RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 C5orf38Q86SI9 138 aa10.89□□□□□ -0.67
RPRD1A-202ENST00000399022 U3KQE9 123 aa10.89□□□□□ -0.67
RPRD1A-202ENST00000399022 TMEM61Q8N0U2 210 aa10.89□□□□□ -0.67
RPRD1A-202ENST00000399022 IMUPQ9GZP8 106 aa10.89□□□□□ -0.67
RPRD1A-202ENST00000399022 TRAV23DV6A0A075B6W5 121 aa10.89□□□□□ -0.67
RPRD1A-202ENST00000399022 C20orf197Q8N268 126 aa10.89□□□□□ -0.67
RPRD1A-202ENST00000399022 PRORYQ9H606 182 aa10.89□□□□□ -0.67
RPRD1A-202ENST00000399022 SS18Q15532 418 aa10.88□□□□□ -0.67
RPRD1A-202ENST00000399022 ACANP16112 2415 aa10.88□□□□□ -0.67
RPRD1A-202ENST00000399022 PSMB8P28062 276 aa10.88□□□□□ -0.67
RPRD1A-202ENST00000399022 POLR2KP53803 58 aaKnown RBP10.88□□□□□ -0.67
RPRD1A-202ENST00000399022 DEFB113Q30KQ7 82 aa10.88□□□□□ -0.67
RPRD1A-202ENST00000399022 GPHB5Q86YW7 130 aa10.88□□□□□ -0.67
RPRD1A-202ENST00000399022 MIR7-3HGQ8N6C7 128 aa10.88□□□□□ -0.67
RPRD1A-202ENST00000399022 IGHV4-4A0A075B6R2 117 aa10.87□□□□□ -0.67
RPRD1A-202ENST00000399022 TRBV27A0A0K0K1C4 114 aa10.87□□□□□ -0.67
RPRD1A-202ENST00000399022 RNASE3P12724 160 aaKnown RBP10.87□□□□□ -0.67
RPRD1A-202ENST00000399022 HIST2H2BDQ6DRA6 164 aa10.87□□□□□ -0.67
RPRD1A-202ENST00000399022 MRGPRG-AS1Q2M3A8 158 aa10.87□□□□□ -0.67
RPRD1A-202ENST00000399022 IGIPA6NJ69 53 aa10.87□□□□□ -0.67
RPRD1A-202ENST00000399022 COX7CP15954 63 aa10.87□□□□□ -0.67
RPRD1A-202ENST00000399022 PPDPFQ9H3Y8 114 aa10.87□□□□□ -0.67
RPRD1A-202ENST00000399022 K7EMT4 169 aa10.87□□□□□ -0.67
RPRD1A-202ENST00000399022 Q6ZSV7 163 aa10.87□□□□□ -0.67
RPRD1A-202ENST00000399022 DSCR8Q96T75 97 aa10.86□□□□□ -0.67
RPRD1A-202ENST00000399022 M0QY20 66 aa10.86□□□□□ -0.67
RPRD1A-202ENST00000399022 LINC00308Q8TCZ7 52 aa10.86□□□□□ -0.67
RPRD1A-202ENST00000399022 KLK5Q9Y337 293 aaPredicted RBP10.86□□□□□ -0.67
RPRD1A-202ENST00000399022 PTPRBP23467 1997 aa10.86□□□□□ -0.67
RPRD1A-202ENST00000399022 IGLV4-69A0A075B6H9 119 aa10.85□□□□□ -0.67
RPRD1A-202ENST00000399022 HIST2H2BCQ6DN03 193 aa10.85□□□□□ -0.67
RPRD1A-202ENST00000399022 A0A0J9YX75 114 aa10.84□□□□□ -0.67
RPRD1A-202ENST00000399022 CCL24O00175 119 aa10.84□□□□□ -0.67
RPRD1A-202ENST00000399022 LOC107984640A0A0U1RRK4 108 aa10.84□□□□□ -0.67
RPRD1A-202ENST00000399022 F8W735 103 aaPredicted RBP10.84□□□□□ -0.67
RPRD1A-202ENST00000399022 PIK3CD-AS1Q5SR53 167 aa10.84□□□□□ -0.67
RPRD1A-202ENST00000399022 CLPSL2Q6UWE3 100 aa10.84□□□□□ -0.67
RPRD1A-202ENST00000399022 SMIM9A6NGZ8 99 aa10.83□□□□□ -0.68
RPRD1A-202ENST00000399022 CMC4P56277 68 aaPredicted RBP10.83□□□□□ -0.68
RPRD1A-202ENST00000399022 DSPP15924 2871 aaKnown RBP10.83□□□□□ -0.68
RPRD1A-202ENST00000399022 NOP10Q9NPE3 64 aaKnown RBP10.83□□□□□ -0.68
RPRD1A-202ENST00000399022 FASNP49327 2511 aaKnown RBP10.83□□□□□ -0.68
RPRD1A-202ENST00000399022 FAM240AA0A1B0GVK7 77 aa10.83□□□□□ -0.68
RPRD1A-202ENST00000399022 XCL1P47992 114 aa10.83□□□□□ -0.68
RPRD1A-202ENST00000399022 TMEM258P61165 79 aa10.83□□□□□ -0.68
RPRD1A-202ENST00000399022 RNF152Q8N8N0 203 aa10.83□□□□□ -0.68
RPRD1A-202ENST00000399022 TIRAPP58753 221 aa10.82□□□□□ -0.68
RPRD1A-202ENST00000399022 CLPSL1A2RUU4 121 aa10.82□□□□□ -0.68
RPRD1A-202ENST00000399022 COX8CQ7Z4L0 72 aa10.82□□□□□ -0.68
RPRD1A-202ENST00000399022 COX7B2Q8TF08 81 aa10.82□□□□□ -0.68
RPRD1A-202ENST00000399022 ZNF580Q9UK33 172 aa10.82□□□□□ -0.68
RPRD1A-202ENST00000399022 CENPEQ02224 2701 aa10.82□□□□□ -0.68
RPRD1A-202ENST00000399022 LRRC75A-AS1Q8N1F1 130 aa10.81□□□□□ -0.68
RPRD1A-202ENST00000399022 SERP2Q8N6R1 65 aa10.81□□□□□ -0.68
RPRD1A-202ENST00000399022 A0A096LPF7 62 aa10.81□□□□□ -0.68
RPRD1A-202ENST00000399022 USP17L23D6RBM5 183 aa10.81□□□□□ -0.68
RPRD1A-202ENST00000399022 RPL18AQ02543 176 aaKnown RBP10.81□□□□□ -0.68
RPRD1A-202ENST00000399022 LINC00467Q9BRT7 94 aa10.81□□□□□ -0.68
RPRD1A-202ENST00000399022 FRYLO94915 3013 aa10.8□□□□□ -0.68
RPRD1A-202ENST00000399022 TRBV6-5A0A0K0K1A5 114 aa10.8□□□□□ -0.68
RPRD1A-202ENST00000399022 AVPP01185 164 aa10.8□□□□□ -0.68
RPRD1A-202ENST00000399022 TSHBP01222 138 aa10.8□□□□□ -0.68
RPRD1A-202ENST00000399022 SLPIP03973 132 aa10.8□□□□□ -0.68
RPRD1A-202ENST00000399022 PROK1P58294 105 aa10.8□□□□□ -0.68
RPRD1A-202ENST00000399022 FAM19A5Q7Z5A7 132 aaPredicted RBP10.8□□□□□ -0.68
RPRD1A-202ENST00000399022 POM121L12Q8N7R1 296 aa10.8□□□□□ -0.68
RPRD1A-202ENST00000399022 PSMG3-AS1Q96PY0 264 aa10.8□□□□□ -0.68
RPRD1A-202ENST00000399022 REV3LO60673 3130 aa10.8□□□□□ -0.68
RPRD1A-202ENST00000399022 PKIGQ9Y2B9 76 aa10.8□□□□□ -0.68
RPRD1A-202ENST00000399022 DOPEY1Q5JWR5 2465 aa10.8□□□□□ -0.68
RPRD1A-202ENST00000399022 BRK1Q8WUW1 75 aa10.79□□□□□ -0.68
RPRD1A-202ENST00000399022 ODF3Q96PU9 254 aa10.79□□□□□ -0.68
RPRD1A-202ENST00000399022 JMJD7-PLA2G4BH0Y9G9 81 aa10.79□□□□□ -0.68
RPRD1A-202ENST00000399022 NCR3O14931 201 aa10.79□□□□□ -0.68
RPRD1A-202ENST00000399022 ANKRD17O75179 2603 aaKnown RBP10.79□□□□□ -0.68
RPRD1A-202ENST00000399022 HRCT1Q6UXD1 115 aa10.78□□□□□ -0.68
RPRD1A-202ENST00000399022 TRAV25A0A0B4J276 109 aa10.78□□□□□ -0.68
RPRD1A-202ENST00000399022 EDN2P20800 178 aa10.78□□□□□ -0.68
RPRD1A-202ENST00000399022 LINC00526Q96FQ7 95 aa10.78□□□□□ -0.68
RPRD1A-202ENST00000399022 F5H768 121 aa10.78□□□□□ -0.68
RPRD1A-202ENST00000399022 CRYGDP07320 174 aa10.78□□□□□ -0.68
RPRD1A-202ENST00000399022 FAM236DA0A1B0GTK5 79 aa10.77□□□□□ -0.69
RPRD1A-202ENST00000399022 K7EQG2 157 aa10.77□□□□□ -0.69
RPRD1A-202ENST00000399022 NDUFA1O15239 70 aa10.77□□□□□ -0.69
RPRD1A-202ENST00000399022 FAM236CP0DP71 79 aa10.77□□□□□ -0.69
RPRD1A-202ENST00000399022 ADAMTSL4-AS1Q5T5F5 129 aa10.76□□□□□ -0.69
RPRD1A-202ENST00000399022 CITED2Q99967 270 aaPredicted RBP10.76□□□□□ -0.69
RPRD1A-202ENST00000399022 NBEAQ8NFP9 2946 aa10.76□□□□□ -0.69
RPRD1A-202ENST00000399022 J3QKU1 62 aa10.76□□□□□ -0.69
RPRD1A-202ENST00000399022 ENHOQ6UWT2 76 aa10.76□□□□□ -0.69
RPRD1A-202ENST00000399022 ZNF292O60281 2723 aa10.75□□□□□ -0.69
RPRD1A-202ENST00000399022 DAD1P61803 113 aa10.75□□□□□ -0.69
RPRD1A-202ENST00000399022 COL6A3P12111 3177 aa10.75□□□□□ -0.69
RPRD1A-202ENST00000399022 PRM2P04554 102 aa10.75□□□□□ -0.69
RPRD1A-202ENST00000399022 UPK3BQ9BT76 320 aa10.75□□□□□ -0.69
RPRD1A-202ENST00000399022 CSDC2Q9Y534 153 aaKnown RBP10.75□□□□□ -0.69
RPRD1A-202ENST00000399022 FHL3Q13643 280 aa10.74□□□□□ -0.69
RPRD1A-202ENST00000399022 PYGO1Q9Y3Y4 419 aa10.74□□□□□ -0.69
RPRD1A-202ENST00000399022 A0A087WVE0 104 aa10.74□□□□□ -0.69
RPRD1A-202ENST00000399022 MAP1AP78559 2803 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms