RNA–Protein interactions for RNA: ENST00000376630.4

HLA-E-201, Transcript of major histocompatibility complex, class I, E, humanhuman

APPRIS P1 BASIC

Gene HLA-E, Length 2,601 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-201ENST00000376630 TRBV12-3P01733 135 aa9.66□□□□□ -0.86
HLA-E-201ENST00000376630 PSMB8P28062 276 aa9.66□□□□□ -0.86
HLA-E-201ENST00000376630 C2orf66Q6UXQ4 117 aa9.66□□□□□ -0.86
HLA-E-201ENST00000376630 PKIGQ9Y2B9 76 aa9.66□□□□□ -0.86
HLA-E-201ENST00000376630 ICOSQ9Y6W8 199 aa9.66□□□□□ -0.86
HLA-E-201ENST00000376630 STAB1Q9NY15 2570 aa9.66□□□□□ -0.86
HLA-E-201ENST00000376630 A0A1W2PRX2 142 aa9.66□□□□□ -0.86
HLA-E-201ENST00000376630 PDE6HQ13956 83 aa9.66□□□□□ -0.86
HLA-E-201ENST00000376630 CLEC19AQ6UXS0 136 aa9.66□□□□□ -0.86
HLA-E-201ENST00000376630 SPRY2O43597 315 aa9.65□□□□□ -0.86
HLA-E-201ENST00000376630 SERP2Q8N6R1 65 aa9.65□□□□□ -0.86
HLA-E-201ENST00000376630 DCANP1Q8TF63 244 aa9.65□□□□□ -0.86
HLA-E-201ENST00000376630 COX6CP09669 75 aa9.65□□□□□ -0.87
HLA-E-201ENST00000376630 CD28P10747 220 aa9.65□□□□□ -0.87
HLA-E-201ENST00000376630 RPL18AQ02543 176 aaKnown RBP9.65□□□□□ -0.87
HLA-E-201ENST00000376630 DEFB136Q30KP8 78 aa9.65□□□□□ -0.87
HLA-E-201ENST00000376630 CCDC140Q96MF4 163 aa9.65□□□□□ -0.87
HLA-E-201ENST00000376630 V9GYY9 64 aa9.65□□□□□ -0.87
HLA-E-201ENST00000376630 F8W735 103 aaPredicted RBP9.64□□□□□ -0.87
HLA-E-201ENST00000376630 ZNF415Q09FC8 603 aa9.64□□□□□ -0.87
HLA-E-201ENST00000376630 Q8TAT8 98 aa9.64□□□□□ -0.87
HLA-E-201ENST00000376630 PEMTQ9UBM1 199 aa9.64□□□□□ -0.87
HLA-E-201ENST00000376630 KRTAP24-1Q3LI83 254 aa9.64□□□□□ -0.87
HLA-E-201ENST00000376630 C9orf85Q96MD7 179 aa9.64□□□□□ -0.87
HLA-E-201ENST00000376630 NSUN5P1Q3KNT7 163 aa9.63□□□□□ -0.87
HLA-E-201ENST00000376630 CLEC2BQ92478 149 aa9.63□□□□□ -0.87
HLA-E-201ENST00000376630 CLPSL1A2RUU4 121 aa9.63□□□□□ -0.87
HLA-E-201ENST00000376630 LGALS3P17931 250 aaKnown RBP9.63□□□□□ -0.87
HLA-E-201ENST00000376630 KRTAP10-3P60369 221 aa9.63□□□□□ -0.87
HLA-E-201ENST00000376630 RHOHQ15669 191 aa9.63□□□□□ -0.87
HLA-E-201ENST00000376630 C16orf95Q9H693 158 aa9.63□□□□□ -0.87
HLA-E-201ENST00000376630 PROK1P58294 105 aa9.62□□□□□ -0.87
HLA-E-201ENST00000376630 IGKV1-17P01599 117 aa9.62□□□□□ -0.87
HLA-E-201ENST00000376630 SUMO2P61956 95 aaKnown RBP9.62□□□□□ -0.87
HLA-E-201ENST00000376630 ZNF491Q8N8L2 437 aa9.61□□□□□ -0.87
HLA-E-201ENST00000376630 NOTCH3Q9UM47 2321 aa9.61□□□□□ -0.87
HLA-E-201ENST00000376630 FAM223BA6NKX1 122 aa9.61□□□□□ -0.87
HLA-E-201ENST00000376630 EPM2AB3EWF7 344 aa9.61□□□□□ -0.87
HLA-E-201ENST00000376630 TSHBP01222 138 aa9.61□□□□□ -0.87
HLA-E-201ENST00000376630 CTSGP08311 255 aa9.61□□□□□ -0.87
HLA-E-201ENST00000376630 FAM223AQ8IWN6 122 aa9.61□□□□□ -0.87
HLA-E-201ENST00000376630 TIMM21Q9BVV7 248 aa9.61□□□□□ -0.87
HLA-E-201ENST00000376630 ZNF580Q9UK33 172 aa9.61□□□□□ -0.87
HLA-E-201ENST00000376630 IGHV4-4A0A075B6R2 117 aa9.59□□□□□ -0.87
HLA-E-201ENST00000376630 IGKV3D-20A0A0C4DH25 116 aa9.59□□□□□ -0.87
HLA-E-201ENST00000376630 H3BUA1 57 aa9.59□□□□□ -0.87
HLA-E-201ENST00000376630 USMG5Q96IX5 58 aa9.59□□□□□ -0.87
HLA-E-201ENST00000376630 SLC50A1Q9BRV3 221 aa9.59□□□□□ -0.87
HLA-E-201ENST00000376630 VWFP04275 2813 aa9.59□□□□□ -0.87
HLA-E-201ENST00000376630 TRAV8-3A0A0A6YYJ7 113 aa9.59□□□□□ -0.87
HLA-E-201ENST00000376630 NDUFC2-KCTD14E9PQ53 114 aa9.59□□□□□ -0.87
HLA-E-201ENST00000376630 IGHV7-4-1A0A0J9YVY3 117 aa9.58□□□□□ -0.88
HLA-E-201ENST00000376630 TRRAPQ9Y4A5 3859 aa9.58□□□□□ -0.88
HLA-E-201ENST00000376630 IGHV3OR16-13A0A075B7E8 117 aa9.58□□□□□ -0.88
HLA-E-201ENST00000376630 IGHV3-74A0A0B4J1X5 117 aa9.58□□□□□ -0.88
HLA-E-201ENST00000376630 UBE2E2Q96LR5 201 aa9.58□□□□□ -0.88
HLA-E-201ENST00000376630 IGHV4OR15-8A0A075B7B6 117 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 A0A087WW49 117 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 IGHV3-49A0A0A0MS15 119 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 A0A0J9YX75 114 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 FAM236DA0A1B0GTK5 79 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 I3L3M4 83 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 LEPROTO15243 131 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 FAM236CP0DP71 79 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 KLK9Q2XQG4 91 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 KLK9Q9UKQ9 250 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 SDHAF1A6NFY7 115 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 IGIPA6NJ69 53 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 UNQ9165/PRO28630Q6UXU0 137 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 DAND5Q8N907 189 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 RNF125Q96EQ8 232 aa9.57□□□□□ -0.88
HLA-E-201ENST00000376630 SYNJ2BPP57105 145 aa9.56□□□□□ -0.88
HLA-E-201ENST00000376630 C11orf21Q9P2W6 132 aa9.56□□□□□ -0.88
HLA-E-201ENST00000376630 IGHV3-66A0A0C4DH42 116 aa9.55□□□□□ -0.88
HLA-E-201ENST00000376630 TMEM89A2RUT3 159 aa9.55□□□□□ -0.88
HLA-E-201ENST00000376630 SLURP1P55000 103 aa9.55□□□□□ -0.88
HLA-E-201ENST00000376630 NPC2P61916 151 aa9.55□□□□□ -0.88
HLA-E-201ENST00000376630 FHL2Q14192 279 aa9.55□□□□□ -0.88
HLA-E-201ENST00000376630 ZNF876PQ49A33 203 aa9.55□□□□□ -0.88
HLA-E-201ENST00000376630 C1orf195Q5TG92 126 aa9.55□□□□□ -0.88
HLA-E-201ENST00000376630 SPANXN1Q5VSR9 72 aa9.55□□□□□ -0.88
HLA-E-201ENST00000376630 TRAV12-2A0A075B6T6 113 aa9.54□□□□□ -0.88
HLA-E-201ENST00000376630 NDUFC2O95298 119 aa9.54□□□□□ -0.88
HLA-E-201ENST00000376630 RPL39LQ96EH5 51 aaKnown RBP9.54□□□□□ -0.88
HLA-E-201ENST00000376630 A0A0J9YXY3 114 aa9.54□□□□□ -0.88
HLA-E-201ENST00000376630 PRSS2P07478 247 aa9.54□□□□□ -0.88
HLA-E-201ENST00000376630 HOXD3P31249 432 aaPredicted RBP9.54□□□□□ -0.88
HLA-E-201ENST00000376630 ADARB2-AS1A8MUL3 147 aa9.53□□□□□ -0.88
HLA-E-201ENST00000376630 C4orf3Q8WVX3 66 aa9.53□□□□□ -0.88
HLA-E-201ENST00000376630 TMEM141Q96I45 108 aa9.53□□□□□ -0.88
HLA-E-201ENST00000376630 LITAFQ99732 161 aa9.53□□□□□ -0.88
HLA-E-201ENST00000376630 TP53TG1Q9Y2A0 90 aa9.52□□□□□ -0.88
HLA-E-201ENST00000376630 SERP1Q9Y6X1 66 aa9.52□□□□□ -0.88
HLA-E-201ENST00000376630 TIRAPP58753 221 aa9.52□□□□□ -0.89
HLA-E-201ENST00000376630 DAZ2Q13117 558 aaKnown RBP9.52□□□□□ -0.89
HLA-E-201ENST00000376630 DAZ4Q86SG3 579 aaKnown RBP9.52□□□□□ -0.89
HLA-E-201ENST00000376630 TIMM17AQ99595 171 aa9.52□□□□□ -0.89
HLA-E-201ENST00000376630 DAZ1Q9NQZ3 744 aaKnown RBP9.52□□□□□ -0.89
HLA-E-201ENST00000376630 DAZ3Q9NR90 486 aaKnown RBP9.52□□□□□ -0.89
HLA-E-201ENST00000376630 M0R381 172 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms