RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 C10orf91Q5T1B1 145 aa13.79□□□□□ -0.2
TMEM54-202ENST00000373463 OR5A1Q8NGJ0 315 aa13.79□□□□□ -0.2
TMEM54-202ENST00000373463 KIR2DL4Q99706 377 aa13.79□□□□□ -0.2
TMEM54-202ENST00000373463 CDC42SE2Q9NRR3 84 aa13.79□□□□□ -0.2
TMEM54-202ENST00000373463 PHOX2AO14813 284 aa13.78□□□□□ -0.2
TMEM54-202ENST00000373463 TMEM136Q6ZRR5 245 aa13.78□□□□□ -0.2
TMEM54-202ENST00000373463 ORMDL3Q8N138 153 aa13.78□□□□□ -0.2
TMEM54-202ENST00000373463 CHCHD10Q8WYQ3 142 aaPredicted RBP13.78□□□□□ -0.2
TMEM54-202ENST00000373463 BTF3L4Q96K17 158 aa13.78□□□□□ -0.2
TMEM54-202ENST00000373463 UBE2D4Q9Y2X8 147 aa13.78□□□□□ -0.2
TMEM54-202ENST00000373463 C15orf56Q8N910 161 aa13.77□□□□□ -0.21
TMEM54-202ENST00000373463 PRELID3AQ96N28 172 aa13.77□□□□□ -0.21
TMEM54-202ENST00000373463 IMMP2LQ96T52 175 aa13.77□□□□□ -0.21
TMEM54-202ENST00000373463 LINC00959A0A1B0GUT2 108 aa13.76□□□□□ -0.21
TMEM54-202ENST00000373463 ZNF664Q8N3J9 261 aa13.76□□□□□ -0.21
TMEM54-202ENST00000373463 FAM104AQ969W3 186 aa13.76□□□□□ -0.21
TMEM54-202ENST00000373463 TMEM101Q96IK0 257 aa13.76□□□□□ -0.21
TMEM54-202ENST00000373463 CTDSP1Q9GZU7 261 aa13.76□□□□□ -0.21
TMEM54-202ENST00000373463 FAT1Q14517 4588 aa13.76□□□□□ -0.21
TMEM54-202ENST00000373463 SMR3BP02814 79 aaPredicted RBP13.75□□□□□ -0.21
TMEM54-202ENST00000373463 SLPIP03973 132 aa13.75□□□□□ -0.21
TMEM54-202ENST00000373463 FOXI1Q12951 378 aa13.75□□□□□ -0.21
TMEM54-202ENST00000373463 CSDC2Q9Y534 153 aaKnown RBP13.75□□□□□ -0.21
TMEM54-202ENST00000373463 TCAPO15273 167 aa13.74□□□□□ -0.21
TMEM54-202ENST00000373463 RPL39P62891 51 aaKnown RBP13.74□□□□□ -0.21
TMEM54-202ENST00000373463 CARHSP1Q9Y2V2 147 aaKnown RBP13.74□□□□□ -0.21
TMEM54-202ENST00000373463 RNASE13Q5GAN3 156 aaKnown RBP13.73□□□□□ -0.21
TMEM54-202ENST00000373463 DGAT2L7PQ6IED9 249 aa13.73□□□□□ -0.21
TMEM54-202ENST00000373463 Q6ZUT4 128 aa13.73□□□□□ -0.21
TMEM54-202ENST00000373463 CLRN3Q8NCR9 226 aa13.73□□□□□ -0.21
TMEM54-202ENST00000373463 hDV102S1A0JD36 115 aa13.72□□□□□ -0.21
TMEM54-202ENST00000373463 PRSS47A8MTI9 375 aa13.72□□□□□ -0.21
TMEM54-202ENST00000373463 CCL25O15444 150 aa13.72□□□□□ -0.21
TMEM54-202ENST00000373463 C9orf163Q8N9P6 203 aa13.72□□□□□ -0.21
TMEM54-202ENST00000373463 TIMM21Q9BVV7 248 aa13.72□□□□□ -0.21
TMEM54-202ENST00000373463 XCL1P47992 114 aa13.71□□□□□ -0.21
TMEM54-202ENST00000373463 CNBPP62633 177 aaKnown RBP13.7□□□□□ -0.22
TMEM54-202ENST00000373463 SCXQ7RTU7 201 aa13.7□□□□□ -0.22
TMEM54-202ENST00000373463 LAMTOR2Q9Y2Q5 125 aa13.7□□□□□ -0.22
TMEM54-202ENST00000373463 TRAV9-1A0A075B6T8 112 aa13.69□□□□□ -0.22
TMEM54-202ENST00000373463 EPM2AB3EWF7 344 aa13.69□□□□□ -0.22
TMEM54-202ENST00000373463 Q5VSD8 79 aa13.69□□□□□ -0.22
TMEM54-202ENST00000373463 LOC389332A0A1B0GUA5 103 aa13.68□□□□□ -0.22
TMEM54-202ENST00000373463 OPRPNQ99935 248 aaPredicted RBP13.68□□□□□ -0.22
TMEM54-202ENST00000373463 HIGD2BQ4VC39 106 aa13.67□□□□□ -0.22
TMEM54-202ENST00000373463 SDIM1Q6ZPB5 146 aa13.67□□□□□ -0.22
TMEM54-202ENST00000373463 TMEM18Q96B42 140 aa13.67□□□□□ -0.22
TMEM54-202ENST00000373463 CHAC1Q9BUX1 264 aa13.67□□□□□ -0.22
TMEM54-202ENST00000373463 GVQW2A0A096LPI5 108 aaPredicted RBP13.66□□□□□ -0.22
TMEM54-202ENST00000373463 PANO1I0J062 215 aa13.66□□□□□ -0.22
TMEM54-202ENST00000373463 SS18Q15532 418 aa13.66□□□□□ -0.22
TMEM54-202ENST00000373463 MAP1LC3AQ9H492 121 aa13.66□□□□□ -0.22
TMEM54-202ENST00000373463 VPS13BQ7Z7G8 4022 aa13.65□□□□□ -0.22
TMEM54-202ENST00000373463 SMAGPQ0VAQ4 97 aa13.65□□□□□ -0.22
TMEM54-202ENST00000373463 RHEBQ15382 184 aa13.65□□□□□ -0.22
TMEM54-202ENST00000373463 KIAA1644Q3SXP7 199 aa13.65□□□□□ -0.22
TMEM54-202ENST00000373463 CD164L2Q6UWJ8 174 aa13.65□□□□□ -0.22
TMEM54-202ENST00000373463 CIRBP-AS1Q8TBR5 109 aa13.65□□□□□ -0.22
TMEM54-202ENST00000373463 SPANXA1Q9NS26 97 aa13.65□□□□□ -0.22
TMEM54-202ENST00000373463 CFAP161Q6P656 301 aa13.64□□□□□ -0.23
TMEM54-202ENST00000373463 Q8N8P6 123 aa13.64□□□□□ -0.23
TMEM54-202ENST00000373463 RPS10P5Q9NQ39 176 aa13.64□□□□□ -0.23
TMEM54-202ENST00000373463 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.64□□□□□ -0.23
TMEM54-202ENST00000373463 TRAV13-1A0A0B4J241 112 aa13.63□□□□□ -0.23
TMEM54-202ENST00000373463 RAB5AP20339 215 aa13.63□□□□□ -0.23
TMEM54-202ENST00000373463 MRPS36P82909 103 aaKnown RBP13.63□□□□□ -0.23
TMEM54-202ENST00000373463 C1orf196B1AJZ1 125 aa13.62□□□□□ -0.23
TMEM54-202ENST00000373463 S100PP25815 95 aa13.62□□□□□ -0.23
TMEM54-202ENST00000373463 AP5S1Q9NUS5 200 aa13.62□□□□□ -0.23
TMEM54-202ENST00000373463 LINC00526Q96FQ7 95 aa13.61□□□□□ -0.23
TMEM54-202ENST00000373463 GNB1LQ9BYB4 327 aa13.61□□□□□ -0.23
TMEM54-202ENST00000373463 IGHV1-58A0A0C4DH39 117 aa13.6□□□□□ -0.23
TMEM54-202ENST00000373463 PYGO1Q9Y3Y4 419 aa13.6□□□□□ -0.23
TMEM54-202ENST00000373463 IGLV4-3A0A075B6K6 122 aa13.59□□□□□ -0.23
TMEM54-202ENST00000373463 APOC3P02656 99 aa13.59□□□□□ -0.23
TMEM54-202ENST00000373463 IFI27P40305 119 aaPredicted RBP13.59□□□□□ -0.23
TMEM54-202ENST00000373463 LINC00528Q8N1L1 170 aa13.59□□□□□ -0.23
TMEM54-202ENST00000373463 SRRM2Q9UQ35 2752 aaKnown RBP13.58□□□□□ -0.24
TMEM54-202ENST00000373463 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.58□□□□□ -0.24
TMEM54-202ENST00000373463 CIRBPQ14011 172 aaKnown RBP13.58□□□□□ -0.24
TMEM54-202ENST00000373463 IGHV3-64A0A075B6Q5 118 aa13.57□□□□□ -0.24
TMEM54-202ENST00000373463 FAM229AH3BQW9 127 aa13.57□□□□□ -0.24
TMEM54-202ENST00000373463 CHTF8P0CG12 524 aa13.57□□□□□ -0.24
TMEM54-202ENST00000373463 C2orf66Q6UXQ4 117 aa13.57□□□□□ -0.24
TMEM54-202ENST00000373463 ALKBH7Q9BT30 221 aaPredicted RBP13.57□□□□□ -0.24
TMEM54-202ENST00000373463 NXT2Q9NPJ8 142 aaKnown RBP13.57□□□□□ -0.24
TMEM54-202ENST00000373463 COX7A2LO14548 114 aa13.56□□□□□ -0.24
TMEM54-202ENST00000373463 C5orf38Q86SI9 138 aa13.56□□□□□ -0.24
TMEM54-202ENST00000373463 TGIF2-C20orf24A0A0A6YYL0 155 aa13.55□□□□□ -0.24
TMEM54-202ENST00000373463 KRTAP10-4P60372 401 aaPredicted RBP13.55□□□□□ -0.24
TMEM54-202ENST00000373463 ZC2HC1BQ5TFG8 222 aa13.55□□□□□ -0.24
TMEM54-202ENST00000373463 LINC00173Q6ZV60 143 aa13.55□□□□□ -0.24
TMEM54-202ENST00000373463 CYSLTR1Q9Y271 337 aa13.55□□□□□ -0.24
TMEM54-202ENST00000373463 IGHV3OR16-9A0A0B4J2B5 98 aa13.54□□□□□ -0.24
TMEM54-202ENST00000373463 IFITM10A6NMD0 228 aa13.54□□□□□ -0.24
TMEM54-202ENST00000373463 K7EMI3 77 aa13.54□□□□□ -0.24
TMEM54-202ENST00000373463 ORMDL2Q53FV1 153 aa13.54□□□□□ -0.24
TMEM54-202ENST00000373463 PRSS3P2Q8NHM4 247 aa13.54□□□□□ -0.24
TMEM54-202ENST00000373463 MRPL18Q9H0U6 180 aaKnown RBP13.54□□□□□ -0.24
TMEM54-202ENST00000373463 IGIPA6NJ69 53 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms