RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 C7orf77A4D0Y5 90 aa8.56□□□□□ -1.04
SSB-203ENST00000413002 LINC00862A6NCI5 91 aa8.56□□□□□ -1.04
SSB-203ENST00000413002 H7C423 109 aa8.56□□□□□ -1.04
SSB-203ENST00000413002 PPP1R17O96001 155 aa8.56□□□□□ -1.04
SSB-203ENST00000413002 ATP5L2Q7Z4Y8 100 aa8.56□□□□□ -1.04
SSB-203ENST00000413002 TMEM101Q96IK0 257 aa8.56□□□□□ -1.04
SSB-203ENST00000413002 BTF3L4Q96K17 158 aa8.56□□□□□ -1.04
SSB-203ENST00000413002 TRBV24-1A0A075B6N3 115 aa8.55□□□□□ -1.04
SSB-203ENST00000413002 C14orf177Q52M58 125 aa8.55□□□□□ -1.04
SSB-203ENST00000413002 RNASE13Q5GAN3 156 aaKnown RBP8.55□□□□□ -1.04
SSB-203ENST00000413002 TMEM136Q6ZRR5 245 aa8.55□□□□□ -1.04
SSB-203ENST00000413002 OR5A1Q8NGJ0 315 aa8.55□□□□□ -1.04
SSB-203ENST00000413002 CHCHD10Q8WYQ3 142 aaPredicted RBP8.55□□□□□ -1.04
SSB-203ENST00000413002 KIR2DL4Q99706 377 aa8.55□□□□□ -1.04
SSB-203ENST00000413002 TCAPO15273 167 aa8.54□□□□□ -1.04
SSB-203ENST00000413002 ZNF25P17030 456 aaPredicted RBP8.54□□□□□ -1.04
SSB-203ENST00000413002 C20orf78Q9BR46 151 aa8.54□□□□□ -1.04
SSB-203ENST00000413002 SMIM2Q9BVW6 85 aa8.54□□□□□ -1.04
SSB-203ENST00000413002 hDV102S1A0JD36 115 aa8.53□□□□□ -1.04
SSB-203ENST00000413002 XCL1P47992 114 aa8.53□□□□□ -1.04
SSB-203ENST00000413002 RPL39P62891 51 aaKnown RBP8.53□□□□□ -1.04
SSB-203ENST00000413002 DGAT2L7PQ6IED9 249 aa8.53□□□□□ -1.04
SSB-203ENST00000413002 MRPL52Q86TS9 123 aaKnown RBP8.53□□□□□ -1.04
SSB-203ENST00000413002 ORMDL3Q8N138 153 aa8.53□□□□□ -1.04
SSB-203ENST00000413002 PRELID3AQ96N28 172 aa8.53□□□□□ -1.04
SSB-203ENST00000413002 SEC11CQ9BY50 192 aa8.53□□□□□ -1.04
SSB-203ENST00000413002 CDC42SE2Q9NRR3 84 aa8.53□□□□□ -1.04
SSB-203ENST00000413002 DNAH8Q96JB1 4490 aa8.52□□□□□ -1.05
SSB-203ENST00000413002 LOC389332A0A1B0GUA5 103 aa8.52□□□□□ -1.05
SSB-203ENST00000413002 LINC00959A0A1B0GUT2 108 aa8.52□□□□□ -1.05
SSB-203ENST00000413002 CCL25O15444 150 aa8.52□□□□□ -1.05
SSB-203ENST00000413002 PPBPP02775 128 aa8.52□□□□□ -1.05
SSB-203ENST00000413002 ZNF664Q8N3J9 261 aa8.52□□□□□ -1.05
SSB-203ENST00000413002 UBE2D4Q9Y2X8 147 aa8.52□□□□□ -1.05
SSB-203ENST00000413002 FAT1Q14517 4588 aa8.52□□□□□ -1.05
SSB-203ENST00000413002 EPM2AB3EWF7 344 aa8.51□□□□□ -1.05
SSB-203ENST00000413002 RPL32P62910 135 aaKnown RBP8.51□□□□□ -1.05
SSB-203ENST00000413002 HIGD2BQ4VC39 106 aa8.51□□□□□ -1.05
SSB-203ENST00000413002 Q6ZSA8 131 aa8.51□□□□□ -1.05
SSB-203ENST00000413002 C15orf56Q8N910 161 aa8.51□□□□□ -1.05
SSB-203ENST00000413002 SLPIP03973 132 aa8.5□□□□□ -1.05
SSB-203ENST00000413002 FOXI1Q12951 378 aa8.5□□□□□ -1.05
SSB-203ENST00000413002 Q5VSD8 79 aa8.5□□□□□ -1.05
SSB-203ENST00000413002 Q6ZUT4 128 aa8.5□□□□□ -1.05
SSB-203ENST00000413002 CLRN3Q8NCR9 226 aa8.5□□□□□ -1.05
SSB-203ENST00000413002 OPRPNQ99935 248 aaPredicted RBP8.5□□□□□ -1.05
SSB-203ENST00000413002 CTDSP1Q9GZU7 261 aa8.5□□□□□ -1.05
SSB-203ENST00000413002 PHOX2AO14813 284 aa8.49□□□□□ -1.05
SSB-203ENST00000413002 KIAA1644Q3SXP7 199 aa8.49□□□□□ -1.05
SSB-203ENST00000413002 SCXQ7RTU7 201 aa8.49□□□□□ -1.05
SSB-203ENST00000413002 IMMP2LQ96T52 175 aa8.49□□□□□ -1.05
SSB-203ENST00000413002 TRAV13-1A0A0B4J241 112 aa8.48□□□□□ -1.05
SSB-203ENST00000413002 SS18Q15532 418 aa8.48□□□□□ -1.05
SSB-203ENST00000413002 C10orf91Q5T1B1 145 aa8.48□□□□□ -1.05
SSB-203ENST00000413002 C9orf163Q8N9P6 203 aa8.48□□□□□ -1.05
SSB-203ENST00000413002 FAM104AQ969W3 186 aa8.48□□□□□ -1.05
SSB-203ENST00000413002 LINC00526Q96FQ7 95 aa8.48□□□□□ -1.05
SSB-203ENST00000413002 RAB5AP20339 215 aa8.47□□□□□ -1.05
SSB-203ENST00000413002 TMEM18Q96B42 140 aa8.47□□□□□ -1.05
SSB-203ENST00000413002 MAP1LC3AQ9H492 121 aa8.47□□□□□ -1.05
SSB-203ENST00000413002 RPS10P5Q9NQ39 176 aa8.47□□□□□ -1.05
SSB-203ENST00000413002 AP5S1Q9NUS5 200 aa8.47□□□□□ -1.05
SSB-203ENST00000413002 CSDC2Q9Y534 153 aaKnown RBP8.47□□□□□ -1.05
SSB-203ENST00000413002 SRRM2Q9UQ35 2752 aaKnown RBP8.47□□□□□ -1.05
SSB-203ENST00000413002 PANO1I0J062 215 aa8.46□□□□□ -1.06
SSB-203ENST00000413002 CFAP161Q6P656 301 aa8.46□□□□□ -1.06
SSB-203ENST00000413002 CIRBP-AS1Q8TBR5 109 aa8.46□□□□□ -1.06
SSB-203ENST00000413002 CHAC1Q9BUX1 264 aa8.46□□□□□ -1.06
SSB-203ENST00000413002 TIMM21Q9BVV7 248 aa8.46□□□□□ -1.06
SSB-203ENST00000413002 CARHSP1Q9Y2V2 147 aaKnown RBP8.46□□□□□ -1.06
SSB-203ENST00000413002 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.46□□□□□ -1.06
SSB-203ENST00000413002 S100PP25815 95 aa8.45□□□□□ -1.06
SSB-203ENST00000413002 CNBPP62633 177 aaKnown RBP8.45□□□□□ -1.06
SSB-203ENST00000413002 SMAGPQ0VAQ4 97 aa8.45□□□□□ -1.06
SSB-203ENST00000413002 CD164L2Q6UWJ8 174 aa8.45□□□□□ -1.06
SSB-203ENST00000413002 SDIM1Q6ZPB5 146 aa8.45□□□□□ -1.06
SSB-203ENST00000413002 PRSS47A8MTI9 375 aa8.44□□□□□ -1.06
SSB-203ENST00000413002 C1orf196B1AJZ1 125 aa8.44□□□□□ -1.06
SSB-203ENST00000413002 FAM229AH3BQW9 127 aa8.44□□□□□ -1.06
SSB-203ENST00000413002 APOC3P02656 99 aa8.44□□□□□ -1.06
SSB-203ENST00000413002 Q8N8P6 123 aa8.44□□□□□ -1.06
SSB-203ENST00000413002 LAMTOR2Q9Y2Q5 125 aa8.44□□□□□ -1.06
SSB-203ENST00000413002 GVQW2A0A096LPI5 108 aaPredicted RBP8.43□□□□□ -1.06
SSB-203ENST00000413002 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.43□□□□□ -1.06
SSB-203ENST00000413002 CHTF8P0CG12 524 aa8.43□□□□□ -1.06
SSB-203ENST00000413002 IFI27P40305 119 aaPredicted RBP8.43□□□□□ -1.06
SSB-203ENST00000413002 RHEBQ15382 184 aa8.43□□□□□ -1.06
SSB-203ENST00000413002 C5orf38Q86SI9 138 aa8.43□□□□□ -1.06
SSB-203ENST00000413002 SPANXA1Q9NS26 97 aa8.43□□□□□ -1.06
SSB-203ENST00000413002 IGHV3-64A0A075B6Q5 118 aa8.42□□□□□ -1.06
SSB-203ENST00000413002 TRAV9-1A0A075B6T8 112 aa8.42□□□□□ -1.06
SSB-203ENST00000413002 IGHV1-58A0A0C4DH39 117 aa8.42□□□□□ -1.06
SSB-203ENST00000413002 INAFM2P0DMQ5 153 aa8.42□□□□□ -1.06
SSB-203ENST00000413002 ZC2HC1BQ5TFG8 222 aa8.42□□□□□ -1.06
SSB-203ENST00000413002 VPS13BQ7Z7G8 4022 aa8.41□□□□□ -1.06
SSB-203ENST00000413002 TGIF2-C20orf24A0A0A6YYL0 155 aa8.41□□□□□ -1.06
SSB-203ENST00000413002 IFITM10A6NMD0 228 aa8.41□□□□□ -1.06
SSB-203ENST00000413002 COX7A2LO14548 114 aa8.41□□□□□ -1.06
SSB-203ENST00000413002 MALP21145 153 aa8.41□□□□□ -1.06
SSB-203ENST00000413002 PRSS3P2Q8NHM4 247 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms