RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 CT83Q5H943 113 aa10.09□□□□□ -0.79
HDAC8-202ENST00000373556 MRAP2Q96G30 205 aa10.09□□□□□ -0.79
HDAC8-202ENST00000373556 LRP2P98164 4655 aa10.08□□□□□ -0.8
HDAC8-202ENST00000373556 CARD19Q96LW7 228 aa10.08□□□□□ -0.8
HDAC8-202ENST00000373556 CDC42SE2Q9NRR3 84 aa10.08□□□□□ -0.8
HDAC8-202ENST00000373556 RNF213Q63HN8 5207 aa10.07□□□□□ -0.8
HDAC8-202ENST00000373556 A0A1B0GUT8 65 aa10.07□□□□□ -0.8
HDAC8-202ENST00000373556 HIGD1CA8MV81 97 aa10.07□□□□□ -0.8
HDAC8-202ENST00000373556 POLR2KP53803 58 aaKnown RBP10.07□□□□□ -0.8
HDAC8-202ENST00000373556 SS18Q15532 418 aa10.07□□□□□ -0.8
HDAC8-202ENST00000373556 TSKUQ8WUA8 353 aa10.07□□□□□ -0.8
HDAC8-202ENST00000373556 LINC01600Q96MT4 127 aa10.07□□□□□ -0.8
HDAC8-202ENST00000373556 TMEM191AQ9H0A3 160 aa10.07□□□□□ -0.8
HDAC8-202ENST00000373556 SMKR1H3BMG3 65 aa10.06□□□□□ -0.8
HDAC8-202ENST00000373556 RAB4AP20338 218 aa10.06□□□□□ -0.8
HDAC8-202ENST00000373556 MRPL52Q86TS9 123 aaKnown RBP10.06□□□□□ -0.8
HDAC8-202ENST00000373556 LINC01551Q86U37 167 aa10.06□□□□□ -0.8
HDAC8-202ENST00000373556 AMN1Q8IY45 258 aa10.06□□□□□ -0.8
HDAC8-202ENST00000373556 ZNF664Q8N3J9 261 aa10.06□□□□□ -0.8
HDAC8-202ENST00000373556 SMIM7Q9BQ49 75 aa10.06□□□□□ -0.8
HDAC8-202ENST00000373556 LINC00474Q9P2X8 69 aa10.06□□□□□ -0.8
HDAC8-202ENST00000373556 TRBV27A0A0K0K1C4 114 aa10.05□□□□□ -0.8
HDAC8-202ENST00000373556 C7orf77A4D0Y5 90 aa10.05□□□□□ -0.8
HDAC8-202ENST00000373556 ZNF561-AS1K7EIQ3 104 aa10.05□□□□□ -0.8
HDAC8-202ENST00000373556 SYCNQ0VAF6 134 aa10.05□□□□□ -0.8
HDAC8-202ENST00000373556 CD164L2Q6UWJ8 174 aa10.05□□□□□ -0.8
HDAC8-202ENST00000373556 EIF5A2Q9GZV4 153 aaKnown RBP10.05□□□□□ -0.8
HDAC8-202ENST00000373556 AKAP14Q86UN6 197 aa10.04□□□□□ -0.8
HDAC8-202ENST00000373556 PKIGQ9Y2B9 76 aa10.04□□□□□ -0.8
HDAC8-202ENST00000373556 hCG_2014768A0A024R1R8 64 aa10.03□□□□□ -0.8
HDAC8-202ENST00000373556 CAMPP49913 170 aa10.03□□□□□ -0.8
HDAC8-202ENST00000373556 RNASE13Q5GAN3 156 aaKnown RBP10.03□□□□□ -0.8
HDAC8-202ENST00000373556 OSTCQ9NRP0 149 aa10.03□□□□□ -0.8
HDAC8-202ENST00000373556 IGLV4-69A0A075B6H9 119 aa10.02□□□□□ -0.81
HDAC8-202ENST00000373556 ZNF727A8MUV8 499 aa10.02□□□□□ -0.81
HDAC8-202ENST00000373556 MALP21145 153 aa10.02□□□□□ -0.81
HDAC8-202ENST00000373556 FCER1GP30273 86 aa10.02□□□□□ -0.81
HDAC8-202ENST00000373556 FAM210AQ96ND0 272 aa10.02□□□□□ -0.81
HDAC8-202ENST00000373556 A0A0J9YXV3 536 aa10.01□□□□□ -0.81
HDAC8-202ENST00000373556 VCYO14598 125 aa10.01□□□□□ -0.81
HDAC8-202ENST00000373556 PTTG1IPP53801 180 aa10.01□□□□□ -0.81
HDAC8-202ENST00000373556 GAGE2BQ13066 116 aa10.01□□□□□ -0.81
HDAC8-202ENST00000373556 SPINK6Q6UWN8 80 aa10.01□□□□□ -0.81
HDAC8-202ENST00000373556 V9GYV3 84 aa10.01□□□□□ -0.81
HDAC8-202ENST00000373556 C1orf196B1AJZ1 125 aa10□□□□□ -0.81
HDAC8-202ENST00000373556 COX7A2LO14548 114 aa10□□□□□ -0.81
HDAC8-202ENST00000373556 SRP19P09132 144 aaKnown RBP10□□□□□ -0.81
HDAC8-202ENST00000373556 RIGQ13278 110 aa10□□□□□ -0.81
HDAC8-202ENST00000373556 Q6ZRP5 223 aa10□□□□□ -0.81
HDAC8-202ENST00000373556 NRACQ8N912 160 aa10□□□□□ -0.81
HDAC8-202ENST00000373556 NUP35Q8NFH5 326 aa10□□□□□ -0.81
HDAC8-202ENST00000373556 UBE2D4Q9Y2X8 147 aa10□□□□□ -0.81
HDAC8-202ENST00000373556 TRAV13-1A0A0B4J241 112 aa9.99□□□□□ -0.81
HDAC8-202ENST00000373556 LOC107984640A0A0U1RRK4 108 aa9.99□□□□□ -0.81
HDAC8-202ENST00000373556 SUMO2P61956 95 aaKnown RBP9.99□□□□□ -0.81
HDAC8-202ENST00000373556 REG3GQ6UW15 175 aa9.99□□□□□ -0.81
HDAC8-202ENST00000373556 ISOC2Q96AB3 205 aa9.99□□□□□ -0.81
HDAC8-202ENST00000373556 KRTAP10-8P60410 259 aa9.98□□□□□ -0.81
HDAC8-202ENST00000373556 SRSF9Q13242 221 aaKnown RBP eCLIP9.98□□□□□ -0.81
HDAC8-202ENST00000373556 Q6ZUT4 128 aa9.98□□□□□ -0.81
HDAC8-202ENST00000373556 CAMK2N2Q96S95 79 aa9.98□□□□□ -0.81
HDAC8-202ENST00000373556 KIR2DL4Q99706 377 aa9.98□□□□□ -0.81
HDAC8-202ENST00000373556 A0A1W2PNN7 141 aa9.97□□□□□ -0.81
HDAC8-202ENST00000373556 C5orf38Q86SI9 138 aa9.97□□□□□ -0.81
HDAC8-202ENST00000373556 CSDC2Q9Y534 153 aaKnown RBP9.97□□□□□ -0.81
HDAC8-202ENST00000373556 PPP1R17O96001 155 aa9.96□□□□□ -0.82
HDAC8-202ENST00000373556 MRPL51Q4U2R6 128 aaKnown RBP9.96□□□□□ -0.82
HDAC8-202ENST00000373556 NAT8BQ9UHF3 227 aa9.96□□□□□ -0.82
HDAC8-202ENST00000373556 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.95□□□□□ -0.82
HDAC8-202ENST00000373556 APOMO95445 188 aa9.95□□□□□ -0.82
HDAC8-202ENST00000373556 RPL23P62829 140 aaKnown RBP9.95□□□□□ -0.82
HDAC8-202ENST00000373556 RPL18AQ02543 176 aaKnown RBP9.95□□□□□ -0.82
HDAC8-202ENST00000373556 SMAGPQ0VAQ4 97 aa9.95□□□□□ -0.82
HDAC8-202ENST00000373556 TMEM241Q24JQ0 296 aa9.95□□□□□ -0.82
HDAC8-202ENST00000373556 FAM104BQ5XKR9 115 aa9.95□□□□□ -0.82
HDAC8-202ENST00000373556 PPP1R2P9O14990 202 aa9.94□□□□□ -0.82
HDAC8-202ENST00000373556 ADIRFQ15847 76 aa9.94□□□□□ -0.82
HDAC8-202ENST00000373556 C2orf48Q96LS8 159 aa9.94□□□□□ -0.82
HDAC8-202ENST00000373556 OPRPNQ99935 248 aaPredicted RBP9.94□□□□□ -0.82
HDAC8-202ENST00000373556 RPL39P62891 51 aaKnown RBP9.93□□□□□ -0.82
HDAC8-202ENST00000373556 SPAG11BQ08648 103 aa9.93□□□□□ -0.82
HDAC8-202ENST00000373556 FAM74A3Q4VXF1 159 aa9.93□□□□□ -0.82
HDAC8-202ENST00000373556 C9orf116Q5BN46 136 aaPredicted RBP9.93□□□□□ -0.82
HDAC8-202ENST00000373556 TIMM21Q9BVV7 248 aa9.93□□□□□ -0.82
HDAC8-202ENST00000373556 CKS2P33552 79 aa9.92□□□□□ -0.82
HDAC8-202ENST00000373556 PHF5AQ7RTV0 110 aaKnown RBP9.92□□□□□ -0.82
HDAC8-202ENST00000373556 TMEM18Q96B42 140 aa9.92□□□□□ -0.82
HDAC8-202ENST00000373556 PSORS1C2Q9UIG4 136 aa9.92□□□□□ -0.82
HDAC8-202ENST00000373556 SMIM27A0A1W2PRY6 76 aa9.91□□□□□ -0.82
HDAC8-202ENST00000373556 C9JQL5 133 aa9.91□□□□□ -0.82
HDAC8-202ENST00000373556 MT-ND6P03923 174 aa9.91□□□□□ -0.82
HDAC8-202ENST00000373556 FAM104AQ969W3 186 aa9.91□□□□□ -0.82
HDAC8-202ENST00000373556 C20orf78Q9BR46 151 aa9.91□□□□□ -0.82
HDAC8-202ENST00000373556 LINC00862A6NCI5 91 aa9.9□□□□□ -0.82
HDAC8-202ENST00000373556 TNFRSF6BO95407 300 aa9.9□□□□□ -0.82
HDAC8-202ENST00000373556 NAT8Q9UHE5 227 aa9.9□□□□□ -0.82
HDAC8-202ENST00000373556 TRBV24-1A0A075B6N3 115 aa9.89□□□□□ -0.83
HDAC8-202ENST00000373556 SRSF3P84103 164 aaKnown RBP9.89□□□□□ -0.83
HDAC8-202ENST00000373556 OR10D4PQ8NGN7 298 aa9.89□□□□□ -0.83
HDAC8-202ENST00000373556 ORAOV1Q8WV07 137 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms