RNA–Protein interactions for RNA: ENST00000390425.2

TRAV3-201, Transcript of T cell receptor alpha variable 3 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV3, Length 519 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3-201ENST00000390425 MRAP2Q96G30 205 aa6.86□□□□□ -1.31
TRAV3-201ENST00000390425 BTF3L4Q96K17 158 aa6.86□□□□□ -1.31
TRAV3-201ENST00000390425 TMEM191AQ9H0A3 160 aa6.86□□□□□ -1.31
TRAV3-201ENST00000390425 ST20Q9HBF5 79 aa6.86□□□□□ -1.31
TRAV3-201ENST00000390425 CDC42SE2Q9NRR3 84 aa6.86□□□□□ -1.31
TRAV3-201ENST00000390425 RNF213Q63HN8 5207 aa6.86□□□□□ -1.31
TRAV3-201ENST00000390425 TRBV27A0A0K0K1C4 114 aa6.85□□□□□ -1.31
TRAV3-201ENST00000390425 A0A1B0GUT8 65 aa6.85□□□□□ -1.31
TRAV3-201ENST00000390425 HIGD1CA8MV81 97 aa6.85□□□□□ -1.31
TRAV3-201ENST00000390425 RAB4AP20338 218 aa6.85□□□□□ -1.31
TRAV3-201ENST00000390425 CEBPGP53567 150 aa6.85□□□□□ -1.31
TRAV3-201ENST00000390425 CD164L2Q6UWJ8 174 aa6.85□□□□□ -1.31
TRAV3-201ENST00000390425 LINC01551Q86U37 167 aa6.85□□□□□ -1.31
TRAV3-201ENST00000390425 AMN1Q8IY45 258 aa6.85□□□□□ -1.31
TRAV3-201ENST00000390425 TMEM101Q96IK0 257 aa6.85□□□□□ -1.31
TRAV3-201ENST00000390425 A0A0J9YXV3 536 aa6.84□□□□□ -1.31
TRAV3-201ENST00000390425 C7orf77A4D0Y5 90 aa6.84□□□□□ -1.31
TRAV3-201ENST00000390425 SMKR1H3BMG3 65 aa6.84□□□□□ -1.31
TRAV3-201ENST00000390425 TSKUQ8WUA8 353 aa6.84□□□□□ -1.31
TRAV3-201ENST00000390425 KRTAP10-8P60410 259 aa6.83□□□□□ -1.32
TRAV3-201ENST00000390425 BLOC1S1P78537 153 aa6.83□□□□□ -1.32
TRAV3-201ENST00000390425 SYCNQ0VAF6 134 aa6.83□□□□□ -1.32
TRAV3-201ENST00000390425 SRSF9Q13242 221 aaKnown RBP eCLIP6.83□□□□□ -1.32
TRAV3-201ENST00000390425 SS18Q15532 418 aa6.83□□□□□ -1.32
TRAV3-201ENST00000390425 ZNF664Q8N3J9 261 aa6.83□□□□□ -1.32
TRAV3-201ENST00000390425 NRACQ8N912 160 aa6.83□□□□□ -1.32
TRAV3-201ENST00000390425 SMIM7Q9BQ49 75 aa6.83□□□□□ -1.32
TRAV3-201ENST00000390425 OSTCQ9NRP0 149 aa6.83□□□□□ -1.32
TRAV3-201ENST00000390425 LINC00474Q9P2X8 69 aa6.83□□□□□ -1.32
TRAV3-201ENST00000390425 LPAP08519 4548 aa6.83□□□□□ -1.32
TRAV3-201ENST00000390425 IGLV4-69A0A075B6H9 119 aa6.82□□□□□ -1.32
TRAV3-201ENST00000390425 CAMPP49913 170 aa6.82□□□□□ -1.32
TRAV3-201ENST00000390425 PTTG1IPP53801 180 aa6.82□□□□□ -1.32
TRAV3-201ENST00000390425 RNASE13Q5GAN3 156 aaKnown RBP6.82□□□□□ -1.32
TRAV3-201ENST00000390425 SPINK6Q6UWN8 80 aa6.82□□□□□ -1.32
TRAV3-201ENST00000390425 BORCS7Q96B45 105 aa6.82□□□□□ -1.32
TRAV3-201ENST00000390425 FAM210AQ96ND0 272 aa6.82□□□□□ -1.32
TRAV3-201ENST00000390425 UBE2D4Q9Y2X8 147 aa6.82□□□□□ -1.32
TRAV3-201ENST00000390425 V9GYV3 84 aa6.82□□□□□ -1.32
TRAV3-201ENST00000390425 A0A1W2PNN7 141 aa6.81□□□□□ -1.32
TRAV3-201ENST00000390425 ZNF561-AS1K7EIQ3 104 aa6.81□□□□□ -1.32
TRAV3-201ENST00000390425 SRP19P09132 144 aaKnown RBP6.81□□□□□ -1.32
TRAV3-201ENST00000390425 Q6ZUT4 128 aa6.81□□□□□ -1.32
TRAV3-201ENST00000390425 NUP35Q8NFH5 326 aa6.81□□□□□ -1.32
TRAV3-201ENST00000390425 PKIGQ9Y2B9 76 aa6.81□□□□□ -1.32
TRAV3-201ENST00000390425 ZNF727A8MUV8 499 aa6.8□□□□□ -1.32
TRAV3-201ENST00000390425 SUMO2P61956 95 aaKnown RBP6.8□□□□□ -1.32
TRAV3-201ENST00000390425 GAGE2BQ13066 116 aa6.8□□□□□ -1.32
TRAV3-201ENST00000390425 Q6ZRP5 223 aa6.8□□□□□ -1.32
TRAV3-201ENST00000390425 AKAP14Q86UN6 197 aa6.8□□□□□ -1.32
TRAV3-201ENST00000390425 FAM104AQ969W3 186 aa6.8□□□□□ -1.32
TRAV3-201ENST00000390425 CSDC2Q9Y534 153 aaKnown RBP6.8□□□□□ -1.32
TRAV3-201ENST00000390425 LOC107984640A0A0U1RRK4 108 aa6.79□□□□□ -1.32
TRAV3-201ENST00000390425 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.79□□□□□ -1.32
TRAV3-201ENST00000390425 COX7A2LO14548 114 aa6.79□□□□□ -1.32
TRAV3-201ENST00000390425 VCYO14598 125 aa6.79□□□□□ -1.32
TRAV3-201ENST00000390425 REG3GQ6UW15 175 aa6.79□□□□□ -1.32
TRAV3-201ENST00000390425 ISOC2Q96AB3 205 aa6.79□□□□□ -1.32
TRAV3-201ENST00000390425 EIF5A2Q9GZV4 153 aaKnown RBP6.79□□□□□ -1.32
TRAV3-201ENST00000390425 TRAV13-1A0A0B4J241 112 aa6.78□□□□□ -1.32
TRAV3-201ENST00000390425 C1orf196B1AJZ1 125 aa6.78□□□□□ -1.32
TRAV3-201ENST00000390425 APOMO95445 188 aa6.78□□□□□ -1.32
TRAV3-201ENST00000390425 MALP21145 153 aa6.78□□□□□ -1.32
TRAV3-201ENST00000390425 FCER1GP30273 86 aa6.78□□□□□ -1.32
TRAV3-201ENST00000390425 RIGQ13278 110 aa6.78□□□□□ -1.32
TRAV3-201ENST00000390425 MRPL51Q4U2R6 128 aaKnown RBP6.78□□□□□ -1.32
TRAV3-201ENST00000390425 C5orf38Q86SI9 138 aa6.78□□□□□ -1.32
TRAV3-201ENST00000390425 C2orf48Q96LS8 159 aa6.78□□□□□ -1.32
TRAV3-201ENST00000390425 hCG_2014768A0A024R1R8 64 aa6.77□□□□□ -1.33
TRAV3-201ENST00000390425 RPL23P62829 140 aaKnown RBP6.77□□□□□ -1.33
TRAV3-201ENST00000390425 C9orf116Q5BN46 136 aaPredicted RBP6.77□□□□□ -1.33
TRAV3-201ENST00000390425 FAM104BQ5XKR9 115 aa6.77□□□□□ -1.33
TRAV3-201ENST00000390425 CAMK2N2Q96S95 79 aa6.77□□□□□ -1.33
TRAV3-201ENST00000390425 TIMM21Q9BVV7 248 aa6.77□□□□□ -1.33
TRAV3-201ENST00000390425 PSORS1C2Q9UIG4 136 aa6.77□□□□□ -1.33
TRAV3-201ENST00000390425 C9JQL5 133 aa6.76□□□□□ -1.33
TRAV3-201ENST00000390425 RPL39P62891 51 aaKnown RBP6.76□□□□□ -1.33
TRAV3-201ENST00000390425 SPAG11BQ08648 103 aa6.76□□□□□ -1.33
TRAV3-201ENST00000390425 OPRPNQ99935 248 aaPredicted RBP6.76□□□□□ -1.33
TRAV3-201ENST00000390425 NAT8BQ9UHF3 227 aa6.76□□□□□ -1.33
TRAV3-201ENST00000390425 TRBV24-1A0A075B6N3 115 aa6.75□□□□□ -1.33
TRAV3-201ENST00000390425 SMIM27A0A1W2PRY6 76 aa6.75□□□□□ -1.33
TRAV3-201ENST00000390425 PPP1R2P9O14990 202 aa6.75□□□□□ -1.33
TRAV3-201ENST00000390425 PPP1R17O96001 155 aa6.75□□□□□ -1.33
TRAV3-201ENST00000390425 RPL32P62910 135 aaKnown RBP6.75□□□□□ -1.33
TRAV3-201ENST00000390425 RPL18AQ02543 176 aaKnown RBP6.75□□□□□ -1.33
TRAV3-201ENST00000390425 FAM74A3Q4VXF1 159 aa6.75□□□□□ -1.33
TRAV3-201ENST00000390425 PHF5AQ7RTV0 110 aaKnown RBP6.75□□□□□ -1.33
TRAV3-201ENST00000390425 KIR2DL4Q99706 377 aa6.75□□□□□ -1.33
TRAV3-201ENST00000390425 IGHV3OR16-9A0A0B4J2B5 98 aa6.74□□□□□ -1.33
TRAV3-201ENST00000390425 SMAGPQ0VAQ4 97 aa6.74□□□□□ -1.33
TRAV3-201ENST00000390425 ADIRFQ15847 76 aa6.74□□□□□ -1.33
TRAV3-201ENST00000390425 TMEM241Q24JQ0 296 aa6.74□□□□□ -1.33
TRAV3-201ENST00000390425 C10orf25Q5T742 122 aa6.74□□□□□ -1.33
TRAV3-201ENST00000390425 KRTAP11-1Q8IUC1 163 aa6.74□□□□□ -1.33
TRAV3-201ENST00000390425 C20orf78Q9BR46 151 aa6.74□□□□□ -1.33
TRAV3-201ENST00000390425 LINC00862A6NCI5 91 aa6.73□□□□□ -1.33
TRAV3-201ENST00000390425 TNFRSF6BO95407 300 aa6.73□□□□□ -1.33
TRAV3-201ENST00000390425 SRSF3P84103 164 aaKnown RBP6.73□□□□□ -1.33
TRAV3-201ENST00000390425 RNF151Q2KHN1 245 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms