RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 ESDP10768 282 aa6.73□□□□□ -1.33
TRAV4-201ENST00000390426 hCG_2014768A0A024R1R8 64 aa6.72□□□□□ -1.33
TRAV4-201ENST00000390426 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
TRAV4-201ENST00000390426 A6NJY4 79 aa6.72□□□□□ -1.33
TRAV4-201ENST00000390426 CT83Q5H943 113 aa6.72□□□□□ -1.33
TRAV4-201ENST00000390426 AKAP14Q86UN6 197 aa6.72□□□□□ -1.33
TRAV4-201ENST00000390426 MRAP2Q96G30 205 aa6.72□□□□□ -1.33
TRAV4-201ENST00000390426 EIF5A2Q9GZV4 153 aaKnown RBP6.72□□□□□ -1.33
TRAV4-201ENST00000390426 TMEM191AQ9H0A3 160 aa6.72□□□□□ -1.33
TRAV4-201ENST00000390426 PKHD1L1Q86WI1 4243 aa6.71□□□□□ -1.34
TRAV4-201ENST00000390426 FAT3Q8TDW7 4589 aa6.71□□□□□ -1.34
TRAV4-201ENST00000390426 IGHV1-58A0A0C4DH39 117 aa6.71□□□□□ -1.34
TRAV4-201ENST00000390426 HIGD1CA8MV81 97 aa6.71□□□□□ -1.34
TRAV4-201ENST00000390426 SMKR1H3BMG3 65 aa6.71□□□□□ -1.34
TRAV4-201ENST00000390426 RAB4AP20338 218 aa6.71□□□□□ -1.34
TRAV4-201ENST00000390426 POLR2KP53803 58 aaKnown RBP6.71□□□□□ -1.34
TRAV4-201ENST00000390426 SS18Q15532 418 aa6.71□□□□□ -1.34
TRAV4-201ENST00000390426 LINC01551Q86U37 167 aa6.71□□□□□ -1.34
TRAV4-201ENST00000390426 AMN1Q8IY45 258 aa6.71□□□□□ -1.34
TRAV4-201ENST00000390426 TSKUQ8WUA8 353 aa6.71□□□□□ -1.34
TRAV4-201ENST00000390426 SMIM7Q9BQ49 75 aa6.71□□□□□ -1.34
TRAV4-201ENST00000390426 CDC42SE2Q9NRR3 84 aa6.71□□□□□ -1.34
TRAV4-201ENST00000390426 ZNF727A8MUV8 499 aa6.7□□□□□ -1.34
TRAV4-201ENST00000390426 PRR3P79522 188 aaKnown RBP6.7□□□□□ -1.34
TRAV4-201ENST00000390426 MRPL52Q86TS9 123 aaKnown RBP6.7□□□□□ -1.34
TRAV4-201ENST00000390426 ZNF664Q8N3J9 261 aa6.7□□□□□ -1.34
TRAV4-201ENST00000390426 CARD19Q96LW7 228 aa6.7□□□□□ -1.34
TRAV4-201ENST00000390426 OSTCQ9NRP0 149 aa6.7□□□□□ -1.34
TRAV4-201ENST00000390426 HMCN2Q8NDA2 5059 aa6.69□□□□□ -1.34
TRAV4-201ENST00000390426 TRBV27A0A0K0K1C4 114 aa6.69□□□□□ -1.34
TRAV4-201ENST00000390426 C7orf77A4D0Y5 90 aa6.69□□□□□ -1.34
TRAV4-201ENST00000390426 ZNF561-AS1K7EIQ3 104 aa6.69□□□□□ -1.34
TRAV4-201ENST00000390426 SRP19P09132 144 aaKnown RBP6.69□□□□□ -1.34
TRAV4-201ENST00000390426 FCER1GP30273 86 aa6.69□□□□□ -1.34
TRAV4-201ENST00000390426 SYCNQ0VAF6 134 aa6.69□□□□□ -1.34
TRAV4-201ENST00000390426 CD164L2Q6UWJ8 174 aa6.69□□□□□ -1.34
TRAV4-201ENST00000390426 VCYO14598 125 aa6.68□□□□□ -1.34
TRAV4-201ENST00000390426 RIGQ13278 110 aa6.68□□□□□ -1.34
TRAV4-201ENST00000390426 RNASE13Q5GAN3 156 aaKnown RBP6.68□□□□□ -1.34
TRAV4-201ENST00000390426 FAM210AQ96ND0 272 aa6.68□□□□□ -1.34
TRAV4-201ENST00000390426 LINC00474Q9P2X8 69 aa6.68□□□□□ -1.34
TRAV4-201ENST00000390426 V9GYV3 84 aa6.68□□□□□ -1.34
TRAV4-201ENST00000390426 CAMPP49913 170 aa6.67□□□□□ -1.34
TRAV4-201ENST00000390426 NRACQ8N912 160 aa6.67□□□□□ -1.34
TRAV4-201ENST00000390426 NUP35Q8NFH5 326 aa6.67□□□□□ -1.34
TRAV4-201ENST00000390426 LINC01600Q96MT4 127 aa6.67□□□□□ -1.34
TRAV4-201ENST00000390426 PKIGQ9Y2B9 76 aa6.67□□□□□ -1.34
TRAV4-201ENST00000390426 IGLV4-69A0A075B6H9 119 aa6.66□□□□□ -1.34
TRAV4-201ENST00000390426 TRAV13-1A0A0B4J241 112 aa6.66□□□□□ -1.34
TRAV4-201ENST00000390426 C1orf196B1AJZ1 125 aa6.66□□□□□ -1.34
TRAV4-201ENST00000390426 MALP21145 153 aa6.66□□□□□ -1.34
TRAV4-201ENST00000390426 SUMO2P61956 95 aaKnown RBP6.66□□□□□ -1.34
TRAV4-201ENST00000390426 GAGE2BQ13066 116 aa6.66□□□□□ -1.34
TRAV4-201ENST00000390426 ODF1Q14990 250 aa6.66□□□□□ -1.34
TRAV4-201ENST00000390426 TMEM241Q24JQ0 296 aa6.66□□□□□ -1.34
TRAV4-201ENST00000390426 ISOC2Q96AB3 205 aa6.66□□□□□ -1.34
TRAV4-201ENST00000390426 UBE2D4Q9Y2X8 147 aa6.66□□□□□ -1.34
TRAV4-201ENST00000390426 LOC107984640A0A0U1RRK4 108 aa6.65□□□□□ -1.34
TRAV4-201ENST00000390426 COX7A2LO14548 114 aa6.65□□□□□ -1.34
TRAV4-201ENST00000390426 PPP1R17O96001 155 aa6.65□□□□□ -1.34
TRAV4-201ENST00000390426 PTTG1IPP53801 180 aa6.65□□□□□ -1.34
TRAV4-201ENST00000390426 RPL23P62829 140 aaKnown RBP6.65□□□□□ -1.34
TRAV4-201ENST00000390426 MRPL51Q4U2R6 128 aaKnown RBP6.65□□□□□ -1.34
TRAV4-201ENST00000390426 C5orf38Q86SI9 138 aa6.65□□□□□ -1.34
TRAV4-201ENST00000390426 KIR2DL4Q99706 377 aa6.65□□□□□ -1.34
TRAV4-201ENST00000390426 A0A1W2PNN7 141 aa6.64□□□□□ -1.35
TRAV4-201ENST00000390426 SMAGPQ0VAQ4 97 aa6.64□□□□□ -1.35
TRAV4-201ENST00000390426 ADIRFQ15847 76 aa6.64□□□□□ -1.35
TRAV4-201ENST00000390426 FAM104BQ5XKR9 115 aa6.64□□□□□ -1.35
TRAV4-201ENST00000390426 SPINK6Q6UWN8 80 aa6.64□□□□□ -1.35
TRAV4-201ENST00000390426 Q6ZRP5 223 aa6.64□□□□□ -1.35
TRAV4-201ENST00000390426 Q6ZUT4 128 aa6.64□□□□□ -1.35
TRAV4-201ENST00000390426 CAMK2N2Q96S95 79 aa6.64□□□□□ -1.35
TRAV4-201ENST00000390426 NAT8BQ9UHF3 227 aa6.64□□□□□ -1.35
TRAV4-201ENST00000390426 CSDC2Q9Y534 153 aaKnown RBP6.64□□□□□ -1.35
TRAV4-201ENST00000390426 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
TRAV4-201ENST00000390426 A0A0J9YXV3 536 aa6.63□□□□□ -1.35
TRAV4-201ENST00000390426 C9JQL5 133 aa6.63□□□□□ -1.35
TRAV4-201ENST00000390426 PPP1R2P9O14990 202 aa6.63□□□□□ -1.35
TRAV4-201ENST00000390426 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
TRAV4-201ENST00000390426 SRSF9Q13242 221 aaKnown RBP eCLIP6.63□□□□□ -1.35
TRAV4-201ENST00000390426 FAM74A3Q4VXF1 159 aa6.63□□□□□ -1.35
TRAV4-201ENST00000390426 REG3GQ6UW15 175 aa6.63□□□□□ -1.35
TRAV4-201ENST00000390426 CKS2P33552 79 aa6.62□□□□□ -1.35
TRAV4-201ENST00000390426 RPL39P62891 51 aaKnown RBP6.62□□□□□ -1.35
TRAV4-201ENST00000390426 TMEM18Q96B42 140 aa6.62□□□□□ -1.35
TRAV4-201ENST00000390426 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
TRAV4-201ENST00000390426 TIMM21Q9BVV7 248 aa6.62□□□□□ -1.35
TRAV4-201ENST00000390426 SMIM27A0A1W2PRY6 76 aa6.61□□□□□ -1.35
TRAV4-201ENST00000390426 LINC00862A6NCI5 91 aa6.61□□□□□ -1.35
TRAV4-201ENST00000390426 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.61□□□□□ -1.35
TRAV4-201ENST00000390426 APOMO95445 188 aa6.61□□□□□ -1.35
TRAV4-201ENST00000390426 SRSF3P84103 164 aaKnown RBP6.61□□□□□ -1.35
TRAV4-201ENST00000390426 RPL18AQ02543 176 aaKnown RBP6.61□□□□□ -1.35
TRAV4-201ENST00000390426 SPAG11BQ08648 103 aa6.61□□□□□ -1.35
TRAV4-201ENST00000390426 C9orf116Q5BN46 136 aaPredicted RBP6.61□□□□□ -1.35
TRAV4-201ENST00000390426 C2orf48Q96LS8 159 aa6.61□□□□□ -1.35
TRAV4-201ENST00000390426 C20orf78Q9BR46 151 aa6.61□□□□□ -1.35
TRAV4-201ENST00000390426 NAT8Q9UHE5 227 aa6.61□□□□□ -1.35
TRAV4-201ENST00000390426 TNFRSF6BO95407 300 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms