RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 LOC107984640A0A0U1RRK4 108 aa12.97□□□□□ -0.33
TRAF4-203ENST00000394925 A0A1W2PNN7 141 aa12.97□□□□□ -0.33
TRAF4-203ENST00000394925 K7EN84 100 aa12.97□□□□□ -0.33
TRAF4-203ENST00000394925 ESDP10768 282 aa12.97□□□□□ -0.33
TRAF4-203ENST00000394925 CAMPP49913 170 aa12.97□□□□□ -0.33
TRAF4-203ENST00000394925 TSHBP01222 138 aa12.96□□□□□ -0.33
TRAF4-203ENST00000394925 BCL2P10415 239 aa12.96□□□□□ -0.33
TRAF4-203ENST00000394925 OCC1Q8TAD7 63 aa12.96□□□□□ -0.33
TRAF4-203ENST00000394925 MRAP2Q96G30 205 aa12.96□□□□□ -0.33
TRAF4-203ENST00000394925 CDC42SE2Q9NRR3 84 aa12.96□□□□□ -0.33
TRAF4-203ENST00000394925 TMEM242Q9NWH2 141 aa12.96□□□□□ -0.33
TRAF4-203ENST00000394925 IGLV4-69A0A075B6H9 119 aa12.95□□□□□ -0.34
TRAF4-203ENST00000394925 TRBV6-5A0A0K0K1A5 114 aa12.95□□□□□ -0.34
TRAF4-203ENST00000394925 EIF5AL1Q6IS14 154 aaKnown RBP12.95□□□□□ -0.34
TRAF4-203ENST00000394925 ISOC2Q96AB3 205 aa12.95□□□□□ -0.34
TRAF4-203ENST00000394925 PSORS1C2Q9UIG4 136 aa12.95□□□□□ -0.34
TRAF4-203ENST00000394925 MT-ND6P03923 174 aa12.94□□□□□ -0.34
TRAF4-203ENST00000394925 MALP21145 153 aa12.93□□□□□ -0.34
TRAF4-203ENST00000394925 ZNF664Q8N3J9 261 aa12.93□□□□□ -0.34
TRAF4-203ENST00000394925 ST20Q9HBF5 79 aa12.93□□□□□ -0.34
TRAF4-203ENST00000394925 MRPL52Q86TS9 123 aaKnown RBP12.92□□□□□ -0.34
TRAF4-203ENST00000394925 NUP35Q8NFH5 326 aa12.92□□□□□ -0.34
TRAF4-203ENST00000394925 C9orf116Q5BN46 136 aaPredicted RBP12.91□□□□□ -0.34
TRAF4-203ENST00000394925 C1orf137Q5JT78 98 aa12.91□□□□□ -0.34
TRAF4-203ENST00000394925 CAMK2N2Q96S95 79 aa12.91□□□□□ -0.34
TRAF4-203ENST00000394925 GATCO43716 136 aaKnown RBP12.9□□□□□ -0.34
TRAF4-203ENST00000394925 APOMO95445 188 aa12.9□□□□□ -0.34
TRAF4-203ENST00000394925 COX7A2LO14548 114 aa12.89□□□□□ -0.35
TRAF4-203ENST00000394925 PHF5AQ7RTV0 110 aaKnown RBP12.89□□□□□ -0.35
TRAF4-203ENST00000394925 C7orf77A4D0Y5 90 aa12.88□□□□□ -0.35
TRAF4-203ENST00000394925 C1orf196B1AJZ1 125 aa12.88□□□□□ -0.35
TRAF4-203ENST00000394925 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.88□□□□□ -0.35
TRAF4-203ENST00000394925 POLR2KP53803 58 aaKnown RBP12.88□□□□□ -0.35
TRAF4-203ENST00000394925 RPL18AQ02543 176 aaKnown RBP12.88□□□□□ -0.35
TRAF4-203ENST00000394925 FAM210AQ96ND0 272 aa12.88□□□□□ -0.35
TRAF4-203ENST00000394925 A8MWL6 223 aa12.87□□□□□ -0.35
TRAF4-203ENST00000394925 PRR26Q8N8Z3 221 aa12.87□□□□□ -0.35
TRAF4-203ENST00000394925 TRBV27A0A0K0K1C4 114 aa12.86□□□□□ -0.35
TRAF4-203ENST00000394925 TAGLN2P37802 199 aaKnown RBP12.86□□□□□ -0.35
TRAF4-203ENST00000394925 RNASE13Q5GAN3 156 aaKnown RBP12.86□□□□□ -0.35
TRAF4-203ENST00000394925 OPRPNQ99935 248 aaPredicted RBP12.86□□□□□ -0.35
TRAF4-203ENST00000394925 BORCS7Q96B45 105 aa12.85□□□□□ -0.35
TRAF4-203ENST00000394925 C2orf48Q96LS8 159 aa12.85□□□□□ -0.35
TRAF4-203ENST00000394925 TRAV13-1A0A0B4J241 112 aa12.84□□□□□ -0.35
TRAF4-203ENST00000394925 C5orf38Q86SI9 138 aa12.84□□□□□ -0.35
TRAF4-203ENST00000394925 FCER1GP30273 86 aa12.83□□□□□ -0.36
TRAF4-203ENST00000394925 FAM231DQ6ZW35 169 aa12.83□□□□□ -0.36
TRAF4-203ENST00000394925 DIRC1Q969H9 104 aa12.83□□□□□ -0.36
TRAF4-203ENST00000394925 TMEM191AQ9H0A3 160 aa12.83□□□□□ -0.36
TRAF4-203ENST00000394925 IGLV7-43P04211 117 aa12.82□□□□□ -0.36
TRAF4-203ENST00000394925 RAB4AP20338 218 aa12.82□□□□□ -0.36
TRAF4-203ENST00000394925 SPAG11BQ08648 103 aa12.81□□□□□ -0.36
TRAF4-203ENST00000394925 AMN1Q8IY45 258 aa12.81□□□□□ -0.36
TRAF4-203ENST00000394925 UBE2D4Q9Y2X8 147 aa12.81□□□□□ -0.36
TRAF4-203ENST00000394925 CSDC2Q9Y534 153 aaKnown RBP12.81□□□□□ -0.36
TRAF4-203ENST00000394925 A0A1B0GUT8 65 aa12.8□□□□□ -0.36
TRAF4-203ENST00000394925 SMKR1H3BMG3 65 aa12.8□□□□□ -0.36
TRAF4-203ENST00000394925 VCYO14598 125 aa12.8□□□□□ -0.36
TRAF4-203ENST00000394925 CT83Q5H943 113 aa12.8□□□□□ -0.36
TRAF4-203ENST00000394925 A0A087WZ39 114 aa12.79□□□□□ -0.36
TRAF4-203ENST00000394925 HIGD1CA8MV81 97 aa12.79□□□□□ -0.36
TRAF4-203ENST00000394925 SMAGPQ0VAQ4 97 aa12.79□□□□□ -0.36
TRAF4-203ENST00000394925 RNF151Q2KHN1 245 aa12.79□□□□□ -0.36
TRAF4-203ENST00000394925 H0Y9J4 135 aa12.78□□□□□ -0.36
TRAF4-203ENST00000394925 TMEM250H0YL14 139 aa12.78□□□□□ -0.36
TRAF4-203ENST00000394925 CEBPGP53567 150 aa12.78□□□□□ -0.36
TRAF4-203ENST00000394925 Q6ZUT4 128 aa12.78□□□□□ -0.36
TRAF4-203ENST00000394925 SLC51BQ86UW2 128 aa12.77□□□□□ -0.37
TRAF4-203ENST00000394925 KRTAP11-1Q8IUC1 163 aa12.77□□□□□ -0.37
TRAF4-203ENST00000394925 MUC2Q02817 5179 aa12.77□□□□□ -0.37
TRAF4-203ENST00000394925 FAM168BA1KXE4 195 aa12.76□□□□□ -0.37
TRAF4-203ENST00000394925 TSKUQ8WUA8 353 aa12.76□□□□□ -0.37
TRAF4-203ENST00000394925 SUMO2P61956 95 aaKnown RBP12.75□□□□□ -0.37
TRAF4-203ENST00000394925 OR10D4PQ8NGN7 298 aa12.75□□□□□ -0.37
TRAF4-203ENST00000394925 KIR2DL4Q99706 377 aa12.75□□□□□ -0.37
TRAF4-203ENST00000394925 MRPL35Q9NZE8 188 aaKnown RBP12.75□□□□□ -0.37
TRAF4-203ENST00000394925 NRACQ8N912 160 aa12.74□□□□□ -0.37
TRAF4-203ENST00000394925 ORAOV1Q8WV07 137 aa12.74□□□□□ -0.37
TRAF4-203ENST00000394925 IMMP2LQ96T52 175 aa12.74□□□□□ -0.37
TRAF4-203ENST00000394925 IGLV1-50A0A075B6I6 118 aa12.73□□□□□ -0.37
TRAF4-203ENST00000394925 PRR4Q16378 134 aa12.73□□□□□ -0.37
TRAF4-203ENST00000394925 FAM19A5Q7Z5A7 132 aaPredicted RBP12.73□□□□□ -0.37
TRAF4-203ENST00000394925 PPP1R17O96001 155 aa12.72□□□□□ -0.37
TRAF4-203ENST00000394925 C10orf25Q5T742 122 aa12.72□□□□□ -0.37
TRAF4-203ENST00000394925 TMEM18Q96B42 140 aa12.72□□□□□ -0.37
TRAF4-203ENST00000394925 TIMM21Q9BVV7 248 aa12.72□□□□□ -0.37
TRAF4-203ENST00000394925 NDUFA1O15239 70 aa12.71□□□□□ -0.37
TRAF4-203ENST00000394925 KRTAP1-4P0C5Y4 121 aa12.71□□□□□ -0.37
TRAF4-203ENST00000394925 RIGQ13278 110 aa12.71□□□□□ -0.37
TRAF4-203ENST00000394925 F8WDY8 70 aa12.7□□□□□ -0.38
TRAF4-203ENST00000394925 GAGE2EQ4V326 116 aa12.7□□□□□ -0.38
TRAF4-203ENST00000394925 UNQ6190/PRO20217Q6UXQ8 127 aa12.7□□□□□ -0.38
TRAF4-203ENST00000394925 LINC01551Q86U37 167 aa12.7□□□□□ -0.38
TRAF4-203ENST00000394925 GAGE2DQ9UEU5 116 aa12.7□□□□□ -0.38
TRAF4-203ENST00000394925 PPP1R2P9O14990 202 aa12.69□□□□□ -0.38
TRAF4-203ENST00000394925 SMIM7Q9BQ49 75 aa12.69□□□□□ -0.38
TRAF4-203ENST00000394925 OSTCQ9NRP0 149 aa12.69□□□□□ -0.38
TRAF4-203ENST00000394925 IGHV3OR16-9A0A0B4J2B5 98 aa12.68□□□□□ -0.38
TRAF4-203ENST00000394925 TLX1NBP0CAT3 122 aa12.68□□□□□ -0.38
TRAF4-203ENST00000394925 UBE2D1P51668 147 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms