RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 TWIST1Q15672 202 aa5.78□□□□□ -1.48
NIF3L1-203ENST00000409129 LYPD6BQ8NI32 183 aa5.78□□□□□ -1.48
NIF3L1-203ENST00000409129 C7orf33Q8WU49 177 aa5.78□□□□□ -1.48
NIF3L1-203ENST00000409129 IGKV3OR2-268A0A0C4DH90 116 aa5.77□□□□□ -1.49
NIF3L1-203ENST00000409129 NDUFS6O75380 124 aaKnown RBP5.77□□□□□ -1.49
NIF3L1-203ENST00000409129 TAGLN2P37802 199 aaKnown RBP5.77□□□□□ -1.49
NIF3L1-203ENST00000409129 CTRLP40313 264 aa5.77□□□□□ -1.49
NIF3L1-203ENST00000409129 RNF151Q2KHN1 245 aa5.77□□□□□ -1.49
NIF3L1-203ENST00000409129 HIGD2BQ4VC39 106 aa5.77□□□□□ -1.49
NIF3L1-203ENST00000409129 GATD1Q8NB37 220 aa5.77□□□□□ -1.49
NIF3L1-203ENST00000409129 PRSS3P2Q8NHM4 247 aa5.77□□□□□ -1.49
NIF3L1-203ENST00000409129 CNFNQ9BYD5 112 aa5.77□□□□□ -1.49
NIF3L1-203ENST00000409129 TRAV26-2A0A0B4J265 109 aa5.76□□□□□ -1.49
NIF3L1-203ENST00000409129 K7EN84 100 aa5.76□□□□□ -1.49
NIF3L1-203ENST00000409129 NCR2O95944 276 aa5.76□□□□□ -1.49
NIF3L1-203ENST00000409129 MAJINQ3KP22 176 aa5.76□□□□□ -1.49
NIF3L1-203ENST00000409129 AMMECR1LQ6DCA0 310 aa5.76□□□□□ -1.49
NIF3L1-203ENST00000409129 GTSF1Q8WW33 167 aa5.76□□□□□ -1.49
NIF3L1-203ENST00000409129 CHCHD10Q8WYQ3 142 aaPredicted RBP5.76□□□□□ -1.49
NIF3L1-203ENST00000409129 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.75□□□□□ -1.49
NIF3L1-203ENST00000409129 GVQW2A0A096LPI5 108 aaPredicted RBP5.75□□□□□ -1.49
NIF3L1-203ENST00000409129 IGKV2-24A0A0C4DH68 120 aa5.75□□□□□ -1.49
NIF3L1-203ENST00000409129 IGKV2-29A2NJV5 120 aaPredicted RBP5.75□□□□□ -1.49
NIF3L1-203ENST00000409129 TMEM250H0YL14 139 aa5.75□□□□□ -1.49
NIF3L1-203ENST00000409129 H7C423 109 aa5.75□□□□□ -1.49
NIF3L1-203ENST00000409129 RNASEKQ6P5S7 137 aaKnown RBP5.75□□□□□ -1.49
NIF3L1-203ENST00000409129 LINC00469Q8N7U9 141 aa5.75□□□□□ -1.49
NIF3L1-203ENST00000409129 STPG4Q8N801 248 aa5.75□□□□□ -1.49
NIF3L1-203ENST00000409129 OCC1Q8TAD7 63 aa5.75□□□□□ -1.49
NIF3L1-203ENST00000409129 LINC01600Q96MT4 127 aa5.75□□□□□ -1.49
NIF3L1-203ENST00000409129 RNASE7Q9H1E1 156 aaKnown RBP5.75□□□□□ -1.49
NIF3L1-203ENST00000409129 RPP21Q9H633 154 aaKnown RBP5.75□□□□□ -1.49
NIF3L1-203ENST00000409129 APCSP02743 223 aa5.74□□□□□ -1.49
NIF3L1-203ENST00000409129 SRP19P09132 144 aaKnown RBP5.74□□□□□ -1.49
NIF3L1-203ENST00000409129 FGF6P10767 208 aa5.74□□□□□ -1.49
NIF3L1-203ENST00000409129 FOXA3P55318 350 aaPredicted RBP5.74□□□□□ -1.49
NIF3L1-203ENST00000409129 PRR3P79522 188 aaKnown RBP5.74□□□□□ -1.49
NIF3L1-203ENST00000409129 FOXI1Q12951 378 aa5.74□□□□□ -1.49
NIF3L1-203ENST00000409129 SMIM15Q7Z3B0 74 aa5.74□□□□□ -1.49
NIF3L1-203ENST00000409129 RPL39LQ96EH5 51 aaKnown RBP5.74□□□□□ -1.49
NIF3L1-203ENST00000409129 SMIM7Q9BQ49 75 aa5.74□□□□□ -1.49
NIF3L1-203ENST00000409129 A0A096LNI7 61 aa5.73□□□□□ -1.49
NIF3L1-203ENST00000409129 SDHAF1A6NFY7 115 aa5.73□□□□□ -1.49
NIF3L1-203ENST00000409129 C9JQL5 133 aa5.73□□□□□ -1.49
NIF3L1-203ENST00000409129 ZNF25P17030 456 aaPredicted RBP5.73□□□□□ -1.49
NIF3L1-203ENST00000409129 OR5A1Q8NGJ0 315 aa5.73□□□□□ -1.49
NIF3L1-203ENST00000409129 LINC00474Q9P2X8 69 aa5.73□□□□□ -1.49
NIF3L1-203ENST00000409129 MUC2Q02817 5179 aa5.72□□□□□ -1.49
NIF3L1-203ENST00000409129 FAM231BA6NCW3 169 aa5.72□□□□□ -1.49
NIF3L1-203ENST00000409129 ZNF727A8MUV8 499 aa5.72□□□□□ -1.49
NIF3L1-203ENST00000409129 I3L3M4 83 aa5.72□□□□□ -1.49
NIF3L1-203ENST00000409129 S100A6P06703 90 aa5.72□□□□□ -1.49
NIF3L1-203ENST00000409129 PMCHP20382 165 aa5.72□□□□□ -1.49
NIF3L1-203ENST00000409129 XCL1P47992 114 aa5.72□□□□□ -1.49
NIF3L1-203ENST00000409129 TMEM101Q96IK0 257 aa5.72□□□□□ -1.49
NIF3L1-203ENST00000409129 BTF3L4Q96K17 158 aa5.72□□□□□ -1.49
NIF3L1-203ENST00000409129 IGHV1-58A0A0C4DH39 117 aa5.71□□□□□ -1.5
NIF3L1-203ENST00000409129 TRBV6-5A0A0K0K1A5 114 aa5.71□□□□□ -1.5
NIF3L1-203ENST00000409129 LINC00959A0A1B0GUT2 108 aa5.71□□□□□ -1.5
NIF3L1-203ENST00000409129 CCL25O15444 150 aa5.71□□□□□ -1.5
NIF3L1-203ENST00000409129 GATCO43716 136 aaKnown RBP5.71□□□□□ -1.5
NIF3L1-203ENST00000409129 KRTAP10-8P60410 259 aa5.71□□□□□ -1.5
NIF3L1-203ENST00000409129 SPINK6Q6UWN8 80 aa5.71□□□□□ -1.5
NIF3L1-203ENST00000409129 LINC01551Q86U37 167 aa5.71□□□□□ -1.5
NIF3L1-203ENST00000409129 LINC00526Q96FQ7 95 aa5.71□□□□□ -1.5
NIF3L1-203ENST00000409129 PKIGQ9Y2B9 76 aa5.71□□□□□ -1.5
NIF3L1-203ENST00000409129 A0A0J9YXV3 536 aa5.7□□□□□ -1.5
NIF3L1-203ENST00000409129 A8MWL6 223 aa5.7□□□□□ -1.5
NIF3L1-203ENST00000409129 TSHBP01222 138 aa5.7□□□□□ -1.5
NIF3L1-203ENST00000409129 ESDP10768 282 aa5.7□□□□□ -1.5
NIF3L1-203ENST00000409129 RAB14P61106 215 aa5.7□□□□□ -1.5
NIF3L1-203ENST00000409129 IFITM2Q01629 132 aa5.7□□□□□ -1.5
NIF3L1-203ENST00000409129 SRSF9Q13242 221 aaKnown RBP eCLIP5.7□□□□□ -1.5
NIF3L1-203ENST00000409129 PEA15Q15121 130 aa5.7□□□□□ -1.5
NIF3L1-203ENST00000409129 SS18Q15532 418 aa5.7□□□□□ -1.5
NIF3L1-203ENST00000409129 ADIRFQ15847 76 aa5.7□□□□□ -1.5
NIF3L1-203ENST00000409129 REG3GQ6UW15 175 aa5.7□□□□□ -1.5
NIF3L1-203ENST00000409129 CARD19Q96LW7 228 aa5.7□□□□□ -1.5
NIF3L1-203ENST00000409129 ST20Q9HBF5 79 aa5.7□□□□□ -1.5
NIF3L1-203ENST00000409129 SYCNQ0VAF6 134 aa5.69□□□□□ -1.5
NIF3L1-203ENST00000409129 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
NIF3L1-203ENST00000409129 CD164L2Q6UWJ8 174 aa5.69□□□□□ -1.5
NIF3L1-203ENST00000409129 Q6ZRP5 223 aa5.69□□□□□ -1.5
NIF3L1-203ENST00000409129 FAM231DQ6ZW35 169 aa5.69□□□□□ -1.5
NIF3L1-203ENST00000409129 MRPL52Q86TS9 123 aaKnown RBP5.69□□□□□ -1.5
NIF3L1-203ENST00000409129 MRAP2Q96G30 205 aa5.69□□□□□ -1.5
NIF3L1-203ENST00000409129 CDC42SE2Q9NRR3 84 aa5.69□□□□□ -1.5
NIF3L1-203ENST00000409129 POLR2KP53803 58 aaKnown RBP5.68□□□□□ -1.5
NIF3L1-203ENST00000409129 RPL23P62829 140 aaKnown RBP5.68□□□□□ -1.5
NIF3L1-203ENST00000409129 S100A12P80511 92 aa5.68□□□□□ -1.5
NIF3L1-203ENST00000409129 TMEM241Q24JQ0 296 aa5.68□□□□□ -1.5
NIF3L1-203ENST00000409129 ZNF664Q8N3J9 261 aa5.68□□□□□ -1.5
NIF3L1-203ENST00000409129 BORCS7Q96B45 105 aa5.68□□□□□ -1.5
NIF3L1-203ENST00000409129 TMEM242Q9NWH2 141 aa5.68□□□□□ -1.5
NIF3L1-203ENST00000409129 NAT8Q9UHE5 227 aa5.68□□□□□ -1.5
NIF3L1-203ENST00000409129 TRBV27A0A0K0K1C4 114 aa5.67□□□□□ -1.5
NIF3L1-203ENST00000409129 PTTG1IPP53801 180 aa5.67□□□□□ -1.5
NIF3L1-203ENST00000409129 KRTAP19-4Q3LI73 84 aa5.67□□□□□ -1.5
NIF3L1-203ENST00000409129 ISOC2Q96AB3 205 aa5.67□□□□□ -1.5
NIF3L1-203ENST00000409129 TMEM191AQ9H0A3 160 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms