RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 CIRBP-AS1Q8TBR5 109 aa3.95□□□□□ -1.78
PTPN20-208ENST00000395727 DEFB104AQ8WTQ1 72 aa3.95□□□□□ -1.78
PTPN20-208ENST00000395727 DMBT1Q9UGM3 2413 aaPredicted RBP3.94□□□□□ -1.78
PTPN20-208ENST00000395727 SRRM2Q9UQ35 2752 aaKnown RBP3.94□□□□□ -1.78
PTPN20-208ENST00000395727 IGLV4-60A0A075B6I1 120 aa3.94□□□□□ -1.78
PTPN20-208ENST00000395727 KRTAP29-1A8MX34 341 aaPredicted RBP3.94□□□□□ -1.78
PTPN20-208ENST00000395727 GATCO43716 136 aaKnown RBP3.94□□□□□ -1.78
PTPN20-208ENST00000395727 PRSS2P07478 247 aa3.94□□□□□ -1.78
PTPN20-208ENST00000395727 ZNF25P17030 456 aaPredicted RBP3.94□□□□□ -1.78
PTPN20-208ENST00000395727 SSTP61278 116 aa3.94□□□□□ -1.78
PTPN20-208ENST00000395727 LINC01620Q4KN68 170 aa3.94□□□□□ -1.78
PTPN20-208ENST00000395727 TSKUQ8WUA8 353 aa3.94□□□□□ -1.78
PTPN20-208ENST00000395727 RNF185Q96GF1 192 aa3.94□□□□□ -1.78
PTPN20-208ENST00000395727 SMIM7Q9BQ49 75 aa3.94□□□□□ -1.78
PTPN20-208ENST00000395727 TMEM191AQ9H0A3 160 aa3.94□□□□□ -1.78
PTPN20-208ENST00000395727 OSTCQ9NRP0 149 aa3.94□□□□□ -1.78
PTPN20-208ENST00000395727 A0A1B0GUT8 65 aa3.93□□□□□ -1.78
PTPN20-208ENST00000395727 SDHAF1A6NFY7 115 aa3.93□□□□□ -1.78
PTPN20-208ENST00000395727 UBE2L6O14933 153 aa3.93□□□□□ -1.78
PTPN20-208ENST00000395727 CLPSL2Q6UWE3 100 aa3.93□□□□□ -1.78
PTPN20-208ENST00000395727 SDIM1Q6ZPB5 146 aa3.93□□□□□ -1.78
PTPN20-208ENST00000395727 BORCS7Q96B45 105 aa3.93□□□□□ -1.78
PTPN20-208ENST00000395727 SMDT1Q9H4I9 107 aa3.93□□□□□ -1.78
PTPN20-208ENST00000395727 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.92□□□□□ -1.78
PTPN20-208ENST00000395727 TRAV26-2A0A0B4J265 109 aa3.92□□□□□ -1.78
PTPN20-208ENST00000395727 TRBV27A0A0K0K1C4 114 aa3.92□□□□□ -1.78
PTPN20-208ENST00000395727 ZNF727A8MUV8 499 aa3.92□□□□□ -1.78
PTPN20-208ENST00000395727 I3L3M4 83 aa3.92□□□□□ -1.78
PTPN20-208ENST00000395727 PPP1R17O96001 155 aa3.92□□□□□ -1.78
PTPN20-208ENST00000395727 OXTP01178 125 aa3.92□□□□□ -1.78
PTPN20-208ENST00000395727 APCSP02743 223 aa3.92□□□□□ -1.78
PTPN20-208ENST00000395727 SRP19P09132 144 aaKnown RBP3.92□□□□□ -1.78
PTPN20-208ENST00000395727 ESDP10768 282 aa3.92□□□□□ -1.78
PTPN20-208ENST00000395727 POLR2KP53803 58 aaKnown RBP3.92□□□□□ -1.78
PTPN20-208ENST00000395727 FAM74A3Q4VXF1 159 aa3.92□□□□□ -1.78
PTPN20-208ENST00000395727 MRPL52Q86TS9 123 aaKnown RBP3.92□□□□□ -1.78
PTPN20-208ENST00000395727 C15orf56Q8N910 161 aa3.92□□□□□ -1.78
PTPN20-208ENST00000395727 RPL39LQ96EH5 51 aaKnown RBP3.92□□□□□ -1.78
PTPN20-208ENST00000395727 MRAP2Q96G30 205 aa3.92□□□□□ -1.78
PTPN20-208ENST00000395727 EIF5A2Q9GZV4 153 aaKnown RBP3.92□□□□□ -1.78
PTPN20-208ENST00000395727 FAT1Q14517 4588 aa3.91□□□□□ -1.78
PTPN20-208ENST00000395727 IGLV10-54A0A075B6I4 117 aa3.91□□□□□ -1.78
PTPN20-208ENST00000395727 GVQW2A0A096LPI5 108 aaPredicted RBP3.91□□□□□ -1.78
PTPN20-208ENST00000395727 hDV102S1A0JD36 115 aa3.91□□□□□ -1.78
PTPN20-208ENST00000395727 HIGD1CA8MV81 97 aa3.91□□□□□ -1.78
PTPN20-208ENST00000395727 FGF6P10767 208 aa3.91□□□□□ -1.78
PTPN20-208ENST00000395727 AMMECR1LQ6DCA0 310 aa3.91□□□□□ -1.78
PTPN20-208ENST00000395727 CFAP161Q6P656 301 aa3.91□□□□□ -1.78
PTPN20-208ENST00000395727 OR5A1Q8NGJ0 315 aa3.91□□□□□ -1.78
PTPN20-208ENST00000395727 ISOC2Q96AB3 205 aa3.91□□□□□ -1.78
PTPN20-208ENST00000395727 PAM16Q9Y3D7 125 aa3.91□□□□□ -1.78
PTPN20-208ENST00000395727 CSDC2Q9Y534 153 aaKnown RBP3.91□□□□□ -1.78
PTPN20-208ENST00000395727 V9GYV3 84 aa3.91□□□□□ -1.78
PTPN20-208ENST00000395727 IGHV3-64A0A075B6Q5 118 aa3.9□□□□□ -1.79
PTPN20-208ENST00000395727 A0A1B0GW15 77 aa3.9□□□□□ -1.79
PTPN20-208ENST00000395727 CCL25O15444 150 aa3.9□□□□□ -1.79
PTPN20-208ENST00000395727 TSHBP01222 138 aa3.9□□□□□ -1.79
PTPN20-208ENST00000395727 RAB4AP20338 218 aa3.9□□□□□ -1.79
PTPN20-208ENST00000395727 RPL32P62910 135 aaKnown RBP3.9□□□□□ -1.79
PTPN20-208ENST00000395727 SPACA4Q8TDM5 124 aa3.9□□□□□ -1.79
PTPN20-208ENST00000395727 ST20Q9HBF5 79 aa3.9□□□□□ -1.79
PTPN20-208ENST00000395727 NAT8BQ9UHF3 227 aa3.9□□□□□ -1.79
PTPN20-208ENST00000395727 PKIGQ9Y2B9 76 aa3.9□□□□□ -1.79
PTPN20-208ENST00000395727 VPS13BQ7Z7G8 4022 aa3.9□□□□□ -1.79
PTPN20-208ENST00000395727 DNAH8Q96JB1 4490 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 TRBV24-1A0A075B6N3 115 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.89□□□□□ -1.79
PTPN20-208ENST00000395727 SMIM27A0A1W2PRY6 76 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 IGKV2-29A2NJV5 120 aaPredicted RBP3.89□□□□□ -1.79
PTPN20-208ENST00000395727 C7orf77A4D0Y5 90 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 LINC00862A6NCI5 91 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 PANO1I0J062 215 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 PPP1R2P9O14990 202 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 TCAPO15273 167 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 PMCHP20382 165 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 RPS10P46783 165 aaKnown RBP3.89□□□□□ -1.79
PTPN20-208ENST00000395727 CEBPGP53567 150 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 RPL37AP61513 92 aaKnown RBP3.89□□□□□ -1.79
PTPN20-208ENST00000395727 RPL23P62829 140 aaKnown RBP3.89□□□□□ -1.79
PTPN20-208ENST00000395727 SMAGPQ0VAQ4 97 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 RIGQ13278 110 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 TMEM241Q24JQ0 296 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 NUP35Q8NFH5 326 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 CHCHD10Q8WYQ3 142 aaPredicted RBP3.89□□□□□ -1.79
PTPN20-208ENST00000395727 TMEM101Q96IK0 257 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 BTF3L4Q96K17 158 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 TIMM21Q9BVV7 248 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 PLAC8Q9NZF1 115 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 NAT8Q9UHE5 227 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 MYCBP2O75592 4640 aa3.89□□□□□ -1.79
PTPN20-208ENST00000395727 FLG2Q5D862 2391 aaPredicted RBP3.88□□□□□ -1.79
PTPN20-208ENST00000395727 IGLV5-37A0A075B6J1 123 aa3.88□□□□□ -1.79
PTPN20-208ENST00000395727 LINC00959A0A1B0GUT2 108 aa3.88□□□□□ -1.79
PTPN20-208ENST00000395727 VCYO14598 125 aa3.88□□□□□ -1.79
PTPN20-208ENST00000395727 PHOX2AO14813 284 aa3.88□□□□□ -1.79
PTPN20-208ENST00000395727 GAS8-AS1O95177 125 aa3.88□□□□□ -1.79
PTPN20-208ENST00000395727 FAM104BQ5XKR9 115 aa3.88□□□□□ -1.79
PTPN20-208ENST00000395727 RNASEKQ6P5S7 137 aaKnown RBP3.88□□□□□ -1.79
PTPN20-208ENST00000395727 CD164L2Q6UWJ8 174 aa3.88□□□□□ -1.79
PTPN20-208ENST00000395727 AMN1Q8IY45 258 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms