RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.45□□□□□ -0.9
CCDC197-201ENST00000359253 LOC100131303A0A0U1RQF7 123 aa9.45□□□□□ -0.9
CCDC197-201ENST00000359253 IGKV2-29A2NJV5 120 aaPredicted RBP9.45□□□□□ -0.9
CCDC197-201ENST00000359253 MRPL23Q16540 153 aaKnown RBP9.45□□□□□ -0.9
CCDC197-201ENST00000359253 ZC2HC1BQ5TFG8 222 aa9.45□□□□□ -0.9
CCDC197-201ENST00000359253 TMEM101Q96IK0 257 aa9.45□□□□□ -0.9
CCDC197-201ENST00000359253 LINC00587B1AMM8 73 aa9.44□□□□□ -0.9
CCDC197-201ENST00000359253 F5H768 121 aa9.44□□□□□ -0.9
CCDC197-201ENST00000359253 FGF6P10767 208 aa9.44□□□□□ -0.9
CCDC197-201ENST00000359253 HERVK_113P61574 105 aa9.44□□□□□ -0.9
CCDC197-201ENST00000359253 SEC11AP67812 179 aa9.44□□□□□ -0.9
CCDC197-201ENST00000359253 C12orf74Q32Q52 190 aa9.44□□□□□ -0.9
CCDC197-201ENST00000359253 STPG4Q8N801 248 aa9.44□□□□□ -0.9
CCDC197-201ENST00000359253 C14orf144Q96I85 54 aa9.44□□□□□ -0.9
CCDC197-201ENST00000359253 MRPS16Q9Y3D3 137 aaKnown RBP9.44□□□□□ -0.9
CCDC197-201ENST00000359253 IGLV4-69A0A075B6H9 119 aa9.43□□□□□ -0.9
CCDC197-201ENST00000359253 C11orf86A6NJI1 115 aa9.43□□□□□ -0.9
CCDC197-201ENST00000359253 SIVA1O15304 175 aa9.43□□□□□ -0.9
CCDC197-201ENST00000359253 HNRNPA3P51991 378 aaKnown RBP9.43□□□□□ -0.9
CCDC197-201ENST00000359253 ANKRD39Q53RE8 183 aa9.43□□□□□ -0.9
CCDC197-201ENST00000359253 AMMECR1LQ6DCA0 310 aa9.43□□□□□ -0.9
CCDC197-201ENST00000359253 OR5A1Q8NGJ0 315 aa9.43□□□□□ -0.9
CCDC197-201ENST00000359253 VSIG2Q96IQ7 327 aa9.43□□□□□ -0.9
CCDC197-201ENST00000359253 TINCRA0A1B0GVN0 87 aa9.42□□□□□ -0.9
CCDC197-201ENST00000359253 FAM19A3Q7Z5A8 133 aa9.42□□□□□ -0.9
CCDC197-201ENST00000359253 BOD1L2Q8IYS8 172 aa9.42□□□□□ -0.9
CCDC197-201ENST00000359253 RETNQ9HD89 108 aa9.42□□□□□ -0.9
CCDC197-201ENST00000359253 ICOSQ9Y6W8 199 aa9.42□□□□□ -0.9
CCDC197-201ENST00000359253 E9PLD3 99 aa9.41□□□□□ -0.9
CCDC197-201ENST00000359253 TIRAPP58753 221 aa9.41□□□□□ -0.9
CCDC197-201ENST00000359253 FAM104AQ969W3 186 aa9.41□□□□□ -0.9
CCDC197-201ENST00000359253 OPRPNQ99935 248 aaPredicted RBP9.41□□□□□ -0.9
CCDC197-201ENST00000359253 CDC42SE2Q9NRR3 84 aa9.41□□□□□ -0.9
CCDC197-201ENST00000359253 TGP01266 2768 aa9.41□□□□□ -0.9
CCDC197-201ENST00000359253 DNAH9Q9NYC9 4486 aa9.41□□□□□ -0.9
CCDC197-201ENST00000359253 A0A1B0GUV1 79 aa9.4□□□□□ -0.9
CCDC197-201ENST00000359253 LBHQ53QV2 105 aaPredicted RBP9.4□□□□□ -0.9
CCDC197-201ENST00000359253 C11orf45Q8TAV5 145 aa9.4□□□□□ -0.9
CCDC197-201ENST00000359253 CHCHD5Q9BSY4 110 aa9.4□□□□□ -0.9
CCDC197-201ENST00000359253 A0A0J9YWU9 116 aa9.39□□□□□ -0.91
CCDC197-201ENST00000359253 NMUP48645 174 aa9.39□□□□□ -0.91
CCDC197-201ENST00000359253 UBE2D1P51668 147 aa9.39□□□□□ -0.91
CCDC197-201ENST00000359253 CEMP1Q6PRD7 247 aaPredicted RBP9.39□□□□□ -0.91
CCDC197-201ENST00000359253 Q6ZUT4 128 aa9.39□□□□□ -0.91
CCDC197-201ENST00000359253 CHAC1Q9BUX1 264 aa9.39□□□□□ -0.91
CCDC197-201ENST00000359253 A0A0J9YY99 117 aa9.38□□□□□ -0.91
CCDC197-201ENST00000359253 M0R143 59 aa9.38□□□□□ -0.91
CCDC197-201ENST00000359253 CCL25O15444 150 aa9.38□□□□□ -0.91
CCDC197-201ENST00000359253 HTN3P15516 51 aa9.38□□□□□ -0.91
CCDC197-201ENST00000359253 HERVK_113P63121 156 aa9.38□□□□□ -0.91
CCDC197-201ENST00000359253 TMEM170BQ5T4T1 132 aa9.38□□□□□ -0.91
CCDC197-201ENST00000359253 A0A0J9YXV3 536 aa9.37□□□□□ -0.91
CCDC197-201ENST00000359253 H3BRM9 83 aa9.37□□□□□ -0.91
CCDC197-201ENST00000359253 LELP1Q5T871 98 aa9.37□□□□□ -0.91
CCDC197-201ENST00000359253 GEMIN7Q9H840 131 aaKnown RBP9.37□□□□□ -0.91
CCDC197-201ENST00000359253 HIGD1BQ9P298 99 aa9.37□□□□□ -0.91
CCDC197-201ENST00000359253 COL7A1Q02388 2944 aa9.37□□□□□ -0.91
CCDC197-201ENST00000359253 IGLV5-45A0A087WSX0 123 aa9.36□□□□□ -0.91
CCDC197-201ENST00000359253 TMEM223A0PJW6 202 aa9.36□□□□□ -0.91
CCDC197-201ENST00000359253 ZNF22P17026 224 aaPredicted RBP9.36□□□□□ -0.91
CCDC197-201ENST00000359253 CTAG1AP78358 180 aa9.36□□□□□ -0.91
CCDC197-201ENST00000359253 GAGE6Q13070 117 aa9.36□□□□□ -0.91
CCDC197-201ENST00000359253 PLEKHB2Q96CS7 222 aa9.36□□□□□ -0.91
CCDC197-201ENST00000359253 WWC2-AS2Q96NR7 200 aa9.36□□□□□ -0.91
CCDC197-201ENST00000359253 A0A096LPF7 62 aa9.35□□□□□ -0.91
CCDC197-201ENST00000359253 IGKV2D-26A0A0A0MRZ7 120 aa9.35□□□□□ -0.91
CCDC197-201ENST00000359253 Q6ZTC4 211 aa9.35□□□□□ -0.91
CCDC197-201ENST00000359253 DEFB131BA0A096LNP1 70 aa9.34□□□□□ -0.91
CCDC197-201ENST00000359253 TRAV10A0A0B4J240 114 aa9.34□□□□□ -0.91
CCDC197-201ENST00000359253 LEPROTO15243 131 aa9.34□□□□□ -0.91
CCDC197-201ENST00000359253 PCP2Q8IVA1 136 aa9.34□□□□□ -0.91
CCDC197-201ENST00000359253 NBEAL2Q6ZNJ1 2754 aa9.34□□□□□ -0.91
CCDC197-201ENST00000359253 TRAV8-6A0A0B4J262 113 aa9.33□□□□□ -0.92
CCDC197-201ENST00000359253 MYMXA0A1B0GTQ4 84 aa9.33□□□□□ -0.92
CCDC197-201ENST00000359253 TMEM262E9PQX1 116 aa9.33□□□□□ -0.92
CCDC197-201ENST00000359253 IGHV1-58A0A0C4DH39 117 aa9.32□□□□□ -0.92
CCDC197-201ENST00000359253 NANOS2P60321 138 aaKnown RBP9.32□□□□□ -0.92
CCDC197-201ENST00000359253 RNASE13Q5GAN3 156 aaKnown RBP9.32□□□□□ -0.92
CCDC197-201ENST00000359253 LINC00242Q5T6M2 205 aa9.32□□□□□ -0.92
CCDC197-201ENST00000359253 LINC00469Q8N7U9 141 aa9.32□□□□□ -0.92
CCDC197-201ENST00000359253 C15orf53Q8NAA6 179 aa9.32□□□□□ -0.92
CCDC197-201ENST00000359253 J3QQQ9 107 aa9.31□□□□□ -0.92
CCDC197-201ENST00000359253 LGALS3P17931 250 aaKnown RBP9.31□□□□□ -0.92
CCDC197-201ENST00000359253 RBX1P62877 108 aa9.31□□□□□ -0.92
CCDC197-201ENST00000359253 TAL2Q16559 108 aa9.31□□□□□ -0.92
CCDC197-201ENST00000359253 LYPD5Q6UWN5 251 aa9.31□□□□□ -0.92
CCDC197-201ENST00000359253 C2orf91Q6ZV80 131 aa9.31□□□□□ -0.92
CCDC197-201ENST00000359253 HUWE1Q7Z6Z7 4374 aaKnown RBP9.31□□□□□ -0.92
CCDC197-201ENST00000359253 IGLV4-60A0A075B6I1 120 aa9.3□□□□□ -0.92
CCDC197-201ENST00000359253 TRAV13-1A0A0B4J241 112 aa9.3□□□□□ -0.92
CCDC197-201ENST00000359253 HSD52Q0P140 79 aa9.3□□□□□ -0.92
CCDC197-201ENST00000359253 SNHG12Q9BXW3 62 aa9.3□□□□□ -0.92
CCDC197-201ENST00000359253 ZNF815PA8K554 130 aa9.29□□□□□ -0.92
CCDC197-201ENST00000359253 TCTAP57738 103 aa9.29□□□□□ -0.92
CCDC197-201ENST00000359253 SS18Q15532 418 aa9.29□□□□□ -0.92
CCDC197-201ENST00000359253 LINC01561Q8N1V8 128 aa9.29□□□□□ -0.92
CCDC197-201ENST00000359253 MAPKAPK5-AS1Q8N8E1 139 aa9.29□□□□□ -0.92
CCDC197-201ENST00000359253 C3orf84H3BNL1 204 aa9.28□□□□□ -0.92
CCDC197-201ENST00000359253 IGHV3-30-3P0DP02 117 aa9.28□□□□□ -0.92
CCDC197-201ENST00000359253 MPV17L2Q567V2 206 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms