RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 KLK9Q2XQG4 91 aa6.96□□□□□ -1.29
SMC1B-202ENST00000404354 CITED2Q99967 270 aaPredicted RBP6.96□□□□□ -1.29
SMC1B-202ENST00000404354 TMEM101Q96IK0 257 aa6.96□□□□□ -1.3
SMC1B-202ENST00000404354 UBE2E2Q96LR5 201 aa6.96□□□□□ -1.3
SMC1B-202ENST00000404354 LINC01587Q99440 93 aa6.96□□□□□ -1.3
SMC1B-202ENST00000404354 NBEAL2Q6ZNJ1 2754 aa6.96□□□□□ -1.3
SMC1B-202ENST00000404354 PIEZO1Q92508 2521 aa6.96□□□□□ -1.3
SMC1B-202ENST00000404354 A6NDX4 124 aa6.96□□□□□ -1.3
SMC1B-202ENST00000404354 ATP5J2P56134 94 aa6.96□□□□□ -1.3
SMC1B-202ENST00000404354 K7EQG2 157 aa6.95□□□□□ -1.3
SMC1B-202ENST00000404354 C11orf44Q8N8P7 122 aa6.95□□□□□ -1.3
SMC1B-202ENST00000404354 PKD1L2Q7Z442 2459 aa6.95□□□□□ -1.3
SMC1B-202ENST00000404354 IGLV1-40P01703 118 aa6.95□□□□□ -1.3
SMC1B-202ENST00000404354 SLURP1P55000 103 aa6.95□□□□□ -1.3
SMC1B-202ENST00000404354 MRPL23Q16540 153 aaKnown RBP6.95□□□□□ -1.3
SMC1B-202ENST00000404354 SMCR5Q8TEV8 140 aa6.95□□□□□ -1.3
SMC1B-202ENST00000404354 CHCHD7Q9BUK0 85 aa6.95□□□□□ -1.3
SMC1B-202ENST00000404354 TOMM7Q9P0U1 55 aa6.95□□□□□ -1.3
SMC1B-202ENST00000404354 UBE2D4Q9Y2X8 147 aa6.95□□□□□ -1.3
SMC1B-202ENST00000404354 MTORP42345 2549 aa6.95□□□□□ -1.3
SMC1B-202ENST00000404354 LINC00694P0DN24 101 aa6.95□□□□□ -1.3
SMC1B-202ENST00000404354 PRIMA1Q86XR5 153 aa6.95□□□□□ -1.3
SMC1B-202ENST00000404354 XCL2Q9UBD3 114 aa6.95□□□□□ -1.3
SMC1B-202ENST00000404354 DAZ2Q13117 558 aaKnown RBP6.94□□□□□ -1.3
SMC1B-202ENST00000404354 GAGE2AQ6NT46 116 aa6.94□□□□□ -1.3
SMC1B-202ENST00000404354 SOSTDC1Q6X4U4 206 aa6.94□□□□□ -1.3
SMC1B-202ENST00000404354 DAZ4Q86SG3 579 aaKnown RBP6.94□□□□□ -1.3
SMC1B-202ENST00000404354 DAZ3Q9NR90 486 aaKnown RBP6.94□□□□□ -1.3
SMC1B-202ENST00000404354 DEFB112Q30KQ8 113 aa6.94□□□□□ -1.3
SMC1B-202ENST00000404354 H3BT86 120 aa6.94□□□□□ -1.3
SMC1B-202ENST00000404354 LINC00308Q8TCZ7 52 aa6.94□□□□□ -1.3
SMC1B-202ENST00000404354 PPDPFQ9H3Y8 114 aa6.94□□□□□ -1.3
SMC1B-202ENST00000404354 GNLYP22749 145 aa6.93□□□□□ -1.3
SMC1B-202ENST00000404354 RBMY1BA6NDE4 496 aaKnown RBP6.93□□□□□ -1.3
SMC1B-202ENST00000404354 RBMY1EA6NEQ0 496 aaKnown RBP6.93□□□□□ -1.3
SMC1B-202ENST00000404354 RBMY1DP0C7P1 496 aaKnown RBP6.93□□□□□ -1.3
SMC1B-202ENST00000404354 BAALC-AS2P0C853 105 aa6.93□□□□□ -1.3
SMC1B-202ENST00000404354 CIRBPQ14011 172 aaKnown RBP6.93□□□□□ -1.3
SMC1B-202ENST00000404354 FAM218AQ96MZ4 157 aa6.93□□□□□ -1.3
SMC1B-202ENST00000404354 LOC107984640A0A0U1RRK4 108 aa6.93□□□□□ -1.3
SMC1B-202ENST00000404354 PIMREGQ9BSJ6 248 aa6.93□□□□□ -1.3
SMC1B-202ENST00000404354 TINCRA0A1B0GVN0 87 aa6.92□□□□□ -1.3
SMC1B-202ENST00000404354 SPANXDQ9BXN6 97 aa6.92□□□□□ -1.3
SMC1B-202ENST00000404354 SPANXCQ9NY87 97 aa6.92□□□□□ -1.3
SMC1B-202ENST00000404354 PSMB8P28062 276 aa6.92□□□□□ -1.3
SMC1B-202ENST00000404354 C9orf153Q5TBE3 101 aa6.92□□□□□ -1.3
SMC1B-202ENST00000404354 CCL19Q99731 98 aa6.92□□□□□ -1.3
SMC1B-202ENST00000404354 C11orf68Q9H3H3 251 aaKnown RBP6.92□□□□□ -1.3
SMC1B-202ENST00000404354 K7EMT4 169 aa6.91□□□□□ -1.3
SMC1B-202ENST00000404354 ATP5G1P05496 136 aa6.91□□□□□ -1.3
SMC1B-202ENST00000404354 YAE1D1Q9NRH1 226 aa6.91□□□□□ -1.3
SMC1B-202ENST00000404354 TRGV1A0A0A0MS02 117 aa6.91□□□□□ -1.3
SMC1B-202ENST00000404354 MSMBP08118 114 aa6.91□□□□□ -1.3
SMC1B-202ENST00000404354 PYGO1Q9Y3Y4 419 aa6.91□□□□□ -1.3
SMC1B-202ENST00000404354 ACANP16112 2415 aa6.91□□□□□ -1.3
SMC1B-202ENST00000404354 IGKV3D-7A0A0C4DH55 119 aa6.9□□□□□ -1.3
SMC1B-202ENST00000404354 NBL1P41271 181 aa6.9□□□□□ -1.3
SMC1B-202ENST00000404354 LINC00242Q5T6M2 205 aa6.9□□□□□ -1.3
SMC1B-202ENST00000404354 Q6Q795 121 aa6.9□□□□□ -1.3
SMC1B-202ENST00000404354 M0QXV9 152 aa6.9□□□□□ -1.31
SMC1B-202ENST00000404354 C9orf129Q5T035 196 aaKnown RBP6.9□□□□□ -1.31
SMC1B-202ENST00000404354 SDIM1Q6ZPB5 146 aa6.9□□□□□ -1.31
SMC1B-202ENST00000404354 EDA2RQ9HAV5 297 aa6.9□□□□□ -1.31
SMC1B-202ENST00000404354 H3BUA1 57 aa6.89□□□□□ -1.31
SMC1B-202ENST00000404354 BRI3O95415 125 aa6.89□□□□□ -1.31
SMC1B-202ENST00000404354 TIRAPP58753 221 aa6.89□□□□□ -1.31
SMC1B-202ENST00000404354 AKAP9Q99996 3911 aa6.89□□□□□ -1.31
SMC1B-202ENST00000404354 SLPIP03973 132 aa6.89□□□□□ -1.31
SMC1B-202ENST00000404354 SPANXA1Q9NS26 97 aa6.89□□□□□ -1.31
SMC1B-202ENST00000404354 DOPEY1Q5JWR5 2465 aa6.89□□□□□ -1.31
SMC1B-202ENST00000404354 COX7A2LO14548 114 aa6.88□□□□□ -1.31
SMC1B-202ENST00000404354 PFN2P35080 140 aa6.88□□□□□ -1.31
SMC1B-202ENST00000404354 C10orf105Q8TEF2 133 aa6.88□□□□□ -1.31
SMC1B-202ENST00000404354 A0A1W2PRX2 142 aa6.88□□□□□ -1.31
SMC1B-202ENST00000404354 PLA2G2AP14555 144 aa6.88□□□□□ -1.31
SMC1B-202ENST00000404354 FAM110AQ9BQ89 295 aa6.88□□□□□ -1.31
SMC1B-202ENST00000404354 C14orf132Q9NPU4 83 aa6.88□□□□□ -1.31
SMC1B-202ENST00000404354 NDUFA1O15239 70 aa6.88□□□□□ -1.31
SMC1B-202ENST00000404354 ZNF415Q09FC8 603 aa6.88□□□□□ -1.31
SMC1B-202ENST00000404354 GCN1Q92616 2671 aaKnown RBP6.88□□□□□ -1.31
SMC1B-202ENST00000404354 A0A087WVE0 104 aa6.87□□□□□ -1.31
SMC1B-202ENST00000404354 OR13C6PQ8NH95 151 aa6.87□□□□□ -1.31
SMC1B-202ENST00000404354 SMIM1B2RUZ4 78 aa6.87□□□□□ -1.31
SMC1B-202ENST00000404354 Q96MF0 132 aa6.87□□□□□ -1.31
SMC1B-202ENST00000404354 SETXQ7Z333 2677 aaKnown RBP6.87□□□□□ -1.31
SMC1B-202ENST00000404354 LOC100131303A0A0U1RQF7 123 aa6.86□□□□□ -1.31
SMC1B-202ENST00000404354 RNASE1P07998 156 aaKnown RBP6.86□□□□□ -1.31
SMC1B-202ENST00000404354 LINC00158P58513 81 aa6.86□□□□□ -1.31
SMC1B-202ENST00000404354 Q6ZTI0 123 aa6.86□□□□□ -1.31
SMC1B-202ENST00000404354 MIR7-3HGQ8N6C7 128 aa6.86□□□□□ -1.31
SMC1B-202ENST00000404354 DYNLRB2Q8TF09 96 aa6.86□□□□□ -1.31
SMC1B-202ENST00000404354 HERVK_113P63121 156 aa6.86□□□□□ -1.31
SMC1B-202ENST00000404354 VPREB3Q9UKI3 123 aa6.86□□□□□ -1.31
SMC1B-202ENST00000404354 hADV29S1A0JD25 119 aa6.85□□□□□ -1.31
SMC1B-202ENST00000404354 NTM-AS1Q6ZSK4 140 aa6.85□□□□□ -1.31
SMC1B-202ENST00000404354 A0A087WYN8 130 aa6.85□□□□□ -1.31
SMC1B-202ENST00000404354 TRBV7-7A0A0K0K1E9 115 aa6.85□□□□□ -1.31
SMC1B-202ENST00000404354 LINC00337Q8N6G1 96 aa6.84□□□□□ -1.31
SMC1B-202ENST00000404354 CYSTM1Q9H1C7 97 aa6.84□□□□□ -1.31
SMC1B-202ENST00000404354 HIVEP2P31629 2446 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms