RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 E9PLD3 99 aa7.09□□□□□ -1.27
DDB1-202ENST00000414411 NHLRC4P0CG21 123 aaPredicted RBP7.09□□□□□ -1.27
DDB1-202ENST00000414411 MIFP14174 115 aa7.09□□□□□ -1.27
DDB1-202ENST00000414411 PMVKQ15126 192 aa7.09□□□□□ -1.27
DDB1-202ENST00000414411 RHOHQ15669 191 aa7.09□□□□□ -1.27
DDB1-202ENST00000414411 CEND1Q8N111 149 aa7.09□□□□□ -1.27
DDB1-202ENST00000414411 EDA2RQ9HAV5 297 aa7.09□□□□□ -1.27
DDB1-202ENST00000414411 MYMXA0A1B0GTQ4 84 aa7.09□□□□□ -1.27
DDB1-202ENST00000414411 H3BUT2 72 aa7.09□□□□□ -1.27
DDB1-202ENST00000414411 M0QXV9 152 aa7.09□□□□□ -1.27
DDB1-202ENST00000414411 TAL2Q16559 108 aa7.09□□□□□ -1.27
DDB1-202ENST00000414411 TMEM263Q8WUH6 116 aaKnown RBP7.09□□□□□ -1.27
DDB1-202ENST00000414411 PRADC1Q9BSG0 188 aa7.09□□□□□ -1.27
DDB1-202ENST00000414411 IGHV4-28A0A0C4DH34 117 aa7.08□□□□□ -1.28
DDB1-202ENST00000414411 C11orf86A6NJI1 115 aa7.08□□□□□ -1.28
DDB1-202ENST00000414411 VPREB1P12018 145 aa7.08□□□□□ -1.28
DDB1-202ENST00000414411 C6orf226Q5I0X4 101 aa7.08□□□□□ -1.28
DDB1-202ENST00000414411 PAPPA-AS1Q5QFB9 102 aa7.08□□□□□ -1.28
DDB1-202ENST00000414411 RAB37Q96AX2 223 aa7.08□□□□□ -1.28
DDB1-202ENST00000414411 CST9LQ9H4G1 147 aa7.08□□□□□ -1.28
DDB1-202ENST00000414411 SMIM13P0DJ93 91 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 ZNF415Q09FC8 603 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 PIK3CD-AS1Q5SR53 167 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 UFSP1Q6NVU6 142 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 IL17DQ8TAD2 202 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 C16orf74Q96GX8 76 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 NAA38Q9BRA0 125 aaKnown RBP7.07□□□□□ -1.28
DDB1-202ENST00000414411 NACAE9PAV3 2078 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 A0A1W2PPM0 123 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 I3L3M4 83 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 M0R2P5 195 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 P0DMU3 169 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 FAM231AP0DMU4 169 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 FAM231CP0DMU5 169 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 GTF2H5Q6ZYL4 71 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 PHLDA1Q8WV24 401 aaPredicted RBP7.07□□□□□ -1.28
DDB1-202ENST00000414411 PTH2Q96A98 100 aa7.07□□□□□ -1.28
DDB1-202ENST00000414411 TRBV7-3A0A075B6L6 115 aa7.06□□□□□ -1.28
DDB1-202ENST00000414411 A8MWV9 139 aa7.06□□□□□ -1.28
DDB1-202ENST00000414411 K7EP34 96 aa7.06□□□□□ -1.28
DDB1-202ENST00000414411 K7ERJ3 54 aa7.06□□□□□ -1.28
DDB1-202ENST00000414411 DEFB4AO15263 64 aa7.06□□□□□ -1.28
DDB1-202ENST00000414411 EMP1P54849 157 aa7.06□□□□□ -1.28
DDB1-202ENST00000414411 DAZ2Q13117 558 aaKnown RBP7.06□□□□□ -1.28
DDB1-202ENST00000414411 C20orf203Q8NBC4 194 aa7.06□□□□□ -1.28
DDB1-202ENST00000414411 HIST1H4GQ99525 98 aa7.06□□□□□ -1.28
DDB1-202ENST00000414411 C11orf68Q9H3H3 251 aaKnown RBP7.06□□□□□ -1.28
DDB1-202ENST00000414411 NHP2Q9NX24 153 aaKnown RBP7.06□□□□□ -1.28
DDB1-202ENST00000414411 HERVK_113P61574 105 aa7.05□□□□□ -1.28
DDB1-202ENST00000414411 IGHV3-73A0A0B4J1V6 119 aa7.05□□□□□ -1.28
DDB1-202ENST00000414411 GAGE12BA1L429 117 aa7.05□□□□□ -1.28
DDB1-202ENST00000414411 ZNF815PA8K554 130 aa7.05□□□□□ -1.28
DDB1-202ENST00000414411 ZNRF2Q8NHG8 242 aa7.05□□□□□ -1.28
DDB1-202ENST00000414411 NOP10Q9NPE3 64 aaKnown RBP7.05□□□□□ -1.28
DDB1-202ENST00000414411 A0A0J9YWU9 116 aa7.04□□□□□ -1.28
DDB1-202ENST00000414411 CFAP126Q5VTH2 177 aa7.04□□□□□ -1.28
DDB1-202ENST00000414411 NFE4Q86UQ8 179 aa7.04□□□□□ -1.28
DDB1-202ENST00000414411 FABP2P12104 132 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 LINC00612Q8N6U2 182 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 OPRPNQ99935 248 aaPredicted RBP7.03□□□□□ -1.28
DDB1-202ENST00000414411 SPCS1Q9Y6A9 102 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 DNAH7Q8WXX0 4024 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 IGLV4-3A0A075B6K6 122 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 LYRM9A8MSI8 78 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 RHODO00212 210 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 C12orf74Q32Q52 190 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 TMEM170BQ5T4T1 132 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 FAM222AQ5U5X8 452 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 SCGB1D4Q6XE38 83 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 OR5A1Q8NGJ0 315 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 PLEKHB2Q96CS7 222 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 CELA1Q9UNI1 258 aa7.03□□□□□ -1.28
DDB1-202ENST00000414411 A0A1B0GWB2 263 aa7.02□□□□□ -1.29
DDB1-202ENST00000414411 SPART-AS1P0CW21 52 aa7.02□□□□□ -1.29
DDB1-202ENST00000414411 TSPEAR-AS2P59090 65 aa7.02□□□□□ -1.29
DDB1-202ENST00000414411 Q6ZSN1 163 aa7.02□□□□□ -1.29
DDB1-202ENST00000414411 Q6ZTI0 123 aa7.02□□□□□ -1.29
DDB1-202ENST00000414411 MRPL16Q9NX20 251 aaKnown RBP7.02□□□□□ -1.29
DDB1-202ENST00000414411 PYGO1Q9Y3Y4 419 aa7.02□□□□□ -1.29
DDB1-202ENST00000414411 IGHV3-53P01767 116 aa7.01□□□□□ -1.29
DDB1-202ENST00000414411 RBX1P62877 108 aa7.01□□□□□ -1.29
DDB1-202ENST00000414411 Q9UF83 564 aa7.01□□□□□ -1.29
DDB1-202ENST00000414411 TRGV1A0A0A0MS02 117 aa7.01□□□□□ -1.29
DDB1-202ENST00000414411 IGLL5B9A064 214 aa7.01□□□□□ -1.29
DDB1-202ENST00000414411 OCIAD2Q56VL3 154 aa7.01□□□□□ -1.29
DDB1-202ENST00000414411 A0A0J9YY99 117 aa7□□□□□ -1.29
DDB1-202ENST00000414411 TEX48A0A1B0GUV7 120 aa7□□□□□ -1.29
DDB1-202ENST00000414411 TMEM223A0PJW6 202 aa7□□□□□ -1.29
DDB1-202ENST00000414411 FAM104AQ969W3 186 aa7□□□□□ -1.29
DDB1-202ENST00000414411 AMELXQ99217 191 aa7□□□□□ -1.29
DDB1-202ENST00000414411 CSMD3Q7Z407 3707 aa7□□□□□ -1.29
DDB1-202ENST00000414411 J3QQQ9 107 aa6.99□□□□□ -1.29
DDB1-202ENST00000414411 GAGE7O76087 117 aa6.99□□□□□ -1.29
DDB1-202ENST00000414411 GAGE12FP0CL80 117 aa6.99□□□□□ -1.29
DDB1-202ENST00000414411 GAGE12GP0CL81 117 aa6.99□□□□□ -1.29
DDB1-202ENST00000414411 GAGE12IP0CL82 117 aa6.99□□□□□ -1.29
DDB1-202ENST00000414411 DEFB130BP0DP73 79 aa6.99□□□□□ -1.29
DDB1-202ENST00000414411 DEFB130AP0DP74 79 aa6.99□□□□□ -1.29
DDB1-202ENST00000414411 ZNF22P17026 224 aaPredicted RBP6.99□□□□□ -1.29
DDB1-202ENST00000414411 CRYBA4P53673 196 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms