RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 C10orf91Q5T1B1 145 aa8.7□□□□□ -1.02
HLA-DMA-202ENST00000395303 OR5A1Q8NGJ0 315 aa8.7□□□□□ -1.02
HLA-DMA-202ENST00000395303 BTF3L4Q96K17 158 aa8.7□□□□□ -1.02
HLA-DMA-202ENST00000395303 KIR2DL4Q99706 377 aa8.7□□□□□ -1.02
HLA-DMA-202ENST00000395303 SMIM2Q9BVW6 85 aa8.7□□□□□ -1.02
HLA-DMA-202ENST00000395303 CTDSP1Q9GZU7 261 aa8.7□□□□□ -1.02
HLA-DMA-202ENST00000395303 CSDC2Q9Y534 153 aaKnown RBP8.7□□□□□ -1.02
HLA-DMA-202ENST00000395303 PRSS47A8MTI9 375 aa8.69□□□□□ -1.02
HLA-DMA-202ENST00000395303 FCER1GP30273 86 aa8.69□□□□□ -1.02
HLA-DMA-202ENST00000395303 ORMDL3Q8N138 153 aa8.69□□□□□ -1.02
HLA-DMA-202ENST00000395303 CLRN3Q8NCR9 226 aa8.69□□□□□ -1.02
HLA-DMA-202ENST00000395303 TMEM101Q96IK0 257 aa8.69□□□□□ -1.02
HLA-DMA-202ENST00000395303 CDC42SE2Q9NRR3 84 aa8.69□□□□□ -1.02
HLA-DMA-202ENST00000395303 FAM30AQ9NZY2 134 aa8.69□□□□□ -1.02
HLA-DMA-202ENST00000395303 SRRM2Q9UQ35 2752 aaKnown RBP8.68□□□□□ -1.02
HLA-DMA-202ENST00000395303 TRAV9-1A0A075B6T8 112 aa8.68□□□□□ -1.02
HLA-DMA-202ENST00000395303 SMAGPQ0VAQ4 97 aa8.68□□□□□ -1.02
HLA-DMA-202ENST00000395303 DGAT2L7PQ6IED9 249 aa8.68□□□□□ -1.02
HLA-DMA-202ENST00000395303 TMEM136Q6ZRR5 245 aa8.68□□□□□ -1.02
HLA-DMA-202ENST00000395303 TIMM21Q9BVV7 248 aa8.68□□□□□ -1.02
HLA-DMA-202ENST00000395303 LAMTOR2Q9Y2Q5 125 aa8.68□□□□□ -1.02
HLA-DMA-202ENST00000395303 CARHSP1Q9Y2V2 147 aaKnown RBP8.68□□□□□ -1.02
HLA-DMA-202ENST00000395303 UBE2D4Q9Y2X8 147 aa8.68□□□□□ -1.02
HLA-DMA-202ENST00000395303 LINC00959A0A1B0GUT2 108 aa8.67□□□□□ -1.02
HLA-DMA-202ENST00000395303 CHCHD10Q8WYQ3 142 aaPredicted RBP8.67□□□□□ -1.02
HLA-DMA-202ENST00000395303 PRELID3AQ96N28 172 aa8.67□□□□□ -1.02
HLA-DMA-202ENST00000395303 GAGE12HA6NDE8 117 aa8.66□□□□□ -1.02
HLA-DMA-202ENST00000395303 EPM2AB3EWF7 344 aa8.66□□□□□ -1.02
HLA-DMA-202ENST00000395303 ZNF664Q8N3J9 261 aa8.66□□□□□ -1.02
HLA-DMA-202ENST00000395303 TMEM18Q96B42 140 aa8.66□□□□□ -1.02
HLA-DMA-202ENST00000395303 IGKV3OR2-268A0A0C4DH90 116 aa8.65□□□□□ -1.02
HLA-DMA-202ENST00000395303 CCL25O15444 150 aa8.65□□□□□ -1.02
HLA-DMA-202ENST00000395303 CNBPP62633 177 aaKnown RBP8.65□□□□□ -1.02
HLA-DMA-202ENST00000395303 LINC01620Q4KN68 170 aa8.65□□□□□ -1.02
HLA-DMA-202ENST00000395303 C15orf56Q8N910 161 aa8.65□□□□□ -1.02
HLA-DMA-202ENST00000395303 C9orf163Q8N9P6 203 aa8.65□□□□□ -1.02
HLA-DMA-202ENST00000395303 FOXI1Q12951 378 aa8.64□□□□□ -1.03
HLA-DMA-202ENST00000395303 CFAP161Q6P656 301 aa8.64□□□□□ -1.03
HLA-DMA-202ENST00000395303 FAM104AQ969W3 186 aa8.64□□□□□ -1.03
HLA-DMA-202ENST00000395303 DNAH8Q96JB1 4490 aa8.64□□□□□ -1.03
HLA-DMA-202ENST00000395303 SLPIP03973 132 aa8.63□□□□□ -1.03
HLA-DMA-202ENST00000395303 RPL39P62891 51 aaKnown RBP8.63□□□□□ -1.03
HLA-DMA-202ENST00000395303 SS18Q15532 418 aa8.63□□□□□ -1.03
HLA-DMA-202ENST00000395303 MRPS36P82909 103 aaKnown RBP8.62□□□□□ -1.03
HLA-DMA-202ENST00000395303 RHEBQ15382 184 aa8.62□□□□□ -1.03
HLA-DMA-202ENST00000395303 CD164L2Q6UWJ8 174 aa8.62□□□□□ -1.03
HLA-DMA-202ENST00000395303 Q8N8P6 123 aa8.62□□□□□ -1.03
HLA-DMA-202ENST00000395303 MAP1LC3AQ9H492 121 aa8.62□□□□□ -1.03
HLA-DMA-202ENST00000395303 SPANXA1Q9NS26 97 aa8.62□□□□□ -1.03
HLA-DMA-202ENST00000395303 FLG2Q5D862 2391 aaPredicted RBP8.62□□□□□ -1.03
HLA-DMA-202ENST00000395303 GVQW2A0A096LPI5 108 aaPredicted RBP8.61□□□□□ -1.03
HLA-DMA-202ENST00000395303 hDV102S1A0JD36 115 aa8.61□□□□□ -1.03
HLA-DMA-202ENST00000395303 INAFM2P0DMQ5 153 aa8.61□□□□□ -1.03
HLA-DMA-202ENST00000395303 HAMPP81172 84 aa8.61□□□□□ -1.03
HLA-DMA-202ENST00000395303 Q5VSD8 79 aa8.61□□□□□ -1.03
HLA-DMA-202ENST00000395303 Q6ZUT4 128 aa8.61□□□□□ -1.03
HLA-DMA-202ENST00000395303 AP5S1Q9NUS5 200 aa8.61□□□□□ -1.03
HLA-DMA-202ENST00000395303 C1orf196B1AJZ1 125 aa8.6□□□□□ -1.03
HLA-DMA-202ENST00000395303 K7EMI3 77 aa8.6□□□□□ -1.03
HLA-DMA-202ENST00000395303 RAB5AP20339 215 aa8.6□□□□□ -1.03
HLA-DMA-202ENST00000395303 S100PP25815 95 aa8.6□□□□□ -1.03
HLA-DMA-202ENST00000395303 XCL1P47992 114 aa8.6□□□□□ -1.03
HLA-DMA-202ENST00000395303 COX19Q49B96 90 aa8.6□□□□□ -1.03
HLA-DMA-202ENST00000395303 SDIM1Q6ZPB5 146 aa8.6□□□□□ -1.03
HLA-DMA-202ENST00000395303 CHAC1Q9BUX1 264 aa8.6□□□□□ -1.03
HLA-DMA-202ENST00000395303 PYGO1Q9Y3Y4 419 aa8.6□□□□□ -1.03
HLA-DMA-202ENST00000395303 SMR3BP02814 79 aaPredicted RBP8.59□□□□□ -1.03
HLA-DMA-202ENST00000395303 SCXQ7RTU7 201 aa8.59□□□□□ -1.03
HLA-DMA-202ENST00000395303 GNB1LQ9BYB4 327 aa8.59□□□□□ -1.03
HLA-DMA-202ENST00000395303 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.58□□□□□ -1.04
HLA-DMA-202ENST00000395303 IGHV1-58A0A0C4DH39 117 aa8.58□□□□□ -1.04
HLA-DMA-202ENST00000395303 LOC389332A0A1B0GUA5 103 aa8.58□□□□□ -1.04
HLA-DMA-202ENST00000395303 RNASE13Q5GAN3 156 aaKnown RBP8.58□□□□□ -1.04
HLA-DMA-202ENST00000395303 NXT2Q9NPJ8 142 aaKnown RBP8.58□□□□□ -1.04
HLA-DMA-202ENST00000395303 RPS10P5Q9NQ39 176 aa8.58□□□□□ -1.04
HLA-DMA-202ENST00000395303 CIRBPQ14011 172 aaKnown RBP8.57□□□□□ -1.04
HLA-DMA-202ENST00000395303 HIGD2BQ4VC39 106 aa8.57□□□□□ -1.04
HLA-DMA-202ENST00000395303 CIRBP-AS1Q8TBR5 109 aa8.57□□□□□ -1.04
HLA-DMA-202ENST00000395303 IGHV3-64A0A075B6Q5 118 aa8.56□□□□□ -1.04
HLA-DMA-202ENST00000395303 TRAV13-1A0A0B4J241 112 aa8.56□□□□□ -1.04
HLA-DMA-202ENST00000395303 MT-ND6P03923 174 aa8.56□□□□□ -1.04
HLA-DMA-202ENST00000395303 IFI27P40305 119 aaPredicted RBP8.56□□□□□ -1.04
HLA-DMA-202ENST00000395303 KIAA1644Q3SXP7 199 aa8.56□□□□□ -1.04
HLA-DMA-202ENST00000395303 ORMDL2Q53FV1 153 aa8.56□□□□□ -1.04
HLA-DMA-202ENST00000395303 OPRPNQ99935 248 aaPredicted RBP8.56□□□□□ -1.04
HLA-DMA-202ENST00000395303 IGLV4-3A0A075B6K6 122 aa8.55□□□□□ -1.04
HLA-DMA-202ENST00000395303 FAM229AH3BQW9 127 aa8.55□□□□□ -1.04
HLA-DMA-202ENST00000395303 SNAPINO95295 136 aa8.55□□□□□ -1.04
HLA-DMA-202ENST00000395303 APOC3P02656 99 aa8.55□□□□□ -1.04
HLA-DMA-202ENST00000395303 NPSP0C0P6 89 aa8.55□□□□□ -1.04
HLA-DMA-202ENST00000395303 C2orf66Q6UXQ4 117 aa8.55□□□□□ -1.04
HLA-DMA-202ENST00000395303 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.55□□□□□ -1.04
HLA-DMA-202ENST00000395303 IGHV3OR16-9A0A0B4J2B5 98 aa8.54□□□□□ -1.04
HLA-DMA-202ENST00000395303 LINC01546A6NGU7 62 aa8.54□□□□□ -1.04
HLA-DMA-202ENST00000395303 COX7A2LO14548 114 aa8.54□□□□□ -1.04
HLA-DMA-202ENST00000395303 NDUFA5Q16718 116 aa8.54□□□□□ -1.04
HLA-DMA-202ENST00000395303 SVBPQ8N300 66 aa8.54□□□□□ -1.04
HLA-DMA-202ENST00000395303 ALKBH7Q9BT30 221 aaPredicted RBP8.54□□□□□ -1.04
HLA-DMA-202ENST00000395303 CYSLTR1Q9Y271 337 aa8.54□□□□□ -1.04
HLA-DMA-202ENST00000395303 PANO1I0J062 215 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms