RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 MRPL52Q86TS9 123 aaKnown RBP10.69□□□□□ -0.7
NOD1-202ENST00000411552 OR5A1Q8NGJ0 315 aa10.69□□□□□ -0.7
NOD1-202ENST00000411552 TMEM101Q96IK0 257 aa10.69□□□□□ -0.7
NOD1-202ENST00000411552 PRELID3AQ96N28 172 aa10.69□□□□□ -0.7
NOD1-202ENST00000411552 CARHSP1Q9Y2V2 147 aaKnown RBP10.69□□□□□ -0.7
NOD1-202ENST00000411552 DNAH8Q96JB1 4490 aa10.66□□□□□ -0.7
NOD1-202ENST00000411552 TRAV9-1A0A075B6T8 112 aa10.66□□□□□ -0.7
NOD1-202ENST00000411552 TCAPO15273 167 aa10.66□□□□□ -0.7
NOD1-202ENST00000411552 PRSS1P07477 247 aa10.66□□□□□ -0.7
NOD1-202ENST00000411552 XGP55808 180 aa10.66□□□□□ -0.7
NOD1-202ENST00000411552 CDC42SE2Q9NRR3 84 aa10.66□□□□□ -0.7
NOD1-202ENST00000411552 GAGE12HA6NDE8 117 aa10.65□□□□□ -0.7
NOD1-202ENST00000411552 RHEBQ15382 184 aa10.65□□□□□ -0.7
NOD1-202ENST00000411552 LINC01620Q4KN68 170 aa10.65□□□□□ -0.7
NOD1-202ENST00000411552 ZNF664Q8N3J9 261 aa10.65□□□□□ -0.7
NOD1-202ENST00000411552 CLRN3Q8NCR9 226 aa10.65□□□□□ -0.7
NOD1-202ENST00000411552 CHCHD10Q8WYQ3 142 aaPredicted RBP10.65□□□□□ -0.7
NOD1-202ENST00000411552 LAMTOR2Q9Y2Q5 125 aa10.65□□□□□ -0.7
NOD1-202ENST00000411552 UBE2D4Q9Y2X8 147 aa10.65□□□□□ -0.7
NOD1-202ENST00000411552 S100PP25815 95 aa10.64□□□□□ -0.71
NOD1-202ENST00000411552 SMAGPQ0VAQ4 97 aa10.64□□□□□ -0.71
NOD1-202ENST00000411552 DGAT2L7PQ6IED9 249 aa10.64□□□□□ -0.71
NOD1-202ENST00000411552 RPS10P5Q9NQ39 176 aa10.64□□□□□ -0.71
NOD1-202ENST00000411552 CSDC2Q9Y534 153 aaKnown RBP10.64□□□□□ -0.71
NOD1-202ENST00000411552 LINC00959A0A1B0GUT2 108 aa10.63□□□□□ -0.71
NOD1-202ENST00000411552 RPL39P62891 51 aaKnown RBP10.63□□□□□ -0.71
NOD1-202ENST00000411552 TMEM18Q96B42 140 aa10.63□□□□□ -0.71
NOD1-202ENST00000411552 FAM30AQ9NZY2 134 aa10.63□□□□□ -0.71
NOD1-202ENST00000411552 LOC389332A0A1B0GUA5 103 aa10.62□□□□□ -0.71
NOD1-202ENST00000411552 PRSS47A8MTI9 375 aa10.62□□□□□ -0.71
NOD1-202ENST00000411552 TIMM21Q9BVV7 248 aa10.62□□□□□ -0.71
NOD1-202ENST00000411552 MAP1LC3AQ9H492 121 aa10.62□□□□□ -0.71
NOD1-202ENST00000411552 APOC3P02656 99 aa10.61□□□□□ -0.71
NOD1-202ENST00000411552 RAB5AP20339 215 aa10.61□□□□□ -0.71
NOD1-202ENST00000411552 XCL1P47992 114 aa10.61□□□□□ -0.71
NOD1-202ENST00000411552 HAMPP81172 84 aa10.61□□□□□ -0.71
NOD1-202ENST00000411552 RNASE13Q5GAN3 156 aaKnown RBP10.61□□□□□ -0.71
NOD1-202ENST00000411552 KRTAP4-5Q9BYR2 181 aa10.61□□□□□ -0.71
NOD1-202ENST00000411552 hDV102S1A0JD36 115 aa10.6□□□□□ -0.71
NOD1-202ENST00000411552 CCL25O15444 150 aa10.6□□□□□ -0.71
NOD1-202ENST00000411552 FOXI1Q12951 378 aa10.6□□□□□ -0.71
NOD1-202ENST00000411552 Q6ZSA8 131 aa10.6□□□□□ -0.71
NOD1-202ENST00000411552 Q6ZUT4 128 aa10.6□□□□□ -0.71
NOD1-202ENST00000411552 Q8N1X5 172 aa10.6□□□□□ -0.71
NOD1-202ENST00000411552 C15orf56Q8N910 161 aa10.6□□□□□ -0.71
NOD1-202ENST00000411552 SS18Q15532 418 aa10.59□□□□□ -0.71
NOD1-202ENST00000411552 KIAA1644Q3SXP7 199 aa10.59□□□□□ -0.71
NOD1-202ENST00000411552 Q8N8P6 123 aa10.59□□□□□ -0.71
NOD1-202ENST00000411552 FAM104AQ969W3 186 aa10.59□□□□□ -0.71
NOD1-202ENST00000411552 GNB1LQ9BYB4 327 aa10.59□□□□□ -0.71
NOD1-202ENST00000411552 SPANXA1Q9NS26 97 aa10.59□□□□□ -0.71
NOD1-202ENST00000411552 NDUFA5Q16718 116 aa10.58□□□□□ -0.72
NOD1-202ENST00000411552 SVBPQ8N300 66 aa10.58□□□□□ -0.72
NOD1-202ENST00000411552 ABCA13Q86UQ4 5058 aa10.57□□□□□ -0.72
NOD1-202ENST00000411552 SNAPINO95295 136 aa10.57□□□□□ -0.72
NOD1-202ENST00000411552 CNBPP62633 177 aaKnown RBP10.57□□□□□ -0.72
NOD1-202ENST00000411552 CFAP161Q6P656 301 aa10.57□□□□□ -0.72
NOD1-202ENST00000411552 CD164L2Q6UWJ8 174 aa10.57□□□□□ -0.72
NOD1-202ENST00000411552 OPRPNQ99935 248 aaPredicted RBP10.57□□□□□ -0.72
NOD1-202ENST00000411552 TRAV13-1A0A0B4J241 112 aa10.56□□□□□ -0.72
NOD1-202ENST00000411552 SLPIP03973 132 aa10.56□□□□□ -0.72
NOD1-202ENST00000411552 C9orf163Q8N9P6 203 aa10.56□□□□□ -0.72
NOD1-202ENST00000411552 AP5S1Q9NUS5 200 aa10.56□□□□□ -0.72
NOD1-202ENST00000411552 FAT1Q14517 4588 aa10.56□□□□□ -0.72
NOD1-202ENST00000411552 C1orf196B1AJZ1 125 aa10.55□□□□□ -0.72
NOD1-202ENST00000411552 IFI27P40305 119 aaPredicted RBP10.55□□□□□ -0.72
NOD1-202ENST00000411552 MRPS36P82909 103 aaKnown RBP10.55□□□□□ -0.72
NOD1-202ENST00000411552 COX19Q49B96 90 aa10.55□□□□□ -0.72
NOD1-202ENST00000411552 HIGD2BQ4VC39 106 aa10.55□□□□□ -0.72
NOD1-202ENST00000411552 NXT2Q9NPJ8 142 aaKnown RBP10.55□□□□□ -0.72
NOD1-202ENST00000411552 TGIF2-C20orf24A0A0A6YYL0 155 aa10.54□□□□□ -0.72
NOD1-202ENST00000411552 SMR3BP02814 79 aaPredicted RBP10.54□□□□□ -0.72
NOD1-202ENST00000411552 MT-ND6P03923 174 aa10.54□□□□□ -0.72
NOD1-202ENST00000411552 GVQW2A0A096LPI5 108 aaPredicted RBP10.53□□□□□ -0.72
NOD1-202ENST00000411552 K7EMI3 77 aa10.53□□□□□ -0.72
NOD1-202ENST00000411552 ORMDL2Q53FV1 153 aa10.53□□□□□ -0.72
NOD1-202ENST00000411552 ALKBH7Q9BT30 221 aaPredicted RBP10.53□□□□□ -0.72
NOD1-202ENST00000411552 MRPL18Q9H0U6 180 aaKnown RBP10.53□□□□□ -0.72
NOD1-202ENST00000411552 PYGO1Q9Y3Y4 419 aa10.53□□□□□ -0.72
NOD1-202ENST00000411552 VPS13BQ7Z7G8 4022 aa10.53□□□□□ -0.72
NOD1-202ENST00000411552 IGHV1-58A0A0C4DH39 117 aa10.52□□□□□ -0.73
NOD1-202ENST00000411552 FABP9Q0Z7S8 132 aa10.52□□□□□ -0.73
NOD1-202ENST00000411552 C2orf66Q6UXQ4 117 aa10.52□□□□□ -0.73
NOD1-202ENST00000411552 CYSLTR1Q9Y271 337 aa10.52□□□□□ -0.73
NOD1-202ENST00000411552 IGLV4-3A0A075B6K6 122 aa10.51□□□□□ -0.73
NOD1-202ENST00000411552 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.51□□□□□ -0.73
NOD1-202ENST00000411552 IFITM10A6NMD0 228 aa10.51□□□□□ -0.73
NOD1-202ENST00000411552 SDIM1Q6ZPB5 146 aa10.51□□□□□ -0.73
NOD1-202ENST00000411552 SCXQ7RTU7 201 aa10.51□□□□□ -0.73
NOD1-202ENST00000411552 CHAC1Q9BUX1 264 aa10.51□□□□□ -0.73
NOD1-202ENST00000411552 EPM2AB3EWF7 344 aa10.5□□□□□ -0.73
NOD1-202ENST00000411552 COX7A2LO14548 114 aa10.5□□□□□ -0.73
NOD1-202ENST00000411552 SLC7A5P1Q8MH63 180 aa10.5□□□□□ -0.73
NOD1-202ENST00000411552 TMEM141Q96I45 108 aa10.5□□□□□ -0.73
NOD1-202ENST00000411552 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
NOD1-202ENST00000411552 MALP21145 153 aa10.49□□□□□ -0.73
NOD1-202ENST00000411552 Q5VSD8 79 aa10.49□□□□□ -0.73
NOD1-202ENST00000411552 C5orf38Q86SI9 138 aa10.49□□□□□ -0.73
NOD1-202ENST00000411552 PRSS3P2Q8NHM4 247 aa10.49□□□□□ -0.73
NOD1-202ENST00000411552 LINC00526Q96FQ7 95 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms