RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 A0A0J9YWU9 116 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 FABP5P3A8MUU1 101 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 H7C1H1 209 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 SNAI2O43623 268 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 APOMO95445 188 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 NPYP01303 97 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 DEFB131AP59861 70 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 ETDBQ3ZM63 59 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 MORN3Q6PF18 240 aaPredicted RBP3.82□□□□□ -1.8
LINC00342-201ENST00000412393 TEN1Q86WV5 123 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 PPDPFLQ8WWR9 84 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 RAB37Q96AX2 223 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 AAMDCQ9H7C9 122 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 ALMS1Q8TCU4 4167 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 LYSTQ99698 3801 aa3.82□□□□□ -1.8
LINC00342-201ENST00000412393 MYMXA0A1B0GTQ4 84 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 F8VRH5 84 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 K7EQG2 157 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 SH2D1AO60880 128 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 GAS8-AS1O95177 125 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 PRSS1P07477 247 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 ZNF688P0C7X2 276 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 RPL7P18124 248 aaKnown RBP3.81□□□□□ -1.8
LINC00342-201ENST00000412393 LEPP41159 167 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 NMUP48645 174 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 LAGE3Q14657 143 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 MRPL23Q16540 153 aaKnown RBP3.81□□□□□ -1.8
LINC00342-201ENST00000412393 PAPPA-AS1Q5QFB9 102 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 ZC2HC1BQ5TFG8 222 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 STHQ8IWL8 128 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 EXOC3-AS1Q8N2X6 119 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 POM121L12Q8N7R1 296 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 MRPL53Q96EL3 112 aaKnown RBP3.81□□□□□ -1.8
LINC00342-201ENST00000412393 C20orf78Q9BR46 151 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 NHP2Q9NX24 153 aaKnown RBP3.81□□□□□ -1.8
LINC00342-201ENST00000412393 LENEPQ9Y5L5 61 aa3.81□□□□□ -1.8
LINC00342-201ENST00000412393 LOC389332A0A1B0GUA5 103 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 A0A1B0GX51 115 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 NUPR2A6NF83 97 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 KNCNA6PVL3 124 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 RHODO00212 210 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 PPP1R17O96001 155 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 IL4P05112 153 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 TMEM78Q5T7P6 136 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 CEMP1Q6PRD7 247 aaPredicted RBP3.8□□□□□ -1.8
LINC00342-201ENST00000412393 SH2D6Q7Z4S9 175 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 TRPT1Q86TN4 253 aaKnown RBP3.8□□□□□ -1.8
LINC00342-201ENST00000412393 MAPKAPK5-AS1Q8N8E1 139 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 NEXN-AS1Q8NBZ9 246 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 OR13C6PQ8NH95 151 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 DCANP1Q8TF63 244 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 RNF125Q96EQ8 232 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 DNAJC30Q96LL9 226 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 SGK494Q96LW2 274 aa3.8□□□□□ -1.8
LINC00342-201ENST00000412393 KLK5Q9Y337 293 aaPredicted RBP3.8□□□□□ -1.8
LINC00342-201ENST00000412393 A4D1N5 150 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 J3KT08 172 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 M0R381 172 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 BUB3O43684 328 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 ID1P41134 155 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 ERCC8Q13216 396 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 ORMDL2Q53FV1 153 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 NFE4Q86UQ8 179 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 OR10J6PQ8NGY7 276 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 TOMM6Q96B49 74 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 CARD19Q96LW7 228 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 C17orf77Q96MU5 243 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 HIST1H4GQ99525 98 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 NAA38Q9BRA0 125 aaKnown RBP3.79□□□□□ -1.8
LINC00342-201ENST00000412393 SLC50A1Q9BRV3 221 aa3.79□□□□□ -1.8
LINC00342-201ENST00000412393 C11orf68Q9H3H3 251 aaKnown RBP3.79□□□□□ -1.8
LINC00342-201ENST00000412393 MRPL35Q9NZE8 188 aaKnown RBP3.79□□□□□ -1.8
LINC00342-201ENST00000412393 CSDC2Q9Y534 153 aaKnown RBP3.79□□□□□ -1.8
LINC00342-201ENST00000412393 HYDINQ4G0P3 5121 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 DEFB4AO15263 64 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 SNCGO76070 127 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 LY6G6CO95867 125 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 GIG44P09565 113 aaPredicted RBP3.78□□□□□ -1.8
LINC00342-201ENST00000412393 P0DMU3 169 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 FAM231AP0DMU4 169 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 FAM231CP0DMU5 169 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 IFITM1P13164 125 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 RPL13AP40429 203 aaKnown RBP3.78□□□□□ -1.8
LINC00342-201ENST00000412393 ZNF80P51504 273 aaPredicted RBP3.78□□□□□ -1.8
LINC00342-201ENST00000412393 NDUFV3P56181 108 aaKnown RBP3.78□□□□□ -1.8
LINC00342-201ENST00000412393 LYZP61626 148 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 SNRPD3P62318 126 aaKnown RBP3.78□□□□□ -1.8
LINC00342-201ENST00000412393 GAGE2BQ13066 116 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 GAGE2EQ4V326 116 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 SLC25A29Q8N8R3 303 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 C11orf45Q8TAV5 145 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 GAGE2DQ9UEU5 116 aa3.78□□□□□ -1.8
LINC00342-201ENST00000412393 IGHV4-28A0A0C4DH34 117 aa3.77□□□□□ -1.81
LINC00342-201ENST00000412393 FAM240AA0A1B0GVK7 77 aa3.77□□□□□ -1.81
LINC00342-201ENST00000412393 SMIM9A6NGZ8 99 aa3.77□□□□□ -1.81
LINC00342-201ENST00000412393 K7ERJ3 54 aa3.77□□□□□ -1.81
LINC00342-201ENST00000412393 M0R3E3 92 aa3.77□□□□□ -1.81
LINC00342-201ENST00000412393 IGKV3-20P01619 116 aa3.77□□□□□ -1.81
LINC00342-201ENST00000412393 MT-ATP8P03928 68 aa3.77□□□□□ -1.81
LINC00342-201ENST00000412393 ATP5G1P05496 136 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms