RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 GNGT2O14610 69 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 S100A4P26447 101 aaKnown RBP0.71□□□□□ -2.3
LINC00428-201ENST00000415620 RPL12P30050 165 aaKnown RBP0.71□□□□□ -2.3
LINC00428-201ENST00000415620 FOXA3P55318 350 aaPredicted RBP0.71□□□□□ -2.3
LINC00428-201ENST00000415620 TMEM241Q24JQ0 296 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 C10orf91Q5T1B1 145 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 C9orf153Q5TBE3 101 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 C2orf82Q6UX34 121 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 OR51S1Q8NGJ8 323 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 DNAJC9Q8WXX5 260 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 FUNDC2Q9BWH2 189 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 GNB1LQ9BYB4 327 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 SLIRPQ9GZT3 109 aaKnown RBP0.71□□□□□ -2.3
LINC00428-201ENST00000415620 ATG5Q9H1Y0 275 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 C11orf1Q9H5F2 150 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 TREM1Q9NP99 234 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 RHBDL2Q9NX52 303 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 TIMM9Q9Y5J7 89 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 LENEPQ9Y5L5 61 aa0.71□□□□□ -2.3
LINC00428-201ENST00000415620 ZNF706Q9Y5V0 76 aaPredicted RBP0.71□□□□□ -2.3
LINC00428-201ENST00000415620 TRAV34A0A0B4J273 112 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 A0A0J9YXY3 114 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 ZNF727A8MUV8 499 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 RGS16O15492 202 aaPredicted RBP0.7□□□□□ -2.3
LINC00428-201ENST00000415620 UPK1BO75841 260 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 ERC2-IT1O76042 136 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 GCGP01275 180 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 PMP2P02689 132 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 ARMS2P0C7Q2 107 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 IAPPP10997 89 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 MT1GP13640 62 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 MAPK3P27361 379 aaPredicted RBP0.7□□□□□ -2.3
LINC00428-201ENST00000415620 GABARAPL2P60520 117 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 RAB11AP62491 216 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 MXD1Q05195 221 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 PDE6HQ13956 83 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 C10orf113Q5VZT2 155 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 IFT20Q8IY31 132 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 MYCBPQ99417 103 aaPredicted RBP0.7□□□□□ -2.3
LINC00428-201ENST00000415620 SLC25A21Q9BQT8 299 aaPredicted RBP0.7□□□□□ -2.3
LINC00428-201ENST00000415620 EIF5A2Q9GZV4 153 aaKnown RBP0.7□□□□□ -2.3
LINC00428-201ENST00000415620 EFCAB1Q9HAE3 211 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 FGFR1OP2Q9NVK5 253 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 TMEM242Q9NWH2 141 aa0.7□□□□□ -2.3
LINC00428-201ENST00000415620 TRBV30A0A0K0K1B3 111 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 C3orf85A0A1B0GTC6 90 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 IRGMA1A4Y4 181 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 GRIFINA4D1Z8 144 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 H3BP45 60 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 WRBO00258 174 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 UCHL1P09936 223 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 RRAS2P62070 204 aaPredicted RBP0.69□□□□□ -2.3
LINC00428-201ENST00000415620 SELENOTP62341 195 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 KIAA0087Q14695 138 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 RNASE13Q5GAN3 156 aaKnown RBP0.69□□□□□ -2.3
LINC00428-201ENST00000415620 SLC25A34Q6PIV7 304 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 S100A7AQ86SG5 101 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 PRNTQ86SH4 94 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 MTURNQ8N3F0 131 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 OR5C1Q8NGR4 320 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 SMCR5Q8TEV8 140 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 BTF3L4Q96K17 158 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 GABARAPL3Q9BY60 117 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 RABL2AQ9UBK7 228 aaPredicted RBP0.69□□□□□ -2.3
LINC00428-201ENST00000415620 RABL2BQ9UNT1 228 aa0.69□□□□□ -2.3
LINC00428-201ENST00000415620 A0A096LNJ9 63 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 IGHV3OR16-9A0A0B4J2B5 98 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 A8MUU9 505 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 F8WDY8 70 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 K7EQM0 130 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 GOSR2O14653 212 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 CASQ2O14958 399 aaPredicted RBP0.68□□□□□ -2.3
LINC00428-201ENST00000415620 OR5AL1P0C617 328 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 SULT1A3P0DMM9 295 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 SULT1A4P0DMN0 295 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 S100GP29377 79 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 DEFA1P59665 94 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 RANP62826 216 aaKnown RBP0.68□□□□□ -2.3
LINC00428-201ENST00000415620 ARL6IP1Q15041 203 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 GOLT1AQ6ZVE7 132 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 AHSA2Q719I0 299 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 PCP2Q8IVA1 136 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 SELENOHQ8IZQ5 122 aaKnown RBP0.68□□□□□ -2.3
LINC00428-201ENST00000415620 HYLS1Q96M11 299 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 Q96NJ1 140 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 SLC25A2Q9BXI2 301 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 TMEM14CQ9P0S9 112 aa0.68□□□□□ -2.3
LINC00428-201ENST00000415620 TMSB15BA0A087X1C1 80 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 MUC21A0A140T8X8 626 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 SMIM30A4D0T7 59 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 SNTNA6NMZ2 147 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 C1orf196B1AJZ1 125 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 HMGB1P1B2RPK0 211 aaPredicted RBP0.67□□□□□ -2.3
LINC00428-201ENST00000415620 B4DEV8 164 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 E9PLD3 99 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 M0QY20 66 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 EDF1O60869 148 aaKnown RBP0.67□□□□□ -2.3
LINC00428-201ENST00000415620 ARL6IP5O75915 188 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 NBEAP1P0C6P0 100 aa0.67□□□□□ -2.3
LINC00428-201ENST00000415620 TPT1P13693 172 aaKnown RBP0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms