RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 BTF3L4Q96K17 158 aa9.19□□□□□ -0.94
HLA-DQB1-202ENST00000399079 C14orf177Q52M58 125 aa9.18□□□□□ -0.94
HLA-DQB1-202ENST00000399079 TMEM136Q6ZRR5 245 aa9.18□□□□□ -0.94
HLA-DQB1-202ENST00000399079 OR5A1Q8NGJ0 315 aa9.18□□□□□ -0.94
HLA-DQB1-202ENST00000399079 GAGE12HA6NDE8 117 aa9.17□□□□□ -0.94
HLA-DQB1-202ENST00000399079 PPBPP02775 128 aa9.17□□□□□ -0.94
HLA-DQB1-202ENST00000399079 MRPL52Q86TS9 123 aaKnown RBP9.17□□□□□ -0.94
HLA-DQB1-202ENST00000399079 ORMDL3Q8N138 153 aa9.17□□□□□ -0.94
HLA-DQB1-202ENST00000399079 CHCHD10Q8WYQ3 142 aaPredicted RBP9.17□□□□□ -0.94
HLA-DQB1-202ENST00000399079 SMIM2Q9BVW6 85 aa9.17□□□□□ -0.94
HLA-DQB1-202ENST00000399079 RPL32P62910 135 aaKnown RBP9.16□□□□□ -0.94
HLA-DQB1-202ENST00000399079 PRELID3AQ96N28 172 aa9.16□□□□□ -0.94
HLA-DQB1-202ENST00000399079 CDC42SE2Q9NRR3 84 aa9.16□□□□□ -0.94
HLA-DQB1-202ENST00000399079 TCAPO15273 167 aa9.15□□□□□ -0.94
HLA-DQB1-202ENST00000399079 SMR3BP02814 79 aaPredicted RBP9.15□□□□□ -0.94
HLA-DQB1-202ENST00000399079 ZNF664Q8N3J9 261 aa9.15□□□□□ -0.94
HLA-DQB1-202ENST00000399079 IMMP2LQ96T52 175 aa9.15□□□□□ -0.94
HLA-DQB1-202ENST00000399079 CTDSP1Q9GZU7 261 aa9.15□□□□□ -0.94
HLA-DQB1-202ENST00000399079 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
HLA-DQB1-202ENST00000399079 ABCA13Q86UQ4 5058 aa9.15□□□□□ -0.95
HLA-DQB1-202ENST00000399079 LINC00959A0A1B0GUT2 108 aa9.15□□□□□ -0.95
HLA-DQB1-202ENST00000399079 PHOX2AO14813 284 aa9.15□□□□□ -0.95
HLA-DQB1-202ENST00000399079 RPL39P62891 51 aaKnown RBP9.15□□□□□ -0.95
HLA-DQB1-202ENST00000399079 RNASE13Q5GAN3 156 aaKnown RBP9.15□□□□□ -0.95
HLA-DQB1-202ENST00000399079 C10orf91Q5T1B1 145 aa9.15□□□□□ -0.95
HLA-DQB1-202ENST00000399079 DGAT2L7PQ6IED9 249 aa9.15□□□□□ -0.95
HLA-DQB1-202ENST00000399079 Q6ZSA8 131 aa9.15□□□□□ -0.95
HLA-DQB1-202ENST00000399079 DNAH8Q96JB1 4490 aa9.14□□□□□ -0.95
HLA-DQB1-202ENST00000399079 hDV102S1A0JD36 115 aa9.14□□□□□ -0.95
HLA-DQB1-202ENST00000399079 XCL1P47992 114 aa9.14□□□□□ -0.95
HLA-DQB1-202ENST00000399079 FAT1Q14517 4588 aa9.13□□□□□ -0.95
HLA-DQB1-202ENST00000399079 LOC389332A0A1B0GUA5 103 aa9.13□□□□□ -0.95
HLA-DQB1-202ENST00000399079 C15orf56Q8N910 161 aa9.13□□□□□ -0.95
HLA-DQB1-202ENST00000399079 CLRN3Q8NCR9 226 aa9.13□□□□□ -0.95
HLA-DQB1-202ENST00000399079 CCL25O15444 150 aa9.12□□□□□ -0.95
HLA-DQB1-202ENST00000399079 SLPIP03973 132 aa9.12□□□□□ -0.95
HLA-DQB1-202ENST00000399079 FOXI1Q12951 378 aa9.12□□□□□ -0.95
HLA-DQB1-202ENST00000399079 CARHSP1Q9Y2V2 147 aaKnown RBP9.12□□□□□ -0.95
HLA-DQB1-202ENST00000399079 CSDC2Q9Y534 153 aaKnown RBP9.12□□□□□ -0.95
HLA-DQB1-202ENST00000399079 Q6ZUT4 128 aa9.11□□□□□ -0.95
HLA-DQB1-202ENST00000399079 TMEM18Q96B42 140 aa9.11□□□□□ -0.95
HLA-DQB1-202ENST00000399079 RAB5AP20339 215 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 SS18Q15532 418 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 HIGD2BQ4VC39 106 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 C9orf163Q8N9P6 203 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 FAM104AQ969W3 186 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 OPRPNQ99935 248 aaPredicted RBP9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 RPS10P5Q9NQ39 176 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 LAMTOR2Q9Y2Q5 125 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 TRAV9-1A0A075B6T8 112 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 TRAV13-1A0A0B4J241 112 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 PRSS47A8MTI9 375 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 EPM2AB3EWF7 344 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 SMAGPQ0VAQ4 97 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 KIAA1644Q3SXP7 199 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 SCXQ7RTU7 201 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 TIMM21Q9BVV7 248 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 MAP1LC3AQ9H492 121 aa9.1□□□□□ -0.95
HLA-DQB1-202ENST00000399079 S100PP25815 95 aa9.09□□□□□ -0.95
HLA-DQB1-202ENST00000399079 CNBPP62633 177 aaKnown RBP9.09□□□□□ -0.95
HLA-DQB1-202ENST00000399079 Q5VSD8 79 aa9.09□□□□□ -0.95
HLA-DQB1-202ENST00000399079 APOC3P02656 99 aa9.08□□□□□ -0.96
HLA-DQB1-202ENST00000399079 RHEBQ15382 184 aa9.08□□□□□ -0.96
HLA-DQB1-202ENST00000399079 CFAP161Q6P656 301 aa9.08□□□□□ -0.96
HLA-DQB1-202ENST00000399079 CD164L2Q6UWJ8 174 aa9.08□□□□□ -0.96
HLA-DQB1-202ENST00000399079 SLC7A5P1Q8MH63 180 aa9.08□□□□□ -0.96
HLA-DQB1-202ENST00000399079 CHAC1Q9BUX1 264 aa9.08□□□□□ -0.96
HLA-DQB1-202ENST00000399079 AP5S1Q9NUS5 200 aa9.08□□□□□ -0.96
HLA-DQB1-202ENST00000399079 C1orf196B1AJZ1 125 aa9.07□□□□□ -0.96
HLA-DQB1-202ENST00000399079 Q8N8P6 123 aa9.07□□□□□ -0.96
HLA-DQB1-202ENST00000399079 SPANXA1Q9NS26 97 aa9.07□□□□□ -0.96
HLA-DQB1-202ENST00000399079 SDIM1Q6ZPB5 146 aa9.06□□□□□ -0.96
HLA-DQB1-202ENST00000399079 CIRBP-AS1Q8TBR5 109 aa9.06□□□□□ -0.96
HLA-DQB1-202ENST00000399079 LINC00526Q96FQ7 95 aa9.06□□□□□ -0.96
HLA-DQB1-202ENST00000399079 GVQW2A0A096LPI5 108 aaPredicted RBP9.05□□□□□ -0.96
HLA-DQB1-202ENST00000399079 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.05□□□□□ -0.96
HLA-DQB1-202ENST00000399079 PANO1I0J062 215 aa9.05□□□□□ -0.96
HLA-DQB1-202ENST00000399079 IFI27P40305 119 aaPredicted RBP9.05□□□□□ -0.96
HLA-DQB1-202ENST00000399079 GNB1LQ9BYB4 327 aa9.05□□□□□ -0.96
HLA-DQB1-202ENST00000399079 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.05□□□□□ -0.96
HLA-DQB1-202ENST00000399079 SRRM2Q9UQ35 2752 aaKnown RBP9.05□□□□□ -0.96
HLA-DQB1-202ENST00000399079 MRPS36P82909 103 aaKnown RBP9.05□□□□□ -0.96
HLA-DQB1-202ENST00000399079 FAM229AH3BQW9 127 aa9.04□□□□□ -0.96
HLA-DQB1-202ENST00000399079 C2orf66Q6UXQ4 117 aa9.04□□□□□ -0.96
HLA-DQB1-202ENST00000399079 NXT2Q9NPJ8 142 aaKnown RBP9.04□□□□□ -0.96
HLA-DQB1-202ENST00000399079 VPS13BQ7Z7G8 4022 aa9.03□□□□□ -0.96
HLA-DQB1-202ENST00000399079 IGHV1-58A0A0C4DH39 117 aa9.03□□□□□ -0.96
HLA-DQB1-202ENST00000399079 COX7A2LO14548 114 aa9.03□□□□□ -0.96
HLA-DQB1-202ENST00000399079 C5orf38Q86SI9 138 aa9.03□□□□□ -0.96
HLA-DQB1-202ENST00000399079 PYGO1Q9Y3Y4 419 aa9.03□□□□□ -0.96
HLA-DQB1-202ENST00000399079 IGLV4-3A0A075B6K6 122 aa9.02□□□□□ -0.97
HLA-DQB1-202ENST00000399079 IGHV3-64A0A075B6Q5 118 aa9.02□□□□□ -0.97
HLA-DQB1-202ENST00000399079 TGIF2-C20orf24A0A0A6YYL0 155 aa9.02□□□□□ -0.97
HLA-DQB1-202ENST00000399079 IFITM10A6NMD0 228 aa9.02□□□□□ -0.97
HLA-DQB1-202ENST00000399079 SNAPINO95295 136 aa9.02□□□□□ -0.97
HLA-DQB1-202ENST00000399079 MALP21145 153 aa9.02□□□□□ -0.97
HLA-DQB1-202ENST00000399079 ORMDL2Q53FV1 153 aa9.02□□□□□ -0.97
HLA-DQB1-202ENST00000399079 LINC00528Q8N1L1 170 aa9.02□□□□□ -0.97
HLA-DQB1-202ENST00000399079 SVBPQ8N300 66 aa9.02□□□□□ -0.97
HLA-DQB1-202ENST00000399079 ALKBH7Q9BT30 221 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms