RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 ORMDL3Q8N138 153 aa14.41□□□□□ -0.1
SRM-201ENST00000376957 CHCHD10Q8WYQ3 142 aaPredicted RBP14.41□□□□□ -0.1
SRM-201ENST00000376957 KRTAP4-5Q9BYR2 181 aa14.41□□□□□ -0.1
SRM-201ENST00000376957 FAM30AQ9NZY2 134 aa14.41□□□□□ -0.1
SRM-201ENST00000376957 LINC01620Q4KN68 170 aa14.4□□□□□ -0.1
SRM-201ENST00000376957 CSDC2Q9Y534 153 aaKnown RBP14.4□□□□□ -0.1
SRM-201ENST00000376957 DNAH5Q8TE73 4624 aa14.4□□□□□ -0.1
SRM-201ENST00000376957 PCLOQ9Y6V0 5065 aa14.4□□□□□ -0.1
SRM-201ENST00000376957 SMR3BP02814 79 aaPredicted RBP14.39□□□□□ -0.11
SRM-201ENST00000376957 IFITM2Q01629 132 aa14.39□□□□□ -0.11
SRM-201ENST00000376957 Q5VSD8 79 aa14.39□□□□□ -0.11
SRM-201ENST00000376957 ZNF664Q8N3J9 261 aa14.39□□□□□ -0.11
SRM-201ENST00000376957 RAB5AP20339 215 aa14.38□□□□□ -0.11
SRM-201ENST00000376957 TMEM136Q6ZRR5 245 aa14.38□□□□□ -0.11
SRM-201ENST00000376957 SMIM2Q9BVW6 85 aa14.38□□□□□ -0.11
SRM-201ENST00000376957 CDC42SE2Q9NRR3 84 aa14.38□□□□□ -0.11
SRM-201ENST00000376957 TMEM218A2RU14 115 aa14.37□□□□□ -0.11
SRM-201ENST00000376957 CCL25O15444 150 aa14.37□□□□□ -0.11
SRM-201ENST00000376957 HAMPP81172 84 aa14.37□□□□□ -0.11
SRM-201ENST00000376957 C9orf163Q8N9P6 203 aa14.37□□□□□ -0.11
SRM-201ENST00000376957 IMMP2LQ96T52 175 aa14.37□□□□□ -0.11
SRM-201ENST00000376957 LAMTOR2Q9Y2Q5 125 aa14.37□□□□□ -0.11
SRM-201ENST00000376957 LINC00959A0A1B0GUT2 108 aa14.36□□□□□ -0.11
SRM-201ENST00000376957 CNBPP62633 177 aaKnown RBP14.36□□□□□ -0.11
SRM-201ENST00000376957 PRELID3AQ96N28 172 aa14.36□□□□□ -0.11
SRM-201ENST00000376957 CTDSP1Q9GZU7 261 aa14.36□□□□□ -0.11
SRM-201ENST00000376957 HSPG2P98160 4391 aa14.35□□□□□ -0.11
SRM-201ENST00000376957 XCL1P47992 114 aa14.35□□□□□ -0.11
SRM-201ENST00000376957 CHAC1Q9BUX1 264 aa14.35□□□□□ -0.11
SRM-201ENST00000376957 TIMM21Q9BVV7 248 aa14.35□□□□□ -0.11
SRM-201ENST00000376957 C1orf196B1AJZ1 125 aa14.34□□□□□ -0.11
SRM-201ENST00000376957 PLA2G1BP04054 148 aaKnown RBP14.34□□□□□ -0.11
SRM-201ENST00000376957 SEC11CQ9BY50 192 aa14.34□□□□□ -0.11
SRM-201ENST00000376957 UBE2D4Q9Y2X8 147 aa14.34□□□□□ -0.11
SRM-201ENST00000376957 IGHV3-64A0A075B6Q5 118 aa14.33□□□□□ -0.12
SRM-201ENST00000376957 NPYP01303 97 aa14.33□□□□□ -0.12
SRM-201ENST00000376957 S100PP25815 95 aa14.32□□□□□ -0.12
SRM-201ENST00000376957 CD164L2Q6UWJ8 174 aa14.32□□□□□ -0.12
SRM-201ENST00000376957 APOBP04114 4563 aaKnown RBP14.32□□□□□ -0.12
SRM-201ENST00000376957 FOXI1Q12951 378 aa14.31□□□□□ -0.12
SRM-201ENST00000376957 SCXQ7RTU7 201 aa14.31□□□□□ -0.12
SRM-201ENST00000376957 COMMD7Q86VX2 200 aa14.31□□□□□ -0.12
SRM-201ENST00000376957 MAP1LC3AQ9H492 121 aa14.31□□□□□ -0.12
SRM-201ENST00000376957 SPANXA1Q9NS26 97 aa14.31□□□□□ -0.12
SRM-201ENST00000376957 TRAV9-1A0A075B6T8 112 aa14.3□□□□□ -0.12
SRM-201ENST00000376957 IGHV1-58A0A0C4DH39 117 aa14.3□□□□□ -0.12
SRM-201ENST00000376957 INAFM2P0DMQ5 153 aa14.3□□□□□ -0.12
SRM-201ENST00000376957 C15orf56Q8N910 161 aa14.29□□□□□ -0.12
SRM-201ENST00000376957 DPH3Q96FX2 82 aa14.29□□□□□ -0.12
SRM-201ENST00000376957 PKIGQ9Y2B9 76 aa14.29□□□□□ -0.12
SRM-201ENST00000376957 ADCYAP1P18509 176 aa14.28□□□□□ -0.12
SRM-201ENST00000376957 MALP21145 153 aa14.28□□□□□ -0.12
SRM-201ENST00000376957 GVQW2A0A096LPI5 108 aaPredicted RBP14.27□□□□□ -0.13
SRM-201ENST00000376957 PRSS47A8MTI9 375 aa14.27□□□□□ -0.13
SRM-201ENST00000376957 HIGD2BQ4VC39 106 aa14.27□□□□□ -0.13
SRM-201ENST00000376957 LINC00528Q8N1L1 170 aa14.27□□□□□ -0.13
SRM-201ENST00000376957 CIRBP-AS1Q8TBR5 109 aa14.27□□□□□ -0.13
SRM-201ENST00000376957 TRAV13-1A0A0B4J241 112 aa14.26□□□□□ -0.13
SRM-201ENST00000376957 ZNF561-AS1K7EIQ3 104 aa14.26□□□□□ -0.13
SRM-201ENST00000376957 IFI27P40305 119 aaPredicted RBP14.26□□□□□ -0.13
SRM-201ENST00000376957 SDIM1Q6ZPB5 146 aa14.26□□□□□ -0.13
SRM-201ENST00000376957 LOC389332A0A1B0GUA5 103 aa14.25□□□□□ -0.13
SRM-201ENST00000376957 COX7A2LO14548 114 aa14.25□□□□□ -0.13
SRM-201ENST00000376957 K7EMI3 77 aa14.24□□□□□ -0.13
SRM-201ENST00000376957 APOMO95445 188 aa14.24□□□□□ -0.13
SRM-201ENST00000376957 G0S2P27469 103 aa14.24□□□□□ -0.13
SRM-201ENST00000376957 RPL39P62891 51 aaKnown RBP14.24□□□□□ -0.13
SRM-201ENST00000376957 Q6ZUT4 128 aa14.24□□□□□ -0.13
SRM-201ENST00000376957 MRPS36P82909 103 aaKnown RBP14.23□□□□□ -0.13
SRM-201ENST00000376957 COX19Q49B96 90 aa14.23□□□□□ -0.13
SRM-201ENST00000376957 ORMDL2Q53FV1 153 aa14.23□□□□□ -0.13
SRM-201ENST00000376957 RNASE13Q5GAN3 156 aaKnown RBP14.23□□□□□ -0.13
SRM-201ENST00000376957 NXT2Q9NPJ8 142 aaKnown RBP14.23□□□□□ -0.13
SRM-201ENST00000376957 Q8N8P6 123 aa14.22□□□□□ -0.13
SRM-201ENST00000376957 ABCA13Q86UQ4 5058 aa14.21□□□□□ -0.13
SRM-201ENST00000376957 RHEBQ15382 184 aa14.21□□□□□ -0.13
SRM-201ENST00000376957 SLPIP03973 132 aa14.2□□□□□ -0.14
SRM-201ENST00000376957 CYSLTR1Q9Y271 337 aa14.2□□□□□ -0.14
SRM-201ENST00000376957 PYGO1Q9Y3Y4 419 aa14.2□□□□□ -0.14
SRM-201ENST00000376957 IFITM10A6NMD0 228 aa14.19□□□□□ -0.14
SRM-201ENST00000376957 NDUFA5Q16718 116 aa14.19□□□□□ -0.14
SRM-201ENST00000376957 RPS10P5Q9NQ39 176 aa14.19□□□□□ -0.14
SRM-201ENST00000376957 C10orf91Q5T1B1 145 aa14.18□□□□□ -0.14
SRM-201ENST00000376957 Q6ZN92 141 aa14.18□□□□□ -0.14
SRM-201ENST00000376957 CARD19Q96LW7 228 aa14.18□□□□□ -0.14
SRM-201ENST00000376957 GNB1LQ9BYB4 327 aa14.18□□□□□ -0.14
SRM-201ENST00000376957 CARHSP1Q9Y2V2 147 aaKnown RBP14.18□□□□□ -0.14
SRM-201ENST00000376957 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.18□□□□□ -0.14
SRM-201ENST00000376957 COX6A2Q02221 97 aa14.17□□□□□ -0.14
SRM-201ENST00000376957 TMEM141Q96I45 108 aa14.17□□□□□ -0.14
SRM-201ENST00000376957 LINC00474Q9P2X8 69 aa14.17□□□□□ -0.14
SRM-201ENST00000376957 SYCNQ0VAF6 134 aa14.16□□□□□ -0.14
SRM-201ENST00000376957 C2orf88Q9BSF0 95 aa14.16□□□□□ -0.14
SRM-201ENST00000376957 TGIF2-C20orf24A0A0A6YYL0 155 aa14.15□□□□□ -0.14
SRM-201ENST00000376957 MT-ND6P03923 174 aa14.15□□□□□ -0.14
SRM-201ENST00000376957 CIRBPQ14011 172 aaKnown RBP14.15□□□□□ -0.14
SRM-201ENST00000376957 PAPPA-AS1Q5QFB9 102 aa14.15□□□□□ -0.14
SRM-201ENST00000376957 C2orf66Q6UXQ4 117 aa14.15□□□□□ -0.14
SRM-201ENST00000376957 TEX43Q6ZNM6 134 aa14.15□□□□□ -0.14
SRM-201ENST00000376957 C5orf38Q86SI9 138 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms