RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 AMN1Q8IY45 258 aa8.92□□□□□ -0.98
SHOX-202ENST00000381575 TSKUQ8WUA8 353 aa8.92□□□□□ -0.98
SHOX-202ENST00000381575 TMEM101Q96IK0 257 aa8.92□□□□□ -0.98
SHOX-202ENST00000381575 BTF3L4Q96K17 158 aa8.92□□□□□ -0.98
SHOX-202ENST00000381575 ZNF727A8MUV8 499 aa8.91□□□□□ -0.98
SHOX-202ENST00000381575 ZNF25P17030 456 aaPredicted RBP8.91□□□□□ -0.98
SHOX-202ENST00000381575 MRAP2Q96G30 205 aa8.91□□□□□ -0.98
SHOX-202ENST00000381575 TMEM191AQ9H0A3 160 aa8.91□□□□□ -0.98
SHOX-202ENST00000381575 SRP19P09132 144 aaKnown RBP8.9□□□□□ -0.98
SHOX-202ENST00000381575 RAB4AP20338 218 aa8.9□□□□□ -0.98
SHOX-202ENST00000381575 Q6ZRU5 148 aa8.9□□□□□ -0.98
SHOX-202ENST00000381575 STPG4Q8N801 248 aa8.9□□□□□ -0.98
SHOX-202ENST00000381575 C7orf33Q8WU49 177 aa8.9□□□□□ -0.98
SHOX-202ENST00000381575 FAM210AQ96ND0 272 aa8.9□□□□□ -0.98
SHOX-202ENST00000381575 POLR2KP53803 58 aaKnown RBP8.89□□□□□ -0.99
SHOX-202ENST00000381575 RNASE13Q5GAN3 156 aaKnown RBP8.89□□□□□ -0.99
SHOX-202ENST00000381575 OSTCQ9NRP0 149 aa8.89□□□□□ -0.99
SHOX-202ENST00000381575 C7orf77A4D0Y5 90 aa8.88□□□□□ -0.99
SHOX-202ENST00000381575 CDC42SE2Q9NRR3 84 aa8.88□□□□□ -0.99
SHOX-202ENST00000381575 V9GYV3 84 aa8.88□□□□□ -0.99
SHOX-202ENST00000381575 IGHV1-58A0A0C4DH39 117 aa8.87□□□□□ -0.99
SHOX-202ENST00000381575 TRBV27A0A0K0K1C4 114 aa8.87□□□□□ -0.99
SHOX-202ENST00000381575 ODF1Q14990 250 aa8.87□□□□□ -0.99
SHOX-202ENST00000381575 SS18Q15532 418 aa8.87□□□□□ -0.99
SHOX-202ENST00000381575 ZNF664Q8N3J9 261 aa8.87□□□□□ -0.99
SHOX-202ENST00000381575 NUP35Q8NFH5 326 aa8.87□□□□□ -0.99
SHOX-202ENST00000381575 CARD19Q96LW7 228 aa8.87□□□□□ -0.99
SHOX-202ENST00000381575 FCER1GP30273 86 aa8.86□□□□□ -0.99
SHOX-202ENST00000381575 PRR3P79522 188 aaKnown RBP8.86□□□□□ -0.99
SHOX-202ENST00000381575 MRPL52Q86TS9 123 aaKnown RBP8.86□□□□□ -0.99
SHOX-202ENST00000381575 NRACQ8N912 160 aa8.86□□□□□ -0.99
SHOX-202ENST00000381575 RIGQ13278 110 aa8.86□□□□□ -0.99
SHOX-202ENST00000381575 ISOC2Q96AB3 205 aa8.86□□□□□ -0.99
SHOX-202ENST00000381575 A0A1B0GVG6 124 aa8.85□□□□□ -0.99
SHOX-202ENST00000381575 C9JQL5 133 aa8.85□□□□□ -0.99
SHOX-202ENST00000381575 ADIRFQ15847 76 aa8.85□□□□□ -0.99
SHOX-202ENST00000381575 CD164L2Q6UWJ8 174 aa8.85□□□□□ -0.99
SHOX-202ENST00000381575 ZNF561-AS1K7EIQ3 104 aa8.84□□□□□ -0.99
SHOX-202ENST00000381575 VCYO14598 125 aa8.84□□□□□ -0.99
SHOX-202ENST00000381575 SUMO2P61956 95 aaKnown RBP8.84□□□□□ -0.99
SHOX-202ENST00000381575 RPL23P62829 140 aaKnown RBP8.84□□□□□ -0.99
SHOX-202ENST00000381575 SYCNQ0VAF6 134 aa8.84□□□□□ -0.99
SHOX-202ENST00000381575 MRPL51Q4U2R6 128 aaKnown RBP8.84□□□□□ -0.99
SHOX-202ENST00000381575 Q6ZUT4 128 aa8.84□□□□□ -0.99
SHOX-202ENST00000381575 LRP2P98164 4655 aa8.83□□□□□ -1
SHOX-202ENST00000381575 IGLV4-69A0A075B6H9 119 aa8.83□□□□□ -1
SHOX-202ENST00000381575 TRAV13-1A0A0B4J241 112 aa8.83□□□□□ -1
SHOX-202ENST00000381575 CAMPP49913 170 aa8.83□□□□□ -1
SHOX-202ENST00000381575 SRSF3P84103 164 aaKnown RBP8.83□□□□□ -1
SHOX-202ENST00000381575 TMEM241Q24JQ0 296 aa8.83□□□□□ -1
SHOX-202ENST00000381575 UBE2D4Q9Y2X8 147 aa8.83□□□□□ -1
SHOX-202ENST00000381575 MALP21145 153 aa8.82□□□□□ -1
SHOX-202ENST00000381575 GAGE2BQ13066 116 aa8.82□□□□□ -1
SHOX-202ENST00000381575 C5orf38Q86SI9 138 aa8.82□□□□□ -1
SHOX-202ENST00000381575 NAT8BQ9UHF3 227 aa8.82□□□□□ -1
SHOX-202ENST00000381575 COX7A2LO14548 114 aa8.81□□□□□ -1
SHOX-202ENST00000381575 RPL39P62891 51 aaKnown RBP8.81□□□□□ -1
SHOX-202ENST00000381575 FAM104BQ5XKR9 115 aa8.81□□□□□ -1
SHOX-202ENST00000381575 KIR2DL4Q99706 377 aa8.81□□□□□ -1
SHOX-202ENST00000381575 C1orf196B1AJZ1 125 aa8.8□□□□□ -1
SHOX-202ENST00000381575 PTTG1IPP53801 180 aa8.8□□□□□ -1
SHOX-202ENST00000381575 FAM74A3Q4VXF1 159 aa8.8□□□□□ -1
SHOX-202ENST00000381575 LINC00474Q9P2X8 69 aa8.8□□□□□ -1
SHOX-202ENST00000381575 SMIM27A0A1W2PRY6 76 aa8.79□□□□□ -1
SHOX-202ENST00000381575 MRPL54Q6P161 138 aaKnown RBP8.79□□□□□ -1
SHOX-202ENST00000381575 CAMK2N2Q96S95 79 aa8.79□□□□□ -1
SHOX-202ENST00000381575 NAT8Q9UHE5 227 aa8.79□□□□□ -1
SHOX-202ENST00000381575 A0A0J9YXV3 536 aa8.78□□□□□ -1
SHOX-202ENST00000381575 LOC107984640A0A0U1RRK4 108 aa8.78□□□□□ -1
SHOX-202ENST00000381575 A0A1W2PNN7 141 aa8.78□□□□□ -1
SHOX-202ENST00000381575 PPP1R17O96001 155 aa8.78□□□□□ -1
SHOX-202ENST00000381575 CKS2P33552 79 aa8.78□□□□□ -1
SHOX-202ENST00000381575 LINC01600Q96MT4 127 aa8.78□□□□□ -1
SHOX-202ENST00000381575 OPRPNQ99935 248 aaPredicted RBP8.78□□□□□ -1
SHOX-202ENST00000381575 PKIGQ9Y2B9 76 aa8.78□□□□□ -1
SHOX-202ENST00000381575 CSDC2Q9Y534 153 aaKnown RBP8.78□□□□□ -1
SHOX-202ENST00000381575 PPP1R2P9O14990 202 aa8.77□□□□□ -1.01
SHOX-202ENST00000381575 RPL18AQ02543 176 aaKnown RBP8.77□□□□□ -1.01
SHOX-202ENST00000381575 D6R8Y8 96 aa8.76□□□□□ -1.01
SHOX-202ENST00000381575 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.76□□□□□ -1.01
SHOX-202ENST00000381575 TNFRSF6BO95407 300 aa8.76□□□□□ -1.01
SHOX-202ENST00000381575 NPYP01303 97 aa8.76□□□□□ -1.01
SHOX-202ENST00000381575 SPAG11BQ08648 103 aa8.76□□□□□ -1.01
SHOX-202ENST00000381575 SMAGPQ0VAQ4 97 aa8.76□□□□□ -1.01
SHOX-202ENST00000381575 FAM104AQ969W3 186 aa8.76□□□□□ -1.01
SHOX-202ENST00000381575 SMIM2Q9BVW6 85 aa8.76□□□□□ -1.01
SHOX-202ENST00000381575 TCAPO15273 167 aa8.75□□□□□ -1.01
SHOX-202ENST00000381575 APOMO95445 188 aa8.75□□□□□ -1.01
SHOX-202ENST00000381575 Q6ZRP5 223 aa8.75□□□□□ -1.01
SHOX-202ENST00000381575 C20orf78Q9BR46 151 aa8.75□□□□□ -1.01
SHOX-202ENST00000381575 TIMM21Q9BVV7 248 aa8.75□□□□□ -1.01
SHOX-202ENST00000381575 TRBV24-1A0A075B6N3 115 aa8.74□□□□□ -1.01
SHOX-202ENST00000381575 PEA15Q15121 130 aa8.74□□□□□ -1.01
SHOX-202ENST00000381575 C9orf116Q5BN46 136 aaPredicted RBP8.74□□□□□ -1.01
SHOX-202ENST00000381575 TMEM18Q96B42 140 aa8.74□□□□□ -1.01
SHOX-202ENST00000381575 A0A1B0GXF2 115 aa8.73□□□□□ -1.01
SHOX-202ENST00000381575 LINC00862A6NCI5 91 aa8.73□□□□□ -1.01
SHOX-202ENST00000381575 HBBP68871 147 aa8.73□□□□□ -1.01
SHOX-202ENST00000381575 SRSF9Q13242 221 aaKnown RBP eCLIP8.73□□□□□ -1.01
SHOX-202ENST00000381575 SPINK6Q6UWN8 80 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms