RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 LINC00315P59091 139 aa9.38□□□□□ -0.91
VAMP1-201ENST00000361716 LINC00643Q86TS7 51 aa9.38□□□□□ -0.91
VAMP1-201ENST00000361716 FLNBO75369 2602 aaKnown RBP9.38□□□□□ -0.91
VAMP1-201ENST00000361716 TRBV7-7A0A0K0K1E9 115 aa9.38□□□□□ -0.91
VAMP1-201ENST00000361716 C11orf44Q8N8P7 122 aa9.38□□□□□ -0.91
VAMP1-201ENST00000361716 PEMTQ9UBM1 199 aa9.37□□□□□ -0.91
VAMP1-201ENST00000361716 ANKRD17O75179 2603 aaKnown RBP9.37□□□□□ -0.91
VAMP1-201ENST00000361716 TRBV27A0A0K0K1C4 114 aa9.37□□□□□ -0.91
VAMP1-201ENST00000361716 EBI3Q14213 229 aa9.37□□□□□ -0.91
VAMP1-201ENST00000361716 MRPL53Q96EL3 112 aaKnown RBP9.37□□□□□ -0.91
VAMP1-201ENST00000361716 Q9H8V8 135 aa9.37□□□□□ -0.91
VAMP1-201ENST00000361716 NBPF19A0A087WUL8 3843 aa9.37□□□□□ -0.91
VAMP1-201ENST00000361716 TINCRA0A1B0GVN0 87 aa9.37□□□□□ -0.91
VAMP1-201ENST00000361716 KIF25-AS1Q9Y6Z4 181 aa9.37□□□□□ -0.91
VAMP1-201ENST00000361716 IGHV1-58A0A0C4DH39 117 aa9.36□□□□□ -0.91
VAMP1-201ENST00000361716 RNASE1P07998 156 aaKnown RBP9.36□□□□□ -0.91
VAMP1-201ENST00000361716 TIRAPP58753 221 aa9.36□□□□□ -0.91
VAMP1-201ENST00000361716 LINC00526Q96FQ7 95 aa9.36□□□□□ -0.91
VAMP1-201ENST00000361716 M0QY20 66 aa9.36□□□□□ -0.91
VAMP1-201ENST00000361716 COX7CP15954 63 aa9.36□□□□□ -0.91
VAMP1-201ENST00000361716 SNRPD3P62318 126 aaKnown RBP9.36□□□□□ -0.91
VAMP1-201ENST00000361716 IGHV4OR15-8A0A075B7B6 117 aa9.35□□□□□ -0.91
VAMP1-201ENST00000361716 A0A087WW49 117 aa9.35□□□□□ -0.91
VAMP1-201ENST00000361716 LENEPQ9Y5L5 61 aa9.35□□□□□ -0.91
VAMP1-201ENST00000361716 FAM240AA0A1B0GVK7 77 aa9.35□□□□□ -0.91
VAMP1-201ENST00000361716 C4orf26Q17RF5 130 aa9.35□□□□□ -0.91
VAMP1-201ENST00000361716 C14orf132Q9NPU4 83 aa9.35□□□□□ -0.91
VAMP1-201ENST00000361716 Q8N2B8 174 aa9.35□□□□□ -0.91
VAMP1-201ENST00000361716 Q9UF83 564 aa9.35□□□□□ -0.91
VAMP1-201ENST00000361716 CDKN2A-AS1Q9UH64 79 aa9.35□□□□□ -0.91
VAMP1-201ENST00000361716 IGHV4-61A0A0C4DH41 118 aa9.34□□□□□ -0.91
VAMP1-201ENST00000361716 IGHV3-53P01767 116 aa9.34□□□□□ -0.91
VAMP1-201ENST00000361716 ITLN2Q8WWU7 325 aaPredicted RBP9.34□□□□□ -0.91
VAMP1-201ENST00000361716 BBC3Q96PG8 261 aaPredicted RBP9.34□□□□□ -0.91
VAMP1-201ENST00000361716 CYSTM1Q9H1C7 97 aa9.34□□□□□ -0.91
VAMP1-201ENST00000361716 NDUFA4O00483 81 aa9.34□□□□□ -0.91
VAMP1-201ENST00000361716 IGHV1-69P01742 117 aa9.34□□□□□ -0.91
VAMP1-201ENST00000361716 DEFB136Q30KP8 78 aa9.34□□□□□ -0.91
VAMP1-201ENST00000361716 PRIMA1Q86XR5 153 aa9.34□□□□□ -0.91
VAMP1-201ENST00000361716 TOMM7Q9P0U1 55 aa9.34□□□□□ -0.91
VAMP1-201ENST00000361716 C19orf84I3L1E1 186 aa9.34□□□□□ -0.91
VAMP1-201ENST00000361716 ACYP1P07311 99 aa9.34□□□□□ -0.91
VAMP1-201ENST00000361716 C10orf105Q8TEF2 133 aa9.34□□□□□ -0.91
VAMP1-201ENST00000361716 LITAFQ99732 161 aa9.34□□□□□ -0.91
VAMP1-201ENST00000361716 VSIG2Q96IQ7 327 aa9.33□□□□□ -0.92
VAMP1-201ENST00000361716 FAM223BA6NKX1 122 aa9.33□□□□□ -0.92
VAMP1-201ENST00000361716 LMO4P61968 165 aa9.33□□□□□ -0.92
VAMP1-201ENST00000361716 PIK3CD-AS1Q5SR53 167 aa9.33□□□□□ -0.92
VAMP1-201ENST00000361716 FAM223AQ8IWN6 122 aa9.33□□□□□ -0.92
VAMP1-201ENST00000361716 ITPR2Q14571 2701 aa9.32□□□□□ -0.92
VAMP1-201ENST00000361716 PRORYQ9H606 182 aa9.32□□□□□ -0.92
VAMP1-201ENST00000361716 TENM4Q6N022 2769 aa9.32□□□□□ -0.92
VAMP1-201ENST00000361716 ATP5G1P05496 136 aa9.32□□□□□ -0.92
VAMP1-201ENST00000361716 LRRC75A-AS1Q8N1F1 130 aa9.31□□□□□ -0.92
VAMP1-201ENST00000361716 WFDC9Q8NEX5 89 aa9.31□□□□□ -0.92
VAMP1-201ENST00000361716 ATOX1O00244 68 aa9.31□□□□□ -0.92
VAMP1-201ENST00000361716 COX7A2LO14548 114 aa9.31□□□□□ -0.92
VAMP1-201ENST00000361716 DEFB131AP59861 70 aa9.31□□□□□ -0.92
VAMP1-201ENST00000361716 CITED2Q99967 270 aaPredicted RBP9.31□□□□□ -0.92
VAMP1-201ENST00000361716 IGHV1OR15-1A0A075B7D0 117 aa9.3□□□□□ -0.92
VAMP1-201ENST00000361716 GCN1Q92616 2671 aaKnown RBP9.3□□□□□ -0.92
VAMP1-201ENST00000361716 UBE2E2Q96LR5 201 aa9.3□□□□□ -0.92
VAMP1-201ENST00000361716 IMUPQ9GZP8 106 aa9.3□□□□□ -0.92
VAMP1-201ENST00000361716 F5H768 121 aa9.3□□□□□ -0.92
VAMP1-201ENST00000361716 LINC00308Q8TCZ7 52 aa9.3□□□□□ -0.92
VAMP1-201ENST00000361716 IGHV4-59P01825 116 aa9.3□□□□□ -0.92
VAMP1-201ENST00000361716 C11orf71Q6IPW1 123 aa9.3□□□□□ -0.92
VAMP1-201ENST00000361716 FBN2P35556 2912 aa9.29□□□□□ -0.92
VAMP1-201ENST00000361716 MED14OSP0DP75 135 aa9.29□□□□□ -0.92
VAMP1-201ENST00000361716 CCL19Q99731 98 aa9.29□□□□□ -0.92
VAMP1-201ENST00000361716 SPANXDQ9BXN6 97 aa9.29□□□□□ -0.92
VAMP1-201ENST00000361716 SPANXCQ9NY87 97 aa9.29□□□□□ -0.92
VAMP1-201ENST00000361716 SLPIP03973 132 aa9.28□□□□□ -0.92
VAMP1-201ENST00000361716 FAM218AQ96MZ4 157 aa9.28□□□□□ -0.92
VAMP1-201ENST00000361716 PIMREGQ9BSJ6 248 aa9.28□□□□□ -0.92
VAMP1-201ENST00000361716 INAFM2P0DMQ5 153 aa9.28□□□□□ -0.92
VAMP1-201ENST00000361716 U3KQE9 123 aa9.28□□□□□ -0.92
VAMP1-201ENST00000361716 DCANP1Q8TF63 244 aa9.28□□□□□ -0.92
VAMP1-201ENST00000361716 A0A0J9YX75 114 aa9.27□□□□□ -0.92
VAMP1-201ENST00000361716 A0A1W2PRX2 142 aa9.27□□□□□ -0.92
VAMP1-201ENST00000361716 USMG5Q96IX5 58 aa9.27□□□□□ -0.92
VAMP1-201ENST00000361716 LINC00467Q9BRT7 94 aa9.27□□□□□ -0.92
VAMP1-201ENST00000361716 HIST2H2BCQ6DN03 193 aa9.27□□□□□ -0.93
VAMP1-201ENST00000361716 C11orf68Q9H3H3 251 aaKnown RBP9.27□□□□□ -0.93
VAMP1-201ENST00000361716 TRAV23DV6A0A075B6W5 121 aa9.26□□□□□ -0.93
VAMP1-201ENST00000361716 TRBV6-5A0A0K0K1A5 114 aa9.26□□□□□ -0.93
VAMP1-201ENST00000361716 MRPS36P82909 103 aaKnown RBP9.26□□□□□ -0.93
VAMP1-201ENST00000361716 APRG1Q8IVJ8 170 aa9.26□□□□□ -0.93
VAMP1-201ENST00000361716 XCL2Q9UBD3 114 aa9.26□□□□□ -0.93
VAMP1-201ENST00000361716 TEX15Q9BXT5 2789 aa9.26□□□□□ -0.93
VAMP1-201ENST00000361716 IGHV4-30-2A0A087WSY4 118 aa9.26□□□□□ -0.93
VAMP1-201ENST00000361716 NCR3O14931 201 aa9.26□□□□□ -0.93
VAMP1-201ENST00000361716 MALP21145 153 aa9.26□□□□□ -0.93
VAMP1-201ENST00000361716 NBEAL2Q6ZNJ1 2754 aa9.26□□□□□ -0.93
VAMP1-201ENST00000361716 NF1P21359 2839 aa9.26□□□□□ -0.93
VAMP1-201ENST00000361716 CRPP02741 224 aa9.25□□□□□ -0.93
VAMP1-201ENST00000361716 RPL18AQ02543 176 aaKnown RBP9.25□□□□□ -0.93
VAMP1-201ENST00000361716 CFHR3Q02985 330 aa9.25□□□□□ -0.93
VAMP1-201ENST00000361716 COX6A2Q02221 97 aa9.25□□□□□ -0.93
VAMP1-201ENST00000361716 DPH3Q96FX2 82 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms