RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 LINC00959A0A1B0GUT2 108 aa14.15□□□□□ -0.14
MSH6-202ENST00000411819 MAJINQ3KP22 176 aa14.15□□□□□ -0.14
MSH6-202ENST00000411819 PRSS3P2Q8NHM4 247 aa14.15□□□□□ -0.14
MSH6-202ENST00000411819 V9GYV3 84 aa14.15□□□□□ -0.14
MSH6-202ENST00000411819 C7orf77A4D0Y5 90 aa14.14□□□□□ -0.15
MSH6-202ENST00000411819 SMKR1H3BMG3 65 aa14.14□□□□□ -0.15
MSH6-202ENST00000411819 POLR2KP53803 58 aaKnown RBP14.14□□□□□ -0.15
MSH6-202ENST00000411819 RIGQ13278 110 aa14.14□□□□□ -0.15
MSH6-202ENST00000411819 PLAC8Q9NZF1 115 aa14.14□□□□□ -0.15
MSH6-202ENST00000411819 HMCN2Q8NDA2 5059 aa14.14□□□□□ -0.15
MSH6-202ENST00000411819 TRBV27A0A0K0K1C4 114 aa14.13□□□□□ -0.15
MSH6-202ENST00000411819 FCER1GP30273 86 aa14.13□□□□□ -0.15
MSH6-202ENST00000411819 SS18Q15532 418 aa14.13□□□□□ -0.15
MSH6-202ENST00000411819 NUP35Q8NFH5 326 aa14.13□□□□□ -0.15
MSH6-202ENST00000411819 C7orf33Q8WU49 177 aa14.13□□□□□ -0.15
MSH6-202ENST00000411819 MRPL52Q86TS9 123 aaKnown RBP14.12□□□□□ -0.15
MSH6-202ENST00000411819 ISOC2Q96AB3 205 aa14.12□□□□□ -0.15
MSH6-202ENST00000411819 IGHV1-58A0A0C4DH39 117 aa14.11□□□□□ -0.15
MSH6-202ENST00000411819 PHOX2AO14813 284 aa14.11□□□□□ -0.15
MSH6-202ENST00000411819 ADIRFQ15847 76 aa14.11□□□□□ -0.15
MSH6-202ENST00000411819 TMEM241Q24JQ0 296 aa14.11□□□□□ -0.15
MSH6-202ENST00000411819 CDC42SE2Q9NRR3 84 aa14.11□□□□□ -0.15
MSH6-202ENST00000411819 ZNF664Q8N3J9 261 aa14.1□□□□□ -0.15
MSH6-202ENST00000411819 LINC00526Q96FQ7 95 aa14.1□□□□□ -0.15
MSH6-202ENST00000411819 NAT8BQ9UHF3 227 aa14.1□□□□□ -0.15
MSH6-202ENST00000411819 A0A096LNI7 61 aa14.09□□□□□ -0.15
MSH6-202ENST00000411819 VCYO14598 125 aa14.09□□□□□ -0.15
MSH6-202ENST00000411819 RPL23P62829 140 aaKnown RBP14.09□□□□□ -0.15
MSH6-202ENST00000411819 FAM74A3Q4VXF1 159 aa14.09□□□□□ -0.15
MSH6-202ENST00000411819 Q6ZRU5 148 aa14.09□□□□□ -0.15
MSH6-202ENST00000411819 STPG4Q8N801 248 aa14.09□□□□□ -0.15
MSH6-202ENST00000411819 PPP1R17O96001 155 aa14.08□□□□□ -0.16
MSH6-202ENST00000411819 SUMO2P61956 95 aaKnown RBP14.08□□□□□ -0.16
MSH6-202ENST00000411819 CARD19Q96LW7 228 aa14.08□□□□□ -0.16
MSH6-202ENST00000411819 KIR2DL4Q99706 377 aa14.08□□□□□ -0.16
MSH6-202ENST00000411819 PLA2G2DQ9UNK4 145 aa14.08□□□□□ -0.16
MSH6-202ENST00000411819 CD164L2Q6UWJ8 174 aa14.07□□□□□ -0.16
MSH6-202ENST00000411819 NRACQ8N912 160 aa14.07□□□□□ -0.16
MSH6-202ENST00000411819 PKIGQ9Y2B9 76 aa14.07□□□□□ -0.16
MSH6-202ENST00000411819 A0A1B0GVG6 124 aa14.06□□□□□ -0.16
MSH6-202ENST00000411819 ZNF561-AS1K7EIQ3 104 aa14.06□□□□□ -0.16
MSH6-202ENST00000411819 NAT8Q9UHE5 227 aa14.06□□□□□ -0.16
MSH6-202ENST00000411819 CAMPP49913 170 aa14.05□□□□□ -0.16
MSH6-202ENST00000411819 SMAGPQ0VAQ4 97 aa14.05□□□□□ -0.16
MSH6-202ENST00000411819 RNASE13Q5GAN3 156 aaKnown RBP14.05□□□□□ -0.16
MSH6-202ENST00000411819 PPP1R2P9O14990 202 aa14.04□□□□□ -0.16
MSH6-202ENST00000411819 MALP21145 153 aa14.04□□□□□ -0.16
MSH6-202ENST00000411819 MRPL51Q4U2R6 128 aaKnown RBP14.04□□□□□ -0.16
MSH6-202ENST00000411819 UBE2D4Q9Y2X8 147 aa14.04□□□□□ -0.16
MSH6-202ENST00000411819 C9JQL5 133 aa14.03□□□□□ -0.16
MSH6-202ENST00000411819 SYCNQ0VAF6 134 aa14.03□□□□□ -0.16
MSH6-202ENST00000411819 FAM104BQ5XKR9 115 aa14.03□□□□□ -0.16
MSH6-202ENST00000411819 LINC00474Q9P2X8 69 aa14.03□□□□□ -0.16
MSH6-202ENST00000411819 SMIM27A0A1W2PRY6 76 aa14.02□□□□□ -0.17
MSH6-202ENST00000411819 C1orf196B1AJZ1 125 aa14.02□□□□□ -0.17
MSH6-202ENST00000411819 TRAV13-1A0A0B4J241 112 aa14.01□□□□□ -0.17
MSH6-202ENST00000411819 COX7A2LO14548 114 aa14.01□□□□□ -0.17
MSH6-202ENST00000411819 MT1HL1P0DM35 61 aa14.01□□□□□ -0.17
MSH6-202ENST00000411819 PRR3P79522 188 aaKnown RBP14.01□□□□□ -0.17
MSH6-202ENST00000411819 SRSF3P84103 164 aaKnown RBP14.01□□□□□ -0.17
MSH6-202ENST00000411819 PEA15Q15121 130 aa14.01□□□□□ -0.17
MSH6-202ENST00000411819 Q6ZUT4 128 aa14.01□□□□□ -0.17
MSH6-202ENST00000411819 TMEM18Q96B42 140 aa14.01□□□□□ -0.17
MSH6-202ENST00000411819 CSDC2Q9Y534 153 aaKnown RBP14.01□□□□□ -0.17
MSH6-202ENST00000411819 CKS2P33552 79 aa14□□□□□ -0.17
MSH6-202ENST00000411819 IGLV4-69A0A075B6H9 119 aa13.99□□□□□ -0.17
MSH6-202ENST00000411819 A0A1B0GW15 77 aa13.99□□□□□ -0.17
MSH6-202ENST00000411819 LINC00862A6NCI5 91 aa13.99□□□□□ -0.17
MSH6-202ENST00000411819 MRPL54Q6P161 138 aaKnown RBP13.98□□□□□ -0.17
MSH6-202ENST00000411819 C20orf78Q9BR46 151 aa13.98□□□□□ -0.17
MSH6-202ENST00000411819 HBBP68871 147 aa13.96□□□□□ -0.17
MSH6-202ENST00000411819 GAGE2BQ13066 116 aa13.96□□□□□ -0.17
MSH6-202ENST00000411819 C5orf38Q86SI9 138 aa13.96□□□□□ -0.17
MSH6-202ENST00000411819 CAMK2N2Q96S95 79 aa13.96□□□□□ -0.17
MSH6-202ENST00000411819 LOC107984640A0A0U1RRK4 108 aa13.95□□□□□ -0.18
MSH6-202ENST00000411819 D6R8Y8 96 aa13.95□□□□□ -0.18
MSH6-202ENST00000411819 TNFRSF6BO95407 300 aa13.95□□□□□ -0.18
MSH6-202ENST00000411819 S100A8P05109 93 aa13.95□□□□□ -0.18
MSH6-202ENST00000411819 TIMM21Q9BVV7 248 aa13.95□□□□□ -0.18
MSH6-202ENST00000411819 SMIM2Q9BVW6 85 aa13.95□□□□□ -0.18
MSH6-202ENST00000411819 TRBV24-1A0A075B6N3 115 aa13.94□□□□□ -0.18
MSH6-202ENST00000411819 F8W036 122 aa13.94□□□□□ -0.18
MSH6-202ENST00000411819 TCAPO15273 167 aa13.94□□□□□ -0.18
MSH6-202ENST00000411819 PTTG1IPP53801 180 aa13.94□□□□□ -0.18
MSH6-202ENST00000411819 RPL39P62891 51 aaKnown RBP13.94□□□□□ -0.18
MSH6-202ENST00000411819 SMDT1Q9H4I9 107 aa13.94□□□□□ -0.18
MSH6-202ENST00000411819 APOMO95445 188 aa13.93□□□□□ -0.18
MSH6-202ENST00000411819 RPL32P62910 135 aaKnown RBP13.93□□□□□ -0.18
MSH6-202ENST00000411819 UBR4Q5T4S7 5183 aa13.92□□□□□ -0.18
MSH6-202ENST00000411819 SPAG11BQ08648 103 aa13.92□□□□□ -0.18
MSH6-202ENST00000411819 NPYP01303 97 aa13.91□□□□□ -0.18
MSH6-202ENST00000411819 A0A1B0GXF2 115 aa13.9□□□□□ -0.18
MSH6-202ENST00000411819 RPL18AQ02543 176 aaKnown RBP13.9□□□□□ -0.18
MSH6-202ENST00000411819 C2orf48Q96LS8 159 aa13.9□□□□□ -0.18
MSH6-202ENST00000411819 SPANXA1Q9NS26 97 aa13.9□□□□□ -0.18
MSH6-202ENST00000411819 Q6ZRP5 223 aa13.88□□□□□ -0.19
MSH6-202ENST00000411819 OPRPNQ99935 248 aaPredicted RBP13.88□□□□□ -0.19
MSH6-202ENST00000411819 IFITM10A6NMD0 228 aa13.87□□□□□ -0.19
MSH6-202ENST00000411819 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.87□□□□□ -0.19
MSH6-202ENST00000411819 PPBPP02775 128 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms