04
LINC01398-201ENST00000416581 D6R8Y8 96 aa8.56□□□□□ -1.04
LINC01398-201ENST00000416581 ATP6V1G1O75348 118 aa8.56□□□□□ -1.04
LINC01398-201ENST00000416581 AMTP48728 403 aa8.56□□□□□ -1.04
LINC01398-201ENST00000416581 ORMDL3Q8N138 153 aa8.56□□□□□ -1.04
LINC01398-201ENST00000416581 ST20Q9HBF5 79 aa8.56□□□□□ -1.04
LINC01398-201ENST00000416581 IGLV10-54A0A075B6I4 117 aa8.55□□□□□ -1.04
LINC01398-201ENST00000416581 SDHAF1A6NFY7 115 aa8.55□□□□□ -1.04
LINC01398-201ENST00000416581 PHOX2AO14813 284 aa8.55□□□□□ -1.04
LINC01398-201ENST00000416581 C7orf33Q8WU49 177 aa8.55□□□□□ -1.04
LINC01398-201ENST00000416581 DPH3Q96FX2 82 aa8.55□□□□□ -1.04
LINC01398-201ENST00000416581 C20orf78Q9BR46 151 aa8.55□□□□□ -1.04
LINC01398-201ENST00000416581 LAMTOR2Q9Y2Q5 125 aa8.55□□□□□ -1.04
LINC01398-201ENST00000416581 H7C423 109 aa8.54□□□□□ -1.04
LINC01398-201ENST00000416581 TNFRSF6BO95407 300 aa8.54□□□□□ -1.04
LINC01398-201ENST00000416581 APCSP02743 223 aa8.54□□□□□ -1.04
LINC01398-201ENST00000416581 POLR2KP53803 58 aaKnown RBP8.54□□□□□ -1.04
LINC01398-201ENST00000416581 SUMO2P61956 95 aaKnown RBP8.54□□□□□ -1.04
LINC01398-201ENST00000416581 PRELID3AQ96N28 172 aa8.54□□□□□ -1.04
LINC01398-201ENST00000416581 I3L3M4 83 aa8.53□□□□□ -1.04
LINC01398-201ENST00000416581 RPL32P62910 135 aaKnown RBP8.53□□□□□ -1.04
LINC01398-201ENST00000416581 SPACA4Q8TDM5 124 aa8.53□□□□□ -1.04
LINC01398-201ENST00000416581 MRPL18Q9H0U6 180 aaKnown RBP8.53□□□□□ -1.04
LINC01398-201ENST00000416581 IGLV4-60A0A075B6I1 120 aa8.52□□□□□ -1.05
LINC01398-201ENST00000416581 TRBV27A0A0K0K1C4 114 aa8.52□□□□□ -1.05
LINC01398-201ENST00000416581 VCYO14598 125 aa8.52□□□□□ -1.05
LINC01398-201ENST00000416581 NPYP01303 97 aa8.52□□□□□ -1.05
LINC01398-201ENST00000416581 PMCHP20382 165 aa8.52□□□□□ -1.05
LINC01398-201ENST00000416581 AMMECR1LQ6DCA0 310 aa8.52□□□□□ -1.05
LINC01398-201ENST00000416581 PLAC8Q9NZF1 115 aa8.52□□□□□ -1.05
LINC01398-201ENST00000416581 TRAPPC1Q9Y5R8 145 aa8.52□□□□□ -1.05
LINC01398-201ENST00000416581 A0A087WYN8 130 aa8.51□□□□□ -1.05
LINC01398-201ENST00000416581 SCO1O75880 301 aa8.51□□□□□ -1.05
LINC01398-201ENST00000416581 HNRNPA3P51991 378 aaKnown RBP8.51□□□□□ -1.05
LINC01398-201ENST00000416581 FABP9Q0Z7S8 132 aa8.51□□□□□ -1.05
LINC01398-201ENST00000416581 KIAA1644Q3SXP7 199 aa8.51□□□□□ -1.05
LINC01398-201ENST00000416581 LINC00474Q9P2X8 69 aa8.51□□□□□ -1.05
LINC01398-201ENST00000416581 LRP1Q07954 4544 aaKnown RBP8.51□□□□□ -1.05
LINC01398-201ENST00000416581 PRSS47A8MTI9 375 aa8.5□□□□□ -1.05
LINC01398-201ENST00000416581 PANO1I0J062 215 aa8.5□□□□□ -1.05
LINC01398-201ENST00000416581 ZNF25P17030 456 aaPredicted RBP8.5□□□□□ -1.05
LINC01398-201ENST00000416581 SMIM2Q9BVW6 85 aa8.5□□□□□ -1.05
LINC01398-201ENST00000416581 MAP1LC3AQ9H492 121 aa8.5□□□□□ -1.05
LINC01398-201ENST00000416581 COLCA2A8K830 154 aa8.49□□□□□ -1.05
LINC01398-201ENST00000416581 TCAPO15273 167 aa8.49□□□□□ -1.05
LINC01398-201ENST00000416581 KIR2DL4Q99706 377 aa8.49□□□□□ -1.05
LINC01398-201ENST00000416581 ALKBH7Q9BT30 221 aaPredicted RBP8.49□□□□□ -1.05
LINC01398-201ENST00000416581 GAGE12HA6NDE8 117 aa8.48□□□□□ -1.05
LINC01398-201ENST00000416581 TSHBP01222 138 aa8.48□□□□□ -1.05
LINC01398-201ENST00000416581 C15orf56Q8N910 161 aa8.48□□□□□ -1.05
LINC01398-201ENST00000416581 FAT3Q8TDW7 4589 aa8.48□□□□□ -1.05
LINC01398-201ENST00000416581 GVQW2A0A096LPI5 108 aaPredicted RBP8.47□□□□□ -1.05
LINC01398-201ENST00000416581 MT1HL1P0DM35 61 aa8.47□□□□□ -1.05
LINC01398-201ENST00000416581 RAB5AP20339 215 aa8.47□□□□□ -1.05
LINC01398-201ENST00000416581 FCER1GP30273 86 aa8.47□□□□□ -1.05
LINC01398-201ENST00000416581 RNASEKQ6P5S7 137 aaKnown RBP8.47□□□□□ -1.05
LINC01398-201ENST00000416581 CHCHD10Q8WYQ3 142 aaPredicted RBP8.47□□□□□ -1.05
LINC01398-201ENST00000416581 TMEM101Q96IK0 257 aa8.47□□□□□ -1.05
LINC01398-201ENST00000416581 LOC389332A0A1B0GUA5 103 aa8.46□□□□□ -1.06
LINC01398-201ENST00000416581 ESDP10768 282 aa8.46□□□□□ -1.06
LINC01398-201ENST00000416581 Q8N8P6 123 aa8.46□□□□□ -1.06
LINC01398-201ENST00000416581 OR5A1Q8NGJ0 315 aa8.46□□□□□ -1.06
LINC01398-201ENST00000416581 NXT2Q9NPJ8 142 aaKnown RBP8.46□□□□□ -1.06
LINC01398-201ENST00000416581 IGKV3OR2-268A0A0C4DH90 116 aa8.45□□□□□ -1.06
LINC01398-201ENST00000416581 K7EMI3 77 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms