RNA–Protein interactions for RNA: ENST00000373159.1

TRAPPC3-201, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-201ENST00000373159 OCC1Q8TAD7 63 aa8.06□□□□□ -1.12
TRAPPC3-201ENST00000373159 RNASE7Q9H1E1 156 aaKnown RBP8.06□□□□□ -1.12
TRAPPC3-201ENST00000373159 CDC42SE2Q9NRR3 84 aa8.06□□□□□ -1.12
TRAPPC3-201ENST00000373159 K7EN84 100 aa8.05□□□□□ -1.12
TRAPPC3-201ENST00000373159 BCL2P10415 239 aa8.05□□□□□ -1.12
TRAPPC3-201ENST00000373159 LOC107984640A0A0U1RRK4 108 aa8.04□□□□□ -1.12
TRAPPC3-201ENST00000373159 CAMPP49913 170 aa8.04□□□□□ -1.12
TRAPPC3-201ENST00000373159 MRPL52Q86TS9 123 aaKnown RBP8.04□□□□□ -1.12
TRAPPC3-201ENST00000373159 ISOC2Q96AB3 205 aa8.04□□□□□ -1.12
TRAPPC3-201ENST00000373159 LPAP08519 4548 aa8.04□□□□□ -1.12
TRAPPC3-201ENST00000373159 A0A1W2PNN7 141 aa8.03□□□□□ -1.12
TRAPPC3-201ENST00000373159 TSHBP01222 138 aa8.03□□□□□ -1.12
TRAPPC3-201ENST00000373159 TAGLN2P37802 199 aaKnown RBP8.03□□□□□ -1.12
TRAPPC3-201ENST00000373159 GAGE2BQ13066 116 aa8.03□□□□□ -1.12
TRAPPC3-201ENST00000373159 ZNF664Q8N3J9 261 aa8.03□□□□□ -1.12
TRAPPC3-201ENST00000373159 MRAP2Q96G30 205 aa8.03□□□□□ -1.12
TRAPPC3-201ENST00000373159 ST20Q9HBF5 79 aa8.03□□□□□ -1.12
TRAPPC3-201ENST00000373159 IGLV4-69A0A075B6H9 119 aa8.02□□□□□ -1.13
TRAPPC3-201ENST00000373159 POLR2KP53803 58 aaKnown RBP8.02□□□□□ -1.13
TRAPPC3-201ENST00000373159 TRBV27A0A0K0K1C4 114 aa8.01□□□□□ -1.13
TRAPPC3-201ENST00000373159 A8MWL6 223 aa8.01□□□□□ -1.13
TRAPPC3-201ENST00000373159 C1orf196B1AJZ1 125 aa8.01□□□□□ -1.13
TRAPPC3-201ENST00000373159 NUP35Q8NFH5 326 aa8.01□□□□□ -1.13
TRAPPC3-201ENST00000373159 TMEM242Q9NWH2 141 aa8.01□□□□□ -1.13
TRAPPC3-201ENST00000373159 PSORS1C2Q9UIG4 136 aa8.01□□□□□ -1.13
TRAPPC3-201ENST00000373159 GATCO43716 136 aaKnown RBP8□□□□□ -1.13
TRAPPC3-201ENST00000373159 APOMO95445 188 aa8□□□□□ -1.13
TRAPPC3-201ENST00000373159 MALP21145 153 aa8□□□□□ -1.13
TRAPPC3-201ENST00000373159 C9orf116Q5BN46 136 aaPredicted RBP8□□□□□ -1.13
TRAPPC3-201ENST00000373159 FAM231DQ6ZW35 169 aa8□□□□□ -1.13
TRAPPC3-201ENST00000373159 C2orf48Q96LS8 159 aa8□□□□□ -1.13
TRAPPC3-201ENST00000373159 C7orf77A4D0Y5 90 aa7.99□□□□□ -1.13
TRAPPC3-201ENST00000373159 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.99□□□□□ -1.13
TRAPPC3-201ENST00000373159 COX7A2LO14548 114 aa7.99□□□□□ -1.13
TRAPPC3-201ENST00000373159 MT-ND6P03923 174 aa7.99□□□□□ -1.13
TRAPPC3-201ENST00000373159 CT83Q5H943 113 aa7.99□□□□□ -1.13
TRAPPC3-201ENST00000373159 CAMK2N2Q96S95 79 aa7.99□□□□□ -1.13
TRAPPC3-201ENST00000373159 CSDC2Q9Y534 153 aaKnown RBP7.99□□□□□ -1.13
TRAPPC3-201ENST00000373159 TMEM191AQ9H0A3 160 aa7.98□□□□□ -1.13
TRAPPC3-201ENST00000373159 MUC2Q02817 5179 aa7.98□□□□□ -1.13
TRAPPC3-201ENST00000373159 TMEM250H0YL14 139 aa7.97□□□□□ -1.13
TRAPPC3-201ENST00000373159 VCYO14598 125 aa7.97□□□□□ -1.13
TRAPPC3-201ENST00000373159 RAB4AP20338 218 aa7.97□□□□□ -1.13
TRAPPC3-201ENST00000373159 RNF151Q2KHN1 245 aa7.97□□□□□ -1.13
TRAPPC3-201ENST00000373159 C1orf137Q5JT78 98 aa7.97□□□□□ -1.13
TRAPPC3-201ENST00000373159 BORCS7Q96B45 105 aa7.97□□□□□ -1.13
TRAPPC3-201ENST00000373159 A0A1B0GUT8 65 aa7.96□□□□□ -1.14
TRAPPC3-201ENST00000373159 SMAGPQ0VAQ4 97 aa7.96□□□□□ -1.14
TRAPPC3-201ENST00000373159 PHF5AQ7RTV0 110 aaKnown RBP7.96□□□□□ -1.14
TRAPPC3-201ENST00000373159 SLC51BQ86UW2 128 aa7.96□□□□□ -1.14
TRAPPC3-201ENST00000373159 PRR26Q8N8Z3 221 aa7.95□□□□□ -1.14
TRAPPC3-201ENST00000373159 TSKUQ8WUA8 353 aa7.95□□□□□ -1.14
TRAPPC3-201ENST00000373159 DIRC1Q969H9 104 aa7.95□□□□□ -1.14
TRAPPC3-201ENST00000373159 UBE2D4Q9Y2X8 147 aa7.95□□□□□ -1.14
TRAPPC3-201ENST00000373159 TRAV13-1A0A0B4J241 112 aa7.94□□□□□ -1.14
TRAPPC3-201ENST00000373159 HIGD1CA8MV81 97 aa7.94□□□□□ -1.14
TRAPPC3-201ENST00000373159 PPP1R17O96001 155 aa7.94□□□□□ -1.14
TRAPPC3-201ENST00000373159 IGLV7-43P04211 117 aa7.94□□□□□ -1.14
TRAPPC3-201ENST00000373159 FCER1GP30273 86 aa7.94□□□□□ -1.14
TRAPPC3-201ENST00000373159 RPL18AQ02543 176 aaKnown RBP7.94□□□□□ -1.14
TRAPPC3-201ENST00000373159 C5orf38Q86SI9 138 aa7.94□□□□□ -1.14
TRAPPC3-201ENST00000373159 AMN1Q8IY45 258 aa7.94□□□□□ -1.14
TRAPPC3-201ENST00000373159 OPRPNQ99935 248 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC3-201ENST00000373159 RNASE13Q5GAN3 156 aaKnown RBP7.93□□□□□ -1.14
TRAPPC3-201ENST00000373159 OR10D4PQ8NGN7 298 aa7.93□□□□□ -1.14
TRAPPC3-201ENST00000373159 TIMM21Q9BVV7 248 aa7.93□□□□□ -1.14
TRAPPC3-201ENST00000373159 MRPL35Q9NZE8 188 aaKnown RBP7.93□□□□□ -1.14
TRAPPC3-201ENST00000373159 F8WDY8 70 aa7.92□□□□□ -1.14
TRAPPC3-201ENST00000373159 SUMO2P61956 95 aaKnown RBP7.92□□□□□ -1.14
TRAPPC3-201ENST00000373159 SPAG11BQ08648 103 aa7.92□□□□□ -1.14
TRAPPC3-201ENST00000373159 NRACQ8N912 160 aa7.92□□□□□ -1.14
TRAPPC3-201ENST00000373159 IMMP2LQ96T52 175 aa7.92□□□□□ -1.14
TRAPPC3-201ENST00000373159 KIR2DL4Q99706 377 aa7.92□□□□□ -1.14
TRAPPC3-201ENST00000373159 A0A087WZ39 114 aa7.91□□□□□ -1.14
TRAPPC3-201ENST00000373159 H0Y9J4 135 aa7.91□□□□□ -1.14
TRAPPC3-201ENST00000373159 SMKR1H3BMG3 65 aa7.91□□□□□ -1.14
TRAPPC3-201ENST00000373159 TMEM18Q96B42 140 aa7.91□□□□□ -1.14
TRAPPC3-201ENST00000373159 IGLV1-50A0A075B6I6 118 aa7.9□□□□□ -1.14
TRAPPC3-201ENST00000373159 BLOC1S1P78537 153 aa7.9□□□□□ -1.14
TRAPPC3-201ENST00000373159 RIGQ13278 110 aa7.9□□□□□ -1.14
TRAPPC3-201ENST00000373159 TMEM241Q24JQ0 296 aa7.9□□□□□ -1.14
TRAPPC3-201ENST00000373159 Q6ZUT4 128 aa7.9□□□□□ -1.14
TRAPPC3-201ENST00000373159 LINC01551Q86U37 167 aa7.9□□□□□ -1.14
TRAPPC3-201ENST00000373159 KRTAP11-1Q8IUC1 163 aa7.9□□□□□ -1.14
TRAPPC3-201ENST00000373159 TCTE3Q8IZS6 198 aa7.9□□□□□ -1.14
TRAPPC3-201ENST00000373159 OSTCQ9NRP0 149 aa7.9□□□□□ -1.14
TRAPPC3-201ENST00000373159 IGHV3OR16-9A0A0B4J2B5 98 aa7.89□□□□□ -1.15
TRAPPC3-201ENST00000373159 PPP1R2P9O14990 202 aa7.89□□□□□ -1.15
TRAPPC3-201ENST00000373159 TLX1NBP0CAT3 122 aa7.89□□□□□ -1.15
TRAPPC3-201ENST00000373159 FAM168BA1KXE4 195 aa7.88□□□□□ -1.15
TRAPPC3-201ENST00000373159 NDUFA1O15239 70 aa7.88□□□□□ -1.15
TRAPPC3-201ENST00000373159 KRTAP1-4P0C5Y4 121 aa7.88□□□□□ -1.15
TRAPPC3-201ENST00000373159 CEBPGP53567 150 aa7.88□□□□□ -1.15
TRAPPC3-201ENST00000373159 ORAOV1Q8WV07 137 aa7.88□□□□□ -1.15
TRAPPC3-201ENST00000373159 FAM104AQ969W3 186 aa7.88□□□□□ -1.15
TRAPPC3-201ENST00000373159 SMIM7Q9BQ49 75 aa7.88□□□□□ -1.15
TRAPPC3-201ENST00000373159 C20orf78Q9BR46 151 aa7.88□□□□□ -1.15
TRAPPC3-201ENST00000373159 TRBV24-1A0A075B6N3 115 aa7.87□□□□□ -1.15
TRAPPC3-201ENST00000373159 RPL32P62910 135 aaKnown RBP7.87□□□□□ -1.15
TRAPPC3-201ENST00000373159 C10orf25Q5T742 122 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms