RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 SS18Q15532 418 aa9.4□□□□□ -0.9
CTSD-202ENST00000367196 MAJINQ3KP22 176 aa9.4□□□□□ -0.9
CTSD-202ENST00000367196 LINC01551Q86U37 167 aa9.4□□□□□ -0.9
CTSD-202ENST00000367196 IGHV1-58A0A0C4DH39 117 aa9.39□□□□□ -0.91
CTSD-202ENST00000367196 IGKV2-24A0A0C4DH68 120 aa9.39□□□□□ -0.91
CTSD-202ENST00000367196 LINC00959A0A1B0GUT2 108 aa9.39□□□□□ -0.91
CTSD-202ENST00000367196 C7orf77A4D0Y5 90 aa9.39□□□□□ -0.91
CTSD-202ENST00000367196 ZNF727A8MUV8 499 aa9.39□□□□□ -0.91
CTSD-202ENST00000367196 ESDP10768 282 aa9.39□□□□□ -0.91
CTSD-202ENST00000367196 MRPL52Q86TS9 123 aaKnown RBP9.39□□□□□ -0.91
CTSD-202ENST00000367196 OSTCQ9NRP0 149 aa9.39□□□□□ -0.91
CTSD-202ENST00000367196 TMEM242Q9NWH2 141 aa9.39□□□□□ -0.91
CTSD-202ENST00000367196 TRBV27A0A0K0K1C4 114 aa9.38□□□□□ -0.91
CTSD-202ENST00000367196 PHOX2AO14813 284 aa9.38□□□□□ -0.91
CTSD-202ENST00000367196 CCL25O15444 150 aa9.38□□□□□ -0.91
CTSD-202ENST00000367196 TSHBP01222 138 aa9.38□□□□□ -0.91
CTSD-202ENST00000367196 FCER1GP30273 86 aa9.37□□□□□ -0.91
CTSD-202ENST00000367196 POLR2KP53803 58 aaKnown RBP9.37□□□□□ -0.91
CTSD-202ENST00000367196 RIGQ13278 110 aa9.37□□□□□ -0.91
CTSD-202ENST00000367196 CD164L2Q6UWJ8 174 aa9.37□□□□□ -0.91
CTSD-202ENST00000367196 STPG4Q8N801 248 aa9.37□□□□□ -0.91
CTSD-202ENST00000367196 PRSS3P2Q8NHM4 247 aa9.37□□□□□ -0.91
CTSD-202ENST00000367196 HMCN2Q8NDA2 5059 aa9.37□□□□□ -0.91
CTSD-202ENST00000367196 ZNF561-AS1K7EIQ3 104 aa9.36□□□□□ -0.91
CTSD-202ENST00000367196 RAB4AP20338 218 aa9.36□□□□□ -0.91
CTSD-202ENST00000367196 ZNF664Q8N3J9 261 aa9.36□□□□□ -0.91
CTSD-202ENST00000367196 ISOC2Q96AB3 205 aa9.36□□□□□ -0.91
CTSD-202ENST00000367196 CARD19Q96LW7 228 aa9.36□□□□□ -0.91
CTSD-202ENST00000367196 CDC42SE2Q9NRR3 84 aa9.36□□□□□ -0.91
CTSD-202ENST00000367196 VCYO14598 125 aa9.35□□□□□ -0.91
CTSD-202ENST00000367196 PPP1R2P9O14990 202 aa9.35□□□□□ -0.91
CTSD-202ENST00000367196 AMN1Q8IY45 258 aa9.35□□□□□ -0.91
CTSD-202ENST00000367196 KIR2DL4Q99706 377 aa9.35□□□□□ -0.91
CTSD-202ENST00000367196 NAT8BQ9UHF3 227 aa9.35□□□□□ -0.91
CTSD-202ENST00000367196 A0A096LNI7 61 aa9.34□□□□□ -0.91
CTSD-202ENST00000367196 LINC00862A6NCI5 91 aa9.34□□□□□ -0.91
CTSD-202ENST00000367196 PRR3P79522 188 aaKnown RBP9.34□□□□□ -0.91
CTSD-202ENST00000367196 NDUFA5Q16718 116 aa9.34□□□□□ -0.91
CTSD-202ENST00000367196 FAM74A3Q4VXF1 159 aa9.34□□□□□ -0.91
CTSD-202ENST00000367196 COMMD7Q86VX2 200 aa9.34□□□□□ -0.91
CTSD-202ENST00000367196 TMEM18Q96B42 140 aa9.34□□□□□ -0.91
CTSD-202ENST00000367196 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
CTSD-202ENST00000367196 C1orf196B1AJZ1 125 aa9.33□□□□□ -0.92
CTSD-202ENST00000367196 GAS8-AS1O95177 125 aa9.33□□□□□ -0.92
CTSD-202ENST00000367196 MT1HL1P0DM35 61 aa9.33□□□□□ -0.92
CTSD-202ENST00000367196 MALP21145 153 aa9.33□□□□□ -0.92
CTSD-202ENST00000367196 SUMO2P61956 95 aaKnown RBP9.33□□□□□ -0.92
CTSD-202ENST00000367196 SYCNQ0VAF6 134 aa9.33□□□□□ -0.92
CTSD-202ENST00000367196 V9GYV3 84 aa9.33□□□□□ -0.92
CTSD-202ENST00000367196 TCAPO15273 167 aa9.32□□□□□ -0.92
CTSD-202ENST00000367196 SRP19P09132 144 aaKnown RBP9.32□□□□□ -0.92
CTSD-202ENST00000367196 CAMPP49913 170 aa9.32□□□□□ -0.92
CTSD-202ENST00000367196 TMEM241Q24JQ0 296 aa9.32□□□□□ -0.92
CTSD-202ENST00000367196 NUP35Q8NFH5 326 aa9.32□□□□□ -0.92
CTSD-202ENST00000367196 A0A1B0GW15 77 aa9.31□□□□□ -0.92
CTSD-202ENST00000367196 COX7A2LO14548 114 aa9.31□□□□□ -0.92
CTSD-202ENST00000367196 PEA15Q15121 130 aa9.3□□□□□ -0.92
CTSD-202ENST00000367196 LINC00526Q96FQ7 95 aa9.3□□□□□ -0.92
CTSD-202ENST00000367196 UBE2D4Q9Y2X8 147 aa9.3□□□□□ -0.92
CTSD-202ENST00000367196 LOC107984640A0A0U1RRK4 108 aa9.29□□□□□ -0.92
CTSD-202ENST00000367196 SMKR1H3BMG3 65 aa9.29□□□□□ -0.92
CTSD-202ENST00000367196 APOMO95445 188 aa9.29□□□□□ -0.92
CTSD-202ENST00000367196 ADIRFQ15847 76 aa9.29□□□□□ -0.92
CTSD-202ENST00000367196 UQCC3Q6UW78 93 aa9.29□□□□□ -0.92
CTSD-202ENST00000367196 NRACQ8N912 160 aa9.29□□□□□ -0.92
CTSD-202ENST00000367196 C20orf78Q9BR46 151 aa9.29□□□□□ -0.92
CTSD-202ENST00000367196 TIMM21Q9BVV7 248 aa9.29□□□□□ -0.92
CTSD-202ENST00000367196 SMDT1Q9H4I9 107 aa9.29□□□□□ -0.92
CTSD-202ENST00000367196 NAT8Q9UHE5 227 aa9.29□□□□□ -0.92
CTSD-202ENST00000367196 IGLV4-69A0A075B6H9 119 aa9.28□□□□□ -0.92
CTSD-202ENST00000367196 S100A8P05109 93 aa9.28□□□□□ -0.92
CTSD-202ENST00000367196 RPL23P62829 140 aaKnown RBP9.28□□□□□ -0.92
CTSD-202ENST00000367196 FAM104BQ5XKR9 115 aa9.28□□□□□ -0.92
CTSD-202ENST00000367196 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
CTSD-202ENST00000367196 SPINK6Q6UWN8 80 aa9.28□□□□□ -0.92
CTSD-202ENST00000367196 Q6ZRP5 223 aa9.28□□□□□ -0.92
CTSD-202ENST00000367196 CAMK2N2Q96S95 79 aa9.28□□□□□ -0.92
CTSD-202ENST00000367196 TRAV13-1A0A0B4J241 112 aa9.27□□□□□ -0.93
CTSD-202ENST00000367196 CKS2P33552 79 aa9.27□□□□□ -0.93
CTSD-202ENST00000367196 PTTG1IPP53801 180 aa9.27□□□□□ -0.93
CTSD-202ENST00000367196 RPL32P62910 135 aaKnown RBP9.27□□□□□ -0.93
CTSD-202ENST00000367196 MRPL51Q4U2R6 128 aaKnown RBP9.27□□□□□ -0.93
CTSD-202ENST00000367196 SLC7A5P1Q8MH63 180 aa9.27□□□□□ -0.93
CTSD-202ENST00000367196 C2orf48Q96LS8 159 aa9.27□□□□□ -0.93
CTSD-202ENST00000367196 LINC01600Q96MT4 127 aa9.27□□□□□ -0.93
CTSD-202ENST00000367196 TRBV24-1A0A075B6N3 115 aa9.26□□□□□ -0.93
CTSD-202ENST00000367196 SMIM27A0A1W2PRY6 76 aa9.26□□□□□ -0.93
CTSD-202ENST00000367196 F8W036 122 aa9.26□□□□□ -0.93
CTSD-202ENST00000367196 SRSF3P84103 164 aaKnown RBP9.26□□□□□ -0.93
CTSD-202ENST00000367196 GAGE2BQ13066 116 aa9.26□□□□□ -0.93
CTSD-202ENST00000367196 RNASE13Q5GAN3 156 aaKnown RBP9.25□□□□□ -0.93
CTSD-202ENST00000367196 Q6ZUT4 128 aa9.25□□□□□ -0.93
CTSD-202ENST00000367196 OR10D4PQ8NGN7 298 aa9.25□□□□□ -0.93
CTSD-202ENST00000367196 SPANXA1Q9NS26 97 aa9.24□□□□□ -0.93
CTSD-202ENST00000367196 UBR4Q5T4S7 5183 aa9.23□□□□□ -0.93
CTSD-202ENST00000367196 HBBP68871 147 aa9.23□□□□□ -0.93
CTSD-202ENST00000367196 SPAG11BQ08648 103 aa9.23□□□□□ -0.93
CTSD-202ENST00000367196 SMIM2Q9BVW6 85 aa9.23□□□□□ -0.93
CTSD-202ENST00000367196 A0A0J9YXV3 536 aa9.22□□□□□ -0.93
CTSD-202ENST00000367196 C9JQL5 133 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 231.7 ms