RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 MAJINQ3KP22 176 aa10.46□□□□□ -0.74
PTPRK-208ENST00000392449 AMN1Q8IY45 258 aa10.46□□□□□ -0.74
PTPRK-208ENST00000392449 OR5A1Q8NGJ0 315 aa10.46□□□□□ -0.74
PTPRK-208ENST00000392449 TSKUQ8WUA8 353 aa10.46□□□□□ -0.74
PTPRK-208ENST00000392449 BORCS7Q96B45 105 aa10.46□□□□□ -0.74
PTPRK-208ENST00000392449 ST20Q9HBF5 79 aa10.46□□□□□ -0.74
PTPRK-208ENST00000392449 PLA2G2DQ9UNK4 145 aa10.46□□□□□ -0.74
PTPRK-208ENST00000392449 LINC00959A0A1B0GUT2 108 aa10.45□□□□□ -0.74
PTPRK-208ENST00000392449 A0A1B0GUT8 65 aa10.45□□□□□ -0.74
PTPRK-208ENST00000392449 NDUFS6O75380 124 aaKnown RBP10.45□□□□□ -0.74
PTPRK-208ENST00000392449 A0A096LNI7 61 aa10.44□□□□□ -0.74
PTPRK-208ENST00000392449 ZNF727A8MUV8 499 aa10.44□□□□□ -0.74
PTPRK-208ENST00000392449 SRP19P09132 144 aaKnown RBP10.44□□□□□ -0.74
PTPRK-208ENST00000392449 ZNF25P17030 456 aaPredicted RBP10.44□□□□□ -0.74
PTPRK-208ENST00000392449 RAB4AP20338 218 aa10.44□□□□□ -0.74
PTPRK-208ENST00000392449 MRAP2Q96G30 205 aa10.44□□□□□ -0.74
PTPRK-208ENST00000392449 TMEM101Q96IK0 257 aa10.44□□□□□ -0.74
PTPRK-208ENST00000392449 BTF3L4Q96K17 158 aa10.44□□□□□ -0.74
PTPRK-208ENST00000392449 FAM210AQ96ND0 272 aa10.44□□□□□ -0.74
PTPRK-208ENST00000392449 TMEM191AQ9H0A3 160 aa10.44□□□□□ -0.74
PTPRK-208ENST00000392449 POLR2KP53803 58 aaKnown RBP10.43□□□□□ -0.74
PTPRK-208ENST00000392449 STPG4Q8N801 248 aa10.43□□□□□ -0.74
PTPRK-208ENST00000392449 Q6ZRU5 148 aa10.42□□□□□ -0.74
PTPRK-208ENST00000392449 OSTCQ9NRP0 149 aa10.42□□□□□ -0.74
PTPRK-208ENST00000392449 V9GYV3 84 aa10.42□□□□□ -0.74
PTPRK-208ENST00000392449 CDC42SE2Q9NRR3 84 aa10.42□□□□□ -0.74
PTPRK-208ENST00000392449 TRBV27A0A0K0K1C4 114 aa10.41□□□□□ -0.74
PTPRK-208ENST00000392449 RNASE13Q5GAN3 156 aaKnown RBP10.41□□□□□ -0.74
PTPRK-208ENST00000392449 NUP35Q8NFH5 326 aa10.41□□□□□ -0.74
PTPRK-208ENST00000392449 C7orf33Q8WU49 177 aa10.41□□□□□ -0.74
PTPRK-208ENST00000392449 C7orf77A4D0Y5 90 aa10.4□□□□□ -0.74
PTPRK-208ENST00000392449 MRPL52Q86TS9 123 aaKnown RBP10.4□□□□□ -0.74
PTPRK-208ENST00000392449 ZNF664Q8N3J9 261 aa10.4□□□□□ -0.74
PTPRK-208ENST00000392449 TNXBP22105 4242 aa10.39□□□□□ -0.75
PTPRK-208ENST00000392449 IGHV1-58A0A0C4DH39 117 aa10.39□□□□□ -0.75
PTPRK-208ENST00000392449 C9JQL5 133 aa10.39□□□□□ -0.75
PTPRK-208ENST00000392449 NRACQ8N912 160 aa10.39□□□□□ -0.75
PTPRK-208ENST00000392449 ISOC2Q96AB3 205 aa10.39□□□□□ -0.75
PTPRK-208ENST00000392449 A0A1B0GVG6 124 aa10.38□□□□□ -0.75
PTPRK-208ENST00000392449 PRR3P79522 188 aaKnown RBP10.38□□□□□ -0.75
PTPRK-208ENST00000392449 SS18Q15532 418 aa10.38□□□□□ -0.75
PTPRK-208ENST00000392449 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
PTPRK-208ENST00000392449 FCER1GP30273 86 aa10.37□□□□□ -0.75
PTPRK-208ENST00000392449 RPL23P62829 140 aaKnown RBP10.37□□□□□ -0.75
PTPRK-208ENST00000392449 RIGQ13278 110 aa10.37□□□□□ -0.75
PTPRK-208ENST00000392449 ODF1Q14990 250 aa10.37□□□□□ -0.75
PTPRK-208ENST00000392449 CD164L2Q6UWJ8 174 aa10.37□□□□□ -0.75
PTPRK-208ENST00000392449 VCYO14598 125 aa10.36□□□□□ -0.75
PTPRK-208ENST00000392449 SUMO2P61956 95 aaKnown RBP10.36□□□□□ -0.75
PTPRK-208ENST00000392449 SRSF3P84103 164 aaKnown RBP10.36□□□□□ -0.75
PTPRK-208ENST00000392449 SYCNQ0VAF6 134 aa10.36□□□□□ -0.75
PTPRK-208ENST00000392449 ADIRFQ15847 76 aa10.36□□□□□ -0.75
PTPRK-208ENST00000392449 TMEM241Q24JQ0 296 aa10.36□□□□□ -0.75
PTPRK-208ENST00000392449 MRPL51Q4U2R6 128 aaKnown RBP10.36□□□□□ -0.75
PTPRK-208ENST00000392449 UBE2D4Q9Y2X8 147 aa10.36□□□□□ -0.75
PTPRK-208ENST00000392449 ZNF561-AS1K7EIQ3 104 aa10.35□□□□□ -0.75
PTPRK-208ENST00000392449 Q6ZUT4 128 aa10.35□□□□□ -0.75
PTPRK-208ENST00000392449 NAT8BQ9UHF3 227 aa10.35□□□□□ -0.75
PTPRK-208ENST00000392449 IGLV4-69A0A075B6H9 119 aa10.34□□□□□ -0.75
PTPRK-208ENST00000392449 TRAV13-1A0A0B4J241 112 aa10.34□□□□□ -0.75
PTPRK-208ENST00000392449 CAMPP49913 170 aa10.34□□□□□ -0.75
PTPRK-208ENST00000392449 FAM104BQ5XKR9 115 aa10.33□□□□□ -0.76
PTPRK-208ENST00000392449 MALP21145 153 aa10.32□□□□□ -0.76
PTPRK-208ENST00000392449 FAM74A3Q4VXF1 159 aa10.32□□□□□ -0.76
PTPRK-208ENST00000392449 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
PTPRK-208ENST00000392449 KIR2DL4Q99706 377 aa10.32□□□□□ -0.76
PTPRK-208ENST00000392449 SMIM27A0A1W2PRY6 76 aa10.31□□□□□ -0.76
PTPRK-208ENST00000392449 C1orf196B1AJZ1 125 aa10.31□□□□□ -0.76
PTPRK-208ENST00000392449 COX7A2LO14548 114 aa10.31□□□□□ -0.76
PTPRK-208ENST00000392449 RPL39P62891 51 aaKnown RBP10.31□□□□□ -0.76
PTPRK-208ENST00000392449 GAGE2BQ13066 116 aa10.31□□□□□ -0.76
PTPRK-208ENST00000392449 LINC00474Q9P2X8 69 aa10.31□□□□□ -0.76
PTPRK-208ENST00000392449 NAT8Q9UHE5 227 aa10.31□□□□□ -0.76
PTPRK-208ENST00000392449 PTTG1IPP53801 180 aa10.3□□□□□ -0.76
PTPRK-208ENST00000392449 CSDC2Q9Y534 153 aaKnown RBP10.3□□□□□ -0.76
PTPRK-208ENST00000392449 PPP1R17O96001 155 aa10.3□□□□□ -0.76
PTPRK-208ENST00000392449 MRPL54Q6P161 138 aaKnown RBP10.3□□□□□ -0.76
PTPRK-208ENST00000392449 FAM104AQ969W3 186 aa10.3□□□□□ -0.76
PTPRK-208ENST00000392449 PPP1R2P9O14990 202 aa10.29□□□□□ -0.76
PTPRK-208ENST00000392449 CKS2P33552 79 aa10.29□□□□□ -0.76
PTPRK-208ENST00000392449 LINC01600Q96MT4 127 aa10.29□□□□□ -0.76
PTPRK-208ENST00000392449 CAMK2N2Q96S95 79 aa10.29□□□□□ -0.76
PTPRK-208ENST00000392449 OPRPNQ99935 248 aaPredicted RBP10.29□□□□□ -0.76
PTPRK-208ENST00000392449 A0A0J9YXV3 536 aa10.28□□□□□ -0.76
PTPRK-208ENST00000392449 LOC107984640A0A0U1RRK4 108 aa10.28□□□□□ -0.76
PTPRK-208ENST00000392449 A0A1W2PNN7 141 aa10.28□□□□□ -0.76
PTPRK-208ENST00000392449 TNFRSF6BO95407 300 aa10.28□□□□□ -0.76
PTPRK-208ENST00000392449 D6R8Y8 96 aa10.27□□□□□ -0.77
PTPRK-208ENST00000392449 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.27□□□□□ -0.77
PTPRK-208ENST00000392449 C20orf78Q9BR46 151 aa10.27□□□□□ -0.77
PTPRK-208ENST00000392449 PKIGQ9Y2B9 76 aa10.27□□□□□ -0.77
PTPRK-208ENST00000392449 TRBV24-1A0A075B6N3 115 aa10.26□□□□□ -0.77
PTPRK-208ENST00000392449 TCAPO15273 167 aa10.26□□□□□ -0.77
PTPRK-208ENST00000392449 APOMO95445 188 aa10.26□□□□□ -0.77
PTPRK-208ENST00000392449 NPYP01303 97 aa10.26□□□□□ -0.77
PTPRK-208ENST00000392449 SPAG11BQ08648 103 aa10.26□□□□□ -0.77
PTPRK-208ENST00000392449 TIMM21Q9BVV7 248 aa10.26□□□□□ -0.77
PTPRK-208ENST00000392449 SMIM2Q9BVW6 85 aa10.26□□□□□ -0.77
PTPRK-208ENST00000392449 LINC00862A6NCI5 91 aa10.25□□□□□ -0.77
PTPRK-208ENST00000392449 A6NJY4 79 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms