RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 NMNAT1Q9HAN9 279 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 CDC42SE2Q9NRR3 84 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 RPRMQ9NS64 109 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 CRIPTQ9P021 101 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 CDKN2A-AS1Q9UH64 79 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 ARHGEF12Q9NZN5 1544 aa-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 TCOF1Q13428 1488 aaKnown RBP-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 NUP210Q8TEM1 1887 aaPredicted RBP-2.09□□□□□ -2.74
RNU6-54P-201ENST00000365563 CENPFP49454 3210 aa-2.1□□□□□ -2.74
RNU6-54P-201ENST00000365563 MYH1P12882 1939 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 FGF7P21781 194 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 CRYGSP22914 178 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 PPP1R2P41236 205 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 HSPE1P61604 102 aaKnown RBP-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 B2MP61769 119 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 RPS29P62273 56 aaKnown RBP-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 BTG2P78543 158 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 TMED2Q15363 201 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 WFDC13Q8IUB5 93 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 FAM9CQ8IZT9 166 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 WFDC9Q8NEX5 89 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 PAIP2Q9BPZ3 127 aaKnown RBP-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 CHMP4BQ9H444 224 aaKnown RBP-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 METTL1Q9UBP6 276 aaKnown RBP-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 GUCA1BQ9UMX6 200 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 CCDC141Q6ZP82 1450 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 TECPR2O15040 1411 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 PPIP5K1Q6PFW1 1433 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 PSME4Q14997 1843 aa-2.1□□□□□ -2.75
RNU6-54P-201ENST00000365563 MAGI2Q86UL8 1455 aa-2.11□□□□□ -2.75
RNU6-54P-201ENST00000365563 A6NIN4 97 aa-2.11□□□□□ -2.75
RNU6-54P-201ENST00000365563 TMEM114B3SHH9 223 aa-2.11□□□□□ -2.75
RNU6-54P-201ENST00000365563 G3V2T6 193 aa-2.11□□□□□ -2.75
RNU6-54P-201ENST00000365563 APOC3P02656 99 aa-2.11□□□□□ -2.75
RNU6-54P-201ENST00000365563 RPL7L1Q6DKI1 246 aaKnown RBP-2.11□□□□□ -2.75
RNU6-54P-201ENST00000365563 ZNF818PQ6ZRF7 136 aa-2.11□□□□□ -2.75
RNU6-54P-201ENST00000365563 ATP6V0E2Q8NHE4 81 aa-2.11□□□□□ -2.75
RNU6-54P-201ENST00000365563 SSR3Q9UNL2 185 aa-2.11□□□□□ -2.75
RNU6-54P-201ENST00000365563 NOP16Q9Y3C1 178 aaKnown RBP-2.11□□□□□ -2.75
RNU6-54P-201ENST00000365563 YTHDC2Q9H6S0 1430 aaKnown RBP-2.11□□□□□ -2.75
RNU6-54P-201ENST00000365563 UHRF1BP1LA0JNW5 1464 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 BORCS7-ASMTA0A0B4J1R7 106 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 CCL22O00626 93 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 UQCRQO14949 82 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 UQCR11O14957 56 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 HIST1H1BP16401 226 aaKnown RBP-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 HSD11B1P28845 292 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 CRYBA4P53673 196 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 TPPP2P59282 170 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 Q6AWC8 147 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 DCUN1D2Q6PH85 259 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 BAGE2Q86Y30 109 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 STX12Q86Y82 276 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 SLC35B3Q9H1N7 401 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 AGPAT3Q9NRZ7 376 aa-2.12□□□□□ -2.75
RNU6-54P-201ENST00000365563 CST2P09228 141 aa-2.13□□□□□ -2.75
RNU6-54P-201ENST00000365563 GNG5P63218 68 aa-2.13□□□□□ -2.75
RNU6-54P-201ENST00000365563 ATP11AUNQ6ZP68 121 aa-2.13□□□□□ -2.75
RNU6-54P-201ENST00000365563 STX19Q8N4C7 294 aa-2.13□□□□□ -2.75
RNU6-54P-201ENST00000365563 SIKE1Q9BRV8 207 aa-2.13□□□□□ -2.75
RNU6-54P-201ENST00000365563 HIGD1BQ9P298 99 aa-2.13□□□□□ -2.75
RNU6-54P-201ENST00000365563 FAM32AQ9Y421 112 aaKnown RBP-2.13□□□□□ -2.75
RNU6-54P-201ENST00000365563 LINC00312Q9Y6C7 94 aa-2.13□□□□□ -2.75
RNU6-54P-201ENST00000365563 ALKQ9UM73 1620 aa-2.13□□□□□ -2.75
RNU6-54P-201ENST00000365563 NKTRP30414 1462 aaKnown RBP-2.14□□□□□ -2.75
RNU6-54P-201ENST00000365563 DNAH12Q6ZR08 3092 aa-2.14□□□□□ -2.75
RNU6-54P-201ENST00000365563 TRBV7-3A0A075B6L6 115 aa-2.14□□□□□ -2.75
RNU6-54P-201ENST00000365563 SPAARA0A1B0GVQ0 90 aa-2.14□□□□□ -2.75
RNU6-54P-201ENST00000365563 H7BZZ5 65 aa-2.14□□□□□ -2.75
RNU6-54P-201ENST00000365563 J3QLW9 94 aa-2.14□□□□□ -2.75
RNU6-54P-201ENST00000365563 MAGOHP61326 146 aaKnown RBP-2.14□□□□□ -2.75
RNU6-54P-201ENST00000365563 TMEM263Q8WUH6 116 aaKnown RBP-2.14□□□□□ -2.75
RNU6-54P-201ENST00000365563 C10orf82Q8WW14 230 aa-2.14□□□□□ -2.75
RNU6-54P-201ENST00000365563 CTNNBIP1Q9NSA3 81 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-54P-201ENST00000365563 PRNDQ9UKY0 176 aa-2.14□□□□□ -2.75
RNU6-54P-201ENST00000365563 V9GYH0 126 aa-2.14□□□□□ -2.75
RNU6-54P-201ENST00000365563 MYH7P12883 1935 aa-2.15□□□□□ -2.75
RNU6-54P-201ENST00000365563 ASPMQ8IZT6 3477 aa-2.15□□□□□ -2.75
RNU6-54P-201ENST00000365563 ASXL1Q8IXJ9 1541 aa-2.15□□□□□ -2.75
RNU6-54P-201ENST00000365563 GABARAPH6UMI1 98 aa-2.15□□□□□ -2.75
RNU6-54P-201ENST00000365563 YKT6O15498 198 aa-2.15□□□□□ -2.75
RNU6-54P-201ENST00000365563 LIN52Q52LA3 116 aa-2.15□□□□□ -2.75
RNU6-54P-201ENST00000365563 Q6ZUT4 128 aa-2.15□□□□□ -2.75
RNU6-54P-201ENST00000365563 SH3BGRL3Q9H299 93 aa-2.15□□□□□ -2.75
RNU6-54P-201ENST00000365563 LYRM2Q9NU23 88 aaPredicted RBP-2.15□□□□□ -2.75
RNU6-54P-201ENST00000365563 PXDNQ92626 1479 aa-2.15□□□□□ -2.75
RNU6-54P-201ENST00000365563 ADGBQ8N7X0 1667 aa-2.15□□□□□ -2.75
RNU6-54P-201ENST00000365563 TRBV7-6A0A0J9YX20 115 aa-2.16□□□□□ -2.76
RNU6-54P-201ENST00000365563 TRDV1A0A1B0GX56 115 aa-2.16□□□□□ -2.76
RNU6-54P-201ENST00000365563 CETN3O15182 167 aa-2.16□□□□□ -2.76
RNU6-54P-201ENST00000365563 RBP4P02753 201 aa-2.16□□□□□ -2.76
RNU6-54P-201ENST00000365563 SLC25A5P05141 298 aaKnown RBP-2.16□□□□□ -2.76
RNU6-54P-201ENST00000365563 S100A9P06702 114 aaKnown RBP-2.16□□□□□ -2.76
RNU6-54P-201ENST00000365563 SPANXN1Q5VSR9 72 aa-2.16□□□□□ -2.76
RNU6-54P-201ENST00000365563 FDCSPQ8NFU4 85 aa-2.16□□□□□ -2.76
RNU6-54P-201ENST00000365563 LAMTOR2Q9Y2Q5 125 aa-2.16□□□□□ -2.76
RNU6-54P-201ENST00000365563 CCDC144AA2RUR9 1427 aa-2.17□□□□□ -2.76
RNU6-54P-201ENST00000365563 MAP3K5Q99683 1374 aa-2.17□□□□□ -2.76
RNU6-54P-201ENST00000365563 ERICH2A1L162 156 aa-2.17□□□□□ -2.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms