RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 CFC1BP0CG36 223 aa5.52□□□□□ -1.53
CDKL5-202ENST00000379996 CFC1P0CG37 223 aa5.52□□□□□ -1.53
CDKL5-202ENST00000379996 C11orf72Q8NBR9 251 aa5.52□□□□□ -1.53
CDKL5-202ENST00000379996 PYGO1Q9Y3Y4 419 aa5.52□□□□□ -1.53
CDKL5-202ENST00000379996 TRRAPQ9Y4A5 3859 aa5.52□□□□□ -1.53
CDKL5-202ENST00000379996 GIG44P09565 113 aaPredicted RBP5.52□□□□□ -1.53
CDKL5-202ENST00000379996 ZNF22P17026 224 aaPredicted RBP5.52□□□□□ -1.53
CDKL5-202ENST00000379996 VPS25Q9BRG1 176 aa5.52□□□□□ -1.53
CDKL5-202ENST00000379996 KNCNA6PVL3 124 aa5.52□□□□□ -1.53
CDKL5-202ENST00000379996 SPINK13Q1W4C9 94 aa5.52□□□□□ -1.53
CDKL5-202ENST00000379996 ATP6V0E2Q8NHE4 81 aa5.52□□□□□ -1.53
CDKL5-202ENST00000379996 OPRPNQ99935 248 aaPredicted RBP5.52□□□□□ -1.53
CDKL5-202ENST00000379996 APOC4P55056 127 aa5.51□□□□□ -1.53
CDKL5-202ENST00000379996 ATRQ13535 2644 aa5.51□□□□□ -1.53
CDKL5-202ENST00000379996 LEPROTO15243 131 aa5.51□□□□□ -1.53
CDKL5-202ENST00000379996 MRPS36P82909 103 aaKnown RBP5.51□□□□□ -1.53
CDKL5-202ENST00000379996 CHCHD7Q9BUK0 85 aa5.51□□□□□ -1.53
CDKL5-202ENST00000379996 Q9UF83 564 aa5.51□□□□□ -1.53
CDKL5-202ENST00000379996 RHODO00212 210 aa5.51□□□□□ -1.53
CDKL5-202ENST00000379996 INSP01308 110 aa5.51□□□□□ -1.53
CDKL5-202ENST00000379996 CRYBA4P53673 196 aa5.51□□□□□ -1.53
CDKL5-202ENST00000379996 EMP1P54849 157 aa5.51□□□□□ -1.53
CDKL5-202ENST00000379996 Q6ZSN1 163 aa5.51□□□□□ -1.53
CDKL5-202ENST00000379996 C10orf126Q8N4M7 172 aa5.51□□□□□ -1.53
CDKL5-202ENST00000379996 KIR2DL4Q99706 377 aa5.51□□□□□ -1.53
CDKL5-202ENST00000379996 M0QXV9 152 aa5.5□□□□□ -1.53
CDKL5-202ENST00000379996 M0R2P5 195 aa5.5□□□□□ -1.53
CDKL5-202ENST00000379996 COTL1Q14019 142 aa5.5□□□□□ -1.53
CDKL5-202ENST00000379996 TMEM263Q8WUH6 116 aaKnown RBP5.5□□□□□ -1.53
CDKL5-202ENST00000379996 SETD2Q9BYW2 2564 aaPredicted RBP5.5□□□□□ -1.53
CDKL5-202ENST00000379996 I3L3M4 83 aa5.5□□□□□ -1.53
CDKL5-202ENST00000379996 SH2D6Q7Z4S9 175 aa5.5□□□□□ -1.53
CDKL5-202ENST00000379996 WWC2-AS2Q96NR7 200 aa5.5□□□□□ -1.53
CDKL5-202ENST00000379996 SMIM9A6NGZ8 99 aa5.49□□□□□ -1.53
CDKL5-202ENST00000379996 J3QQQ9 107 aa5.49□□□□□ -1.53
CDKL5-202ENST00000379996 IGHV4-30-4P0DP06 118 aa5.49□□□□□ -1.53
CDKL5-202ENST00000379996 VWFP04275 2813 aa5.49□□□□□ -1.53
CDKL5-202ENST00000379996 FAM19A3Q7Z5A8 133 aa5.49□□□□□ -1.53
CDKL5-202ENST00000379996 DEFB104AQ8WTQ1 72 aa5.49□□□□□ -1.53
CDKL5-202ENST00000379996 NHLRC4P0CG21 123 aaPredicted RBP5.49□□□□□ -1.53
CDKL5-202ENST00000379996 SERTAD4-AS1Q5TG53 156 aa5.49□□□□□ -1.53
CDKL5-202ENST00000379996 CARD19Q96LW7 228 aa5.49□□□□□ -1.53
CDKL5-202ENST00000379996 JMJD1CQ15652 2540 aa5.49□□□□□ -1.53
CDKL5-202ENST00000379996 IGLV5-45A0A087WSX0 123 aa5.48□□□□□ -1.53
CDKL5-202ENST00000379996 A0A0B4J2C4 111 aa5.48□□□□□ -1.53
CDKL5-202ENST00000379996 TMEM238C9JI98 176 aa5.48□□□□□ -1.53
CDKL5-202ENST00000379996 SCGB1A1P11684 91 aa5.48□□□□□ -1.53
CDKL5-202ENST00000379996 C1orf158Q8N1D5 194 aa5.48□□□□□ -1.53
CDKL5-202ENST00000379996 WFDC10AQ9H1F0 79 aa5.48□□□□□ -1.53
CDKL5-202ENST00000379996 UBE2D4Q9Y2X8 147 aa5.48□□□□□ -1.53
CDKL5-202ENST00000379996 TCL1BO95988 128 aa5.48□□□□□ -1.53
CDKL5-202ENST00000379996 ZNF56Q15929 161 aa5.48□□□□□ -1.53
CDKL5-202ENST00000379996 FAM74A4Q5TZK3 123 aa5.48□□□□□ -1.53
CDKL5-202ENST00000379996 PRM2P04554 102 aa5.47□□□□□ -1.53
CDKL5-202ENST00000379996 HERVK_113P61574 105 aa5.47□□□□□ -1.53
CDKL5-202ENST00000379996 ETDBQ3ZM63 59 aa5.47□□□□□ -1.53
CDKL5-202ENST00000379996 RNF183Q96D59 192 aa5.47□□□□□ -1.53
CDKL5-202ENST00000379996 DNHD1Q96M86 4753 aa5.47□□□□□ -1.53
CDKL5-202ENST00000379996 K7EIL1 84 aa5.47□□□□□ -1.53
CDKL5-202ENST00000379996 IGKV3-20P01619 116 aa5.47□□□□□ -1.53
CDKL5-202ENST00000379996 IGHV3-33P01772 117 aa5.47□□□□□ -1.53
CDKL5-202ENST00000379996 MTURNQ8N3F0 131 aa5.47□□□□□ -1.53
CDKL5-202ENST00000379996 A0A0J9YXV3 536 aa5.46□□□□□ -1.53
CDKL5-202ENST00000379996 A0A0J9YXY3 114 aa5.46□□□□□ -1.53
CDKL5-202ENST00000379996 GAGE12HA6NDE8 117 aa5.46□□□□□ -1.53
CDKL5-202ENST00000379996 FOXI1Q12951 378 aa5.46□□□□□ -1.53
CDKL5-202ENST00000379996 SPANXDQ9BXN6 97 aa5.46□□□□□ -1.53
CDKL5-202ENST00000379996 SPANXCQ9NY87 97 aa5.46□□□□□ -1.53
CDKL5-202ENST00000379996 RS1O15537 224 aa5.46□□□□□ -1.54
CDKL5-202ENST00000379996 MRPL16Q9NX20 251 aaKnown RBP5.46□□□□□ -1.54
CDKL5-202ENST00000379996 COL6A5A8TX70 2615 aa5.46□□□□□ -1.54
CDKL5-202ENST00000379996 TINCRA0A1B0GVN0 87 aa5.46□□□□□ -1.54
CDKL5-202ENST00000379996 C16orf74Q96GX8 76 aa5.46□□□□□ -1.54
CDKL5-202ENST00000379996 TM2D3Q9BRN9 247 aa5.46□□□□□ -1.54
CDKL5-202ENST00000379996 OVOL2Q9BRP0 275 aa5.46□□□□□ -1.54
CDKL5-202ENST00000379996 STAB1Q9NY15 2570 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 IGHV3-53P01767 116 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 IGHV3-30-3P0DP02 117 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 DAZ2Q13117 558 aaKnown RBP5.45□□□□□ -1.54
CDKL5-202ENST00000379996 LINC00612Q8N6U2 182 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 A8MWV9 139 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 AZU1P20160 251 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 TMEM170BQ5T4T1 132 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 SCGB1D4Q6XE38 83 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 SPXQ9BT56 116 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 C11orf68Q9H3H3 251 aaKnown RBP5.45□□□□□ -1.54
CDKL5-202ENST00000379996 PLAC8L1A1L4L8 177 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 A4D1N5 150 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 MIFP14174 115 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 ADAMTSL4-AS1Q5T5F5 129 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 PRO1854Q9UHT4 67 aa5.45□□□□□ -1.54
CDKL5-202ENST00000379996 IGHV1-58A0A0C4DH39 117 aa5.44□□□□□ -1.54
CDKL5-202ENST00000379996 CIDEAO60543 219 aa5.44□□□□□ -1.54
CDKL5-202ENST00000379996 RPL35AP18077 110 aaKnown RBP5.44□□□□□ -1.54
CDKL5-202ENST00000379996 RPL24P83731 157 aaKnown RBP5.44□□□□□ -1.54
CDKL5-202ENST00000379996 CEMP1Q6PRD7 247 aaPredicted RBP5.44□□□□□ -1.54
CDKL5-202ENST00000379996 VSIG2Q96IQ7 327 aa5.44□□□□□ -1.54
CDKL5-202ENST00000379996 TRBV20-1A0A075B6N2 111 aa5.44□□□□□ -1.54
CDKL5-202ENST00000379996 ZNF415Q09FC8 603 aa5.44□□□□□ -1.54
CDKL5-202ENST00000379996 MUSTN1Q8IVN3 82 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms