RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 NUP35Q8NFH5 326 aa7.72□□□□□ -1.17
APOBEC3B-204ENST00000407298 TMEM191AQ9H0A3 160 aa7.72□□□□□ -1.17
APOBEC3B-204ENST00000407298 LINC00474Q9P2X8 69 aa7.72□□□□□ -1.17
APOBEC3B-204ENST00000407298 PKIGQ9Y2B9 76 aa7.72□□□□□ -1.17
APOBEC3B-204ENST00000407298 TRBV6-5A0A0K0K1A5 114 aa7.71□□□□□ -1.18
APOBEC3B-204ENST00000407298 SDHAF1A6NFY7 115 aa7.71□□□□□ -1.18
APOBEC3B-204ENST00000407298 UBE2L6O14933 153 aa7.71□□□□□ -1.18
APOBEC3B-204ENST00000407298 AMTP48728 403 aa7.71□□□□□ -1.18
APOBEC3B-204ENST00000407298 COTL1Q14019 142 aa7.71□□□□□ -1.18
APOBEC3B-204ENST00000407298 PEA15Q15121 130 aa7.71□□□□□ -1.18
APOBEC3B-204ENST00000407298 SMIM15Q7Z3B0 74 aa7.71□□□□□ -1.18
APOBEC3B-204ENST00000407298 SMDT1Q9H4I9 107 aa7.71□□□□□ -1.18
APOBEC3B-204ENST00000407298 RAB4AP20338 218 aa7.7□□□□□ -1.18
APOBEC3B-204ENST00000407298 AMN1Q8IY45 258 aa7.7□□□□□ -1.18
APOBEC3B-204ENST00000407298 STPG4Q8N801 248 aa7.7□□□□□ -1.18
APOBEC3B-204ENST00000407298 IGKV2-24A0A0C4DH68 120 aa7.69□□□□□ -1.18
APOBEC3B-204ENST00000407298 SMIM27A0A1W2PRY6 76 aa7.69□□□□□ -1.18
APOBEC3B-204ENST00000407298 BORCS7Q96B45 105 aa7.69□□□□□ -1.18
APOBEC3B-204ENST00000407298 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.68□□□□□ -1.18
APOBEC3B-204ENST00000407298 IGKV2-29A2NJV5 120 aaPredicted RBP7.68□□□□□ -1.18
APOBEC3B-204ENST00000407298 SMKR1H3BMG3 65 aa7.68□□□□□ -1.18
APOBEC3B-204ENST00000407298 NCR2O95944 276 aa7.68□□□□□ -1.18
APOBEC3B-204ENST00000407298 TSHBP01222 138 aa7.68□□□□□ -1.18
APOBEC3B-204ENST00000407298 PRSS3P2Q8NHM4 247 aa7.68□□□□□ -1.18
APOBEC3B-204ENST00000407298 NAT8BQ9UHF3 227 aa7.68□□□□□ -1.18
APOBEC3B-204ENST00000407298 GAGE12HA6NDE8 117 aa7.67□□□□□ -1.18
APOBEC3B-204ENST00000407298 APCSP02743 223 aa7.67□□□□□ -1.18
APOBEC3B-204ENST00000407298 POLR2KP53803 58 aaKnown RBP7.67□□□□□ -1.18
APOBEC3B-204ENST00000407298 RIGQ13278 110 aa7.67□□□□□ -1.18
APOBEC3B-204ENST00000407298 Q6ZRP5 223 aa7.67□□□□□ -1.18
APOBEC3B-204ENST00000407298 C15orf56Q8N910 161 aa7.67□□□□□ -1.18
APOBEC3B-204ENST00000407298 NRACQ8N912 160 aa7.67□□□□□ -1.18
APOBEC3B-204ENST00000407298 MRAP2Q96G30 205 aa7.67□□□□□ -1.18
APOBEC3B-204ENST00000407298 TMEM242Q9NWH2 141 aa7.67□□□□□ -1.18
APOBEC3B-204ENST00000407298 TRBV27A0A0K0K1C4 114 aa7.66□□□□□ -1.18
APOBEC3B-204ENST00000407298 I3L3M4 83 aa7.66□□□□□ -1.18
APOBEC3B-204ENST00000407298 ESDP10768 282 aa7.66□□□□□ -1.18
APOBEC3B-204ENST00000407298 ODF1Q14990 250 aa7.66□□□□□ -1.18
APOBEC3B-204ENST00000407298 XP32Q5T750 250 aa7.66□□□□□ -1.18
APOBEC3B-204ENST00000407298 ST20Q9HBF5 79 aa7.66□□□□□ -1.18
APOBEC3B-204ENST00000407298 A0A1B0GXF2 115 aa7.65□□□□□ -1.18
APOBEC3B-204ENST00000407298 FGF6P10767 208 aa7.65□□□□□ -1.18
APOBEC3B-204ENST00000407298 SRSF9Q13242 221 aaKnown RBP eCLIP7.65□□□□□ -1.18
APOBEC3B-204ENST00000407298 MRPL51Q4U2R6 128 aaKnown RBP7.65□□□□□ -1.18
APOBEC3B-204ENST00000407298 HIGD2BQ4VC39 106 aa7.65□□□□□ -1.18
APOBEC3B-204ENST00000407298 FAM104BQ5XKR9 115 aa7.65□□□□□ -1.18
APOBEC3B-204ENST00000407298 GVQW2A0A096LPI5 108 aaPredicted RBP7.64□□□□□ -1.19
APOBEC3B-204ENST00000407298 H7C423 109 aa7.64□□□□□ -1.19
APOBEC3B-204ENST00000407298 PMCHP20382 165 aa7.64□□□□□ -1.19
APOBEC3B-204ENST00000407298 CAMPP49913 170 aa7.64□□□□□ -1.19
APOBEC3B-204ENST00000407298 IFITM2Q01629 132 aa7.64□□□□□ -1.19
APOBEC3B-204ENST00000407298 A0A096LNI7 61 aa7.63□□□□□ -1.19
APOBEC3B-204ENST00000407298 IGKV3OR2-268A0A0C4DH90 116 aa7.63□□□□□ -1.19
APOBEC3B-204ENST00000407298 CLLU1Q5K131 121 aa7.63□□□□□ -1.19
APOBEC3B-204ENST00000407298 AMMECR1LQ6DCA0 310 aa7.63□□□□□ -1.19
APOBEC3B-204ENST00000407298 MRPL54Q6P161 138 aaKnown RBP7.63□□□□□ -1.19
APOBEC3B-204ENST00000407298 CHCHD10Q8WYQ3 142 aaPredicted RBP7.63□□□□□ -1.19
APOBEC3B-204ENST00000407298 A0A1B0GW15 77 aa7.62□□□□□ -1.19
APOBEC3B-204ENST00000407298 SUMO2P61956 95 aaKnown RBP7.62□□□□□ -1.19
APOBEC3B-204ENST00000407298 RNASEKQ6P5S7 137 aaKnown RBP7.62□□□□□ -1.19
APOBEC3B-204ENST00000407298 ZNF25P17030 456 aaPredicted RBP7.61□□□□□ -1.19
APOBEC3B-204ENST00000407298 HBBP68871 147 aa7.61□□□□□ -1.19
APOBEC3B-204ENST00000407298 MRPL52Q86TS9 123 aaKnown RBP7.61□□□□□ -1.19
APOBEC3B-204ENST00000407298 TRBV24-1A0A075B6N3 115 aa7.6□□□□□ -1.19
APOBEC3B-204ENST00000407298 C7orf77A4D0Y5 90 aa7.6□□□□□ -1.19
APOBEC3B-204ENST00000407298 VCYO14598 125 aa7.6□□□□□ -1.19
APOBEC3B-204ENST00000407298 ADCYAP1P18509 176 aa7.6□□□□□ -1.19
APOBEC3B-204ENST00000407298 RAB14P61106 215 aa7.6□□□□□ -1.19
APOBEC3B-204ENST00000407298 FOXI1Q12951 378 aa7.6□□□□□ -1.19
APOBEC3B-204ENST00000407298 ZNF664Q8N3J9 261 aa7.6□□□□□ -1.19
APOBEC3B-204ENST00000407298 OR5A1Q8NGJ0 315 aa7.6□□□□□ -1.19
APOBEC3B-204ENST00000407298 CARD19Q96LW7 228 aa7.6□□□□□ -1.19
APOBEC3B-204ENST00000407298 IGHV1-58A0A0C4DH39 117 aa7.59□□□□□ -1.19
APOBEC3B-204ENST00000407298 LINC00862A6NCI5 91 aa7.59□□□□□ -1.19
APOBEC3B-204ENST00000407298 D6R8Y8 96 aa7.59□□□□□ -1.19
APOBEC3B-204ENST00000407298 PPP1R17O96001 155 aa7.59□□□□□ -1.19
APOBEC3B-204ENST00000407298 RPL32P62910 135 aaKnown RBP7.59□□□□□ -1.19
APOBEC3B-204ENST00000407298 PNRC1Q12796 327 aaPredicted RBP7.59□□□□□ -1.19
APOBEC3B-204ENST00000407298 CDC42SE2Q9NRR3 84 aa7.59□□□□□ -1.19
APOBEC3B-204ENST00000407298 PPP1R2P9O14990 202 aa7.58□□□□□ -1.2
APOBEC3B-204ENST00000407298 TNFRSF6BO95407 300 aa7.58□□□□□ -1.2
APOBEC3B-204ENST00000407298 NPYP01303 97 aa7.58□□□□□ -1.2
APOBEC3B-204ENST00000407298 CKS2P33552 79 aa7.58□□□□□ -1.2
APOBEC3B-204ENST00000407298 ATP5L2Q7Z4Y8 100 aa7.58□□□□□ -1.2
APOBEC3B-204ENST00000407298 C20orf78Q9BR46 151 aa7.58□□□□□ -1.2
APOBEC3B-204ENST00000407298 PSORS1C2Q9UIG4 136 aa7.58□□□□□ -1.2
APOBEC3B-204ENST00000407298 UBE2D4Q9Y2X8 147 aa7.58□□□□□ -1.2
APOBEC3B-204ENST00000407298 LINC00959A0A1B0GUT2 108 aa7.57□□□□□ -1.2
APOBEC3B-204ENST00000407298 ZNF561-AS1K7EIQ3 104 aa7.57□□□□□ -1.2
APOBEC3B-204ENST00000407298 S100A8P05109 93 aa7.57□□□□□ -1.2
APOBEC3B-204ENST00000407298 FAM104AQ969W3 186 aa7.57□□□□□ -1.2
APOBEC3B-204ENST00000407298 TMEM101Q96IK0 257 aa7.57□□□□□ -1.2
APOBEC3B-204ENST00000407298 BTF3L4Q96K17 158 aa7.57□□□□□ -1.2
APOBEC3B-204ENST00000407298 SMIM2Q9BVW6 85 aa7.57□□□□□ -1.2
APOBEC3B-204ENST00000407298 F8W036 122 aa7.56□□□□□ -1.2
APOBEC3B-204ENST00000407298 CCL25O15444 150 aa7.56□□□□□ -1.2
APOBEC3B-204ENST00000407298 MT-ND6P03923 174 aa7.56□□□□□ -1.2
APOBEC3B-204ENST00000407298 FCER1GP30273 86 aa7.56□□□□□ -1.2
APOBEC3B-204ENST00000407298 XCL1P47992 114 aa7.56□□□□□ -1.2
APOBEC3B-204ENST00000407298 SYCNQ0VAF6 134 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms