RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 MAJINQ3KP22 176 aa9.84□□□□□ -0.83
ACTB-202ENST00000414620 SERTAD4-AS1Q5TG53 156 aa9.84□□□□□ -0.83
ACTB-202ENST00000414620 OSTCQ9NRP0 149 aa9.84□□□□□ -0.83
ACTB-202ENST00000414620 LINC00959A0A1B0GUT2 108 aa9.83□□□□□ -0.84
ACTB-202ENST00000414620 PHOX2AO14813 284 aa9.83□□□□□ -0.84
ACTB-202ENST00000414620 NDUFS6O75380 124 aaKnown RBP9.83□□□□□ -0.84
ACTB-202ENST00000414620 V9GYV3 84 aa9.83□□□□□ -0.84
ACTB-202ENST00000414620 POLR2KP53803 58 aaKnown RBP9.82□□□□□ -0.84
ACTB-202ENST00000414620 PLAC8Q9NZF1 115 aa9.82□□□□□ -0.84
ACTB-202ENST00000414620 A0A096LNI7 61 aa9.81□□□□□ -0.84
ACTB-202ENST00000414620 C7orf77A4D0Y5 90 aa9.81□□□□□ -0.84
ACTB-202ENST00000414620 RIGQ13278 110 aa9.81□□□□□ -0.84
ACTB-202ENST00000414620 NUP35Q8NFH5 326 aa9.81□□□□□ -0.84
ACTB-202ENST00000414620 ISOC2Q96AB3 205 aa9.81□□□□□ -0.84
ACTB-202ENST00000414620 IGHV1-58A0A0C4DH39 117 aa9.8□□□□□ -0.84
ACTB-202ENST00000414620 TRBV27A0A0K0K1C4 114 aa9.8□□□□□ -0.84
ACTB-202ENST00000414620 SS18Q15532 418 aa9.8□□□□□ -0.84
ACTB-202ENST00000414620 STPG4Q8N801 248 aa9.8□□□□□ -0.84
ACTB-202ENST00000414620 C7orf33Q8WU49 177 aa9.8□□□□□ -0.84
ACTB-202ENST00000414620 CDC42SE2Q9NRR3 84 aa9.8□□□□□ -0.84
ACTB-202ENST00000414620 PLA2G2DQ9UNK4 145 aa9.8□□□□□ -0.84
ACTB-202ENST00000414620 A0A1B0GVG6 124 aa9.79□□□□□ -0.84
ACTB-202ENST00000414620 FCER1GP30273 86 aa9.79□□□□□ -0.84
ACTB-202ENST00000414620 RPL23P62829 140 aaKnown RBP9.79□□□□□ -0.84
ACTB-202ENST00000414620 ADIRFQ15847 76 aa9.79□□□□□ -0.84
ACTB-202ENST00000414620 RNASE13Q5GAN3 156 aaKnown RBP9.79□□□□□ -0.84
ACTB-202ENST00000414620 Q6ZRU5 148 aa9.79□□□□□ -0.84
ACTB-202ENST00000414620 MRPL52Q86TS9 123 aaKnown RBP9.79□□□□□ -0.84
ACTB-202ENST00000414620 ZNF664Q8N3J9 261 aa9.79□□□□□ -0.84
ACTB-202ENST00000414620 MT1HL1P0DM35 61 aa9.78□□□□□ -0.84
ACTB-202ENST00000414620 TMEM241Q24JQ0 296 aa9.78□□□□□ -0.84
ACTB-202ENST00000414620 NRACQ8N912 160 aa9.78□□□□□ -0.84
ACTB-202ENST00000414620 CARD19Q96LW7 228 aa9.78□□□□□ -0.84
ACTB-202ENST00000414620 NAT8BQ9UHF3 227 aa9.78□□□□□ -0.84
ACTB-202ENST00000414620 C9JQL5 133 aa9.77□□□□□ -0.85
ACTB-202ENST00000414620 VCYO14598 125 aa9.77□□□□□ -0.85
ACTB-202ENST00000414620 SUMO2P61956 95 aaKnown RBP9.77□□□□□ -0.85
ACTB-202ENST00000414620 CD164L2Q6UWJ8 174 aa9.77□□□□□ -0.85
ACTB-202ENST00000414620 CAMPP49913 170 aa9.76□□□□□ -0.85
ACTB-202ENST00000414620 MRPL51Q4U2R6 128 aaKnown RBP9.76□□□□□ -0.85
ACTB-202ENST00000414620 UBE2D4Q9Y2X8 147 aa9.76□□□□□ -0.85
ACTB-202ENST00000414620 ZNF561-AS1K7EIQ3 104 aa9.75□□□□□ -0.85
ACTB-202ENST00000414620 PRR3P79522 188 aaKnown RBP9.75□□□□□ -0.85
ACTB-202ENST00000414620 SRSF3P84103 164 aaKnown RBP9.75□□□□□ -0.85
ACTB-202ENST00000414620 Q6ZUT4 128 aa9.75□□□□□ -0.85
ACTB-202ENST00000414620 NAT8Q9UHE5 227 aa9.75□□□□□ -0.85
ACTB-202ENST00000414620 HMCN2Q8NDA2 5059 aa9.75□□□□□ -0.85
ACTB-202ENST00000414620 SYCNQ0VAF6 134 aa9.74□□□□□ -0.85
ACTB-202ENST00000414620 FAM74A3Q4VXF1 159 aa9.74□□□□□ -0.85
ACTB-202ENST00000414620 FAM104BQ5XKR9 115 aa9.74□□□□□ -0.85
ACTB-202ENST00000414620 KIR2DL4Q99706 377 aa9.74□□□□□ -0.85
ACTB-202ENST00000414620 IGLV4-69A0A075B6H9 119 aa9.73□□□□□ -0.85
ACTB-202ENST00000414620 TRAV13-1A0A0B4J241 112 aa9.73□□□□□ -0.85
ACTB-202ENST00000414620 SMIM27A0A1W2PRY6 76 aa9.73□□□□□ -0.85
ACTB-202ENST00000414620 PPP1R2P9O14990 202 aa9.73□□□□□ -0.85
ACTB-202ENST00000414620 PPP1R17O96001 155 aa9.73□□□□□ -0.85
ACTB-202ENST00000414620 MALP21145 153 aa9.73□□□□□ -0.85
ACTB-202ENST00000414620 MRPL54Q6P161 138 aaKnown RBP9.72□□□□□ -0.85
ACTB-202ENST00000414620 PKIGQ9Y2B9 76 aa9.72□□□□□ -0.85
ACTB-202ENST00000414620 C1orf196B1AJZ1 125 aa9.71□□□□□ -0.86
ACTB-202ENST00000414620 COX7A2LO14548 114 aa9.71□□□□□ -0.86
ACTB-202ENST00000414620 CKS2P33552 79 aa9.71□□□□□ -0.86
ACTB-202ENST00000414620 SMAGPQ0VAQ4 97 aa9.71□□□□□ -0.86
ACTB-202ENST00000414620 GAGE2BQ13066 116 aa9.71□□□□□ -0.86
ACTB-202ENST00000414620 PEA15Q15121 130 aa9.71□□□□□ -0.86
ACTB-202ENST00000414620 C5orf38Q86SI9 138 aa9.71□□□□□ -0.86
ACTB-202ENST00000414620 LINC00474Q9P2X8 69 aa9.71□□□□□ -0.86
ACTB-202ENST00000414620 CSDC2Q9Y534 153 aaKnown RBP9.71□□□□□ -0.86
ACTB-202ENST00000414620 RPL39P62891 51 aaKnown RBP9.7□□□□□ -0.86
ACTB-202ENST00000414620 TMEM18Q96B42 140 aa9.7□□□□□ -0.86
ACTB-202ENST00000414620 CAMK2N2Q96S95 79 aa9.7□□□□□ -0.86
ACTB-202ENST00000414620 D6R8Y8 96 aa9.69□□□□□ -0.86
ACTB-202ENST00000414620 TNFRSF6BO95407 300 aa9.69□□□□□ -0.86
ACTB-202ENST00000414620 PTTG1IPP53801 180 aa9.69□□□□□ -0.86
ACTB-202ENST00000414620 LOC107984640A0A0U1RRK4 108 aa9.68□□□□□ -0.86
ACTB-202ENST00000414620 LINC00862A6NCI5 91 aa9.68□□□□□ -0.86
ACTB-202ENST00000414620 NPYP01303 97 aa9.68□□□□□ -0.86
ACTB-202ENST00000414620 C20orf78Q9BR46 151 aa9.68□□□□□ -0.86
ACTB-202ENST00000414620 SMIM2Q9BVW6 85 aa9.68□□□□□ -0.86
ACTB-202ENST00000414620 A0A1B0GW15 77 aa9.67□□□□□ -0.86
ACTB-202ENST00000414620 TCAPO15273 167 aa9.67□□□□□ -0.86
ACTB-202ENST00000414620 HBBP68871 147 aa9.67□□□□□ -0.86
ACTB-202ENST00000414620 SPAG11BQ08648 103 aa9.67□□□□□ -0.86
ACTB-202ENST00000414620 OPRPNQ99935 248 aaPredicted RBP9.67□□□□□ -0.86
ACTB-202ENST00000414620 TIMM21Q9BVV7 248 aa9.67□□□□□ -0.86
ACTB-202ENST00000414620 TRBV24-1A0A075B6N3 115 aa9.66□□□□□ -0.86
ACTB-202ENST00000414620 A0A0J9YXV3 536 aa9.66□□□□□ -0.86
ACTB-202ENST00000414620 APOMO95445 188 aa9.66□□□□□ -0.86
ACTB-202ENST00000414620 RPL18AQ02543 176 aaKnown RBP9.66□□□□□ -0.86
ACTB-202ENST00000414620 ODF1Q14990 250 aa9.66□□□□□ -0.86
ACTB-202ENST00000414620 A0A1B0GXF2 115 aa9.65□□□□□ -0.86
ACTB-202ENST00000414620 A0A1W2PNN7 141 aa9.65□□□□□ -0.86
ACTB-202ENST00000414620 F8W036 122 aa9.65□□□□□ -0.86
ACTB-202ENST00000414620 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.65□□□□□ -0.86
ACTB-202ENST00000414620 S100A8P05109 93 aa9.65□□□□□ -0.86
ACTB-202ENST00000414620 RPL32P62910 135 aaKnown RBP9.65□□□□□ -0.86
ACTB-202ENST00000414620 FAM104AQ969W3 186 aa9.65□□□□□ -0.86
ACTB-202ENST00000414620 Q6ZRP5 223 aa9.64□□□□□ -0.87
ACTB-202ENST00000414620 ORAOV1Q8WV07 137 aa9.64□□□□□ -0.87
ACTB-202ENST00000414620 C2orf48Q96LS8 159 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms