RNA–Protein interactions for RNA: ENST00000369937.4

CUEDC2-201, Transcript of CUE domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC2, Length 1,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-201ENST00000369937 OXTP01178 125 aa13.04□□□□□ -0.32
CUEDC2-201ENST00000369937 POLR2KP53803 58 aaKnown RBP13.04□□□□□ -0.32
CUEDC2-201ENST00000369937 RPL23P62829 140 aaKnown RBP13.04□□□□□ -0.32
CUEDC2-201ENST00000369937 SS18Q15532 418 aa13.04□□□□□ -0.32
CUEDC2-201ENST00000369937 SMAGPQ0VAQ4 97 aa13.03□□□□□ -0.32
CUEDC2-201ENST00000369937 CIRBPQ14011 172 aaKnown RBP13.03□□□□□ -0.32
CUEDC2-201ENST00000369937 KIR2DL4Q99706 377 aa13.03□□□□□ -0.32
CUEDC2-201ENST00000369937 LINC00959A0A1B0GUT2 108 aa13.02□□□□□ -0.33
CUEDC2-201ENST00000369937 SMKR1H3BMG3 65 aa13.02□□□□□ -0.33
CUEDC2-201ENST00000369937 CCL25O15444 150 aa13.02□□□□□ -0.33
CUEDC2-201ENST00000369937 FOXI1Q12951 378 aa13.02□□□□□ -0.33
CUEDC2-201ENST00000369937 A0A087WYN8 130 aa13.01□□□□□ -0.33
CUEDC2-201ENST00000369937 GVQW2A0A096LPI5 108 aaPredicted RBP13.01□□□□□ -0.33
CUEDC2-201ENST00000369937 CHTF8P0CG12 524 aa13.01□□□□□ -0.33
CUEDC2-201ENST00000369937 COX6A2Q02221 97 aa13.01□□□□□ -0.33
CUEDC2-201ENST00000369937 MRPL52Q86TS9 123 aaKnown RBP13.01□□□□□ -0.33
CUEDC2-201ENST00000369937 ZNF664Q8N3J9 261 aa13.01□□□□□ -0.33
CUEDC2-201ENST00000369937 CDC42SE2Q9NRR3 84 aa13.01□□□□□ -0.33
CUEDC2-201ENST00000369937 PPP1R2P9O14990 202 aa13□□□□□ -0.33
CUEDC2-201ENST00000369937 SUMO2P61956 95 aaKnown RBP13□□□□□ -0.33
CUEDC2-201ENST00000369937 SPACA4Q8TDM5 124 aa13□□□□□ -0.33
CUEDC2-201ENST00000369937 SMDT1Q9H4I9 107 aa13□□□□□ -0.33
CUEDC2-201ENST00000369937 IGHV1-58A0A0C4DH39 117 aa12.99□□□□□ -0.33
CUEDC2-201ENST00000369937 A0A1B0GW15 77 aa12.99□□□□□ -0.33
CUEDC2-201ENST00000369937 CAMPP49913 170 aa12.99□□□□□ -0.33
CUEDC2-201ENST00000369937 PKIGQ9Y2B9 76 aa12.99□□□□□ -0.33
CUEDC2-201ENST00000369937 IGKV2-24A0A0C4DH68 120 aa12.97□□□□□ -0.33
CUEDC2-201ENST00000369937 SMIM27A0A1W2PRY6 76 aa12.97□□□□□ -0.33
CUEDC2-201ENST00000369937 C9JQL5 133 aa12.97□□□□□ -0.33
CUEDC2-201ENST00000369937 MAJINQ3KP22 176 aa12.97□□□□□ -0.33
CUEDC2-201ENST00000369937 FAM104BQ5XKR9 115 aa12.97□□□□□ -0.33
CUEDC2-201ENST00000369937 CD164L2Q6UWJ8 174 aa12.97□□□□□ -0.33
CUEDC2-201ENST00000369937 C7orf33Q8WU49 177 aa12.97□□□□□ -0.33
CUEDC2-201ENST00000369937 TMEM18Q96B42 140 aa12.97□□□□□ -0.33
CUEDC2-201ENST00000369937 LINC00862A6NCI5 91 aa12.96□□□□□ -0.33
CUEDC2-201ENST00000369937 ZNF561-AS1K7EIQ3 104 aa12.96□□□□□ -0.33
CUEDC2-201ENST00000369937 S100A8P05109 93 aa12.96□□□□□ -0.33
CUEDC2-201ENST00000369937 CKS2P33552 79 aa12.96□□□□□ -0.33
CUEDC2-201ENST00000369937 SRSF3P84103 164 aaKnown RBP12.96□□□□□ -0.33
CUEDC2-201ENST00000369937 MRPL51Q4U2R6 128 aaKnown RBP12.96□□□□□ -0.33
CUEDC2-201ENST00000369937 NRACQ8N912 160 aa12.96□□□□□ -0.33
CUEDC2-201ENST00000369937 PRSS3P2Q8NHM4 247 aa12.96□□□□□ -0.33
CUEDC2-201ENST00000369937 C1orf196B1AJZ1 125 aa12.95□□□□□ -0.34
CUEDC2-201ENST00000369937 MALP21145 153 aa12.95□□□□□ -0.34
CUEDC2-201ENST00000369937 SERTAD4-AS1Q5TG53 156 aa12.95□□□□□ -0.34
CUEDC2-201ENST00000369937 PLAC8Q9NZF1 115 aa12.95□□□□□ -0.34
CUEDC2-201ENST00000369937 F8W036 122 aa12.94□□□□□ -0.34
CUEDC2-201ENST00000369937 C20orf78Q9BR46 151 aa12.94□□□□□ -0.34
CUEDC2-201ENST00000369937 CSDC2Q9Y534 153 aaKnown RBP12.94□□□□□ -0.34
CUEDC2-201ENST00000369937 TCAPO15273 167 aa12.93□□□□□ -0.34
CUEDC2-201ENST00000369937 HNRNPA3P51991 378 aaKnown RBP12.93□□□□□ -0.34
CUEDC2-201ENST00000369937 CARD19Q96LW7 228 aa12.93□□□□□ -0.34
CUEDC2-201ENST00000369937 LINC00474Q9P2X8 69 aa12.93□□□□□ -0.34
CUEDC2-201ENST00000369937 UBE2D4Q9Y2X8 147 aa12.93□□□□□ -0.34
CUEDC2-201ENST00000369937 HBBP68871 147 aa12.92□□□□□ -0.34
CUEDC2-201ENST00000369937 MRPL54Q6P161 138 aaKnown RBP12.92□□□□□ -0.34
CUEDC2-201ENST00000369937 STPG4Q8N801 248 aa12.92□□□□□ -0.34
CUEDC2-201ENST00000369937 LINC00526Q96FQ7 95 aa12.92□□□□□ -0.34
CUEDC2-201ENST00000369937 COX7A2LO14548 114 aa12.91□□□□□ -0.34
CUEDC2-201ENST00000369937 LRP1Q07954 4544 aaKnown RBP12.9□□□□□ -0.34
CUEDC2-201ENST00000369937 TRBV24-1A0A075B6N3 115 aa12.9□□□□□ -0.34
CUEDC2-201ENST00000369937 TRAV13-1A0A0B4J241 112 aa12.9□□□□□ -0.34
CUEDC2-201ENST00000369937 PHOX2AO14813 284 aa12.9□□□□□ -0.34
CUEDC2-201ENST00000369937 TNFRSF6BO95407 300 aa12.9□□□□□ -0.34
CUEDC2-201ENST00000369937 SYCNQ0VAF6 134 aa12.9□□□□□ -0.34
CUEDC2-201ENST00000369937 RNASE13Q5GAN3 156 aaKnown RBP12.9□□□□□ -0.34
CUEDC2-201ENST00000369937 Q6ZRU5 148 aa12.9□□□□□ -0.34
CUEDC2-201ENST00000369937 A0A096LNI7 61 aa12.89□□□□□ -0.35
CUEDC2-201ENST00000369937 TIMM21Q9BVV7 248 aa12.89□□□□□ -0.35
CUEDC2-201ENST00000369937 D6R8Y8 96 aa12.88□□□□□ -0.35
CUEDC2-201ENST00000369937 RPL32P62910 135 aaKnown RBP12.88□□□□□ -0.35
CUEDC2-201ENST00000369937 APOMO95445 188 aa12.87□□□□□ -0.35
CUEDC2-201ENST00000369937 PPBPP02775 128 aa12.87□□□□□ -0.35
CUEDC2-201ENST00000369937 Q6ZUT4 128 aa12.87□□□□□ -0.35
CUEDC2-201ENST00000369937 SMIM2Q9BVW6 85 aa12.87□□□□□ -0.35
CUEDC2-201ENST00000369937 FAT3Q8TDW7 4589 aa12.87□□□□□ -0.35
CUEDC2-201ENST00000369937 IGLV4-69A0A075B6H9 119 aa12.85□□□□□ -0.35
CUEDC2-201ENST00000369937 CAMK2N2Q96S95 79 aa12.85□□□□□ -0.35
CUEDC2-201ENST00000369937 PKHD1L1Q86WI1 4243 aa12.84□□□□□ -0.35
CUEDC2-201ENST00000369937 A0A1B0GXF2 115 aa12.84□□□□□ -0.35
CUEDC2-201ENST00000369937 RAB14P61106 215 aa12.84□□□□□ -0.35
CUEDC2-201ENST00000369937 ATP5L2Q7Z4Y8 100 aa12.84□□□□□ -0.35
CUEDC2-201ENST00000369937 C5orf38Q86SI9 138 aa12.84□□□□□ -0.35
CUEDC2-201ENST00000369937 SPANXA1Q9NS26 97 aa12.84□□□□□ -0.35
CUEDC2-201ENST00000369937 LOC107984640A0A0U1RRK4 108 aa12.83□□□□□ -0.36
CUEDC2-201ENST00000369937 NPYP01303 97 aa12.83□□□□□ -0.36
CUEDC2-201ENST00000369937 RAB5AP20339 215 aa12.83□□□□□ -0.36
CUEDC2-201ENST00000369937 RPL39P62891 51 aaKnown RBP12.83□□□□□ -0.36
CUEDC2-201ENST00000369937 ORMDL3Q8N138 153 aa12.83□□□□□ -0.36
CUEDC2-201ENST00000369937 GAGE2BQ13066 116 aa12.82□□□□□ -0.36
CUEDC2-201ENST00000369937 TMEM136Q6ZRR5 245 aa12.82□□□□□ -0.36
CUEDC2-201ENST00000369937 PRR3P79522 188 aaKnown RBP12.8□□□□□ -0.36
CUEDC2-201ENST00000369937 PNRC1Q12796 327 aaPredicted RBP12.8□□□□□ -0.36
CUEDC2-201ENST00000369937 C2orf48Q96LS8 159 aa12.8□□□□□ -0.36
CUEDC2-201ENST00000369937 PRELID3AQ96N28 172 aa12.8□□□□□ -0.36
CUEDC2-201ENST00000369937 PTTG1IPP53801 180 aa12.79□□□□□ -0.36
CUEDC2-201ENST00000369937 SPAG11BQ08648 103 aa12.79□□□□□ -0.36
CUEDC2-201ENST00000369937 PLA2G2DQ9UNK4 145 aa12.79□□□□□ -0.36
CUEDC2-201ENST00000369937 IFITM10A6NMD0 228 aa12.78□□□□□ -0.36
CUEDC2-201ENST00000369937 MT-ND4LP03901 98 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms