RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 FAM19A1Q7Z5A9 133 aa5.5□□□□□ -1.53
CCR9-201ENST00000355983 C5orf56Q8N8D9 126 aa5.5□□□□□ -1.53
CCR9-201ENST00000355983 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.5□□□□□ -1.53
CCR9-201ENST00000355983 A0A1W2PRX2 142 aa5.5□□□□□ -1.53
CCR9-201ENST00000355983 TMEM256-PLSCR3K7ERE1 68 aa5.5□□□□□ -1.53
CCR9-201ENST00000355983 HOXD3P31249 432 aaPredicted RBP5.5□□□□□ -1.53
CCR9-201ENST00000355983 RNASE13Q5GAN3 156 aaKnown RBP5.5□□□□□ -1.53
CCR9-201ENST00000355983 RHPN1-AS1Q9BWJ2 59 aa5.5□□□□□ -1.53
CCR9-201ENST00000355983 SND1-IT1Q9HBX3 110 aa5.5□□□□□ -1.53
CCR9-201ENST00000355983 LECT2O14960 151 aa5.49□□□□□ -1.53
CCR9-201ENST00000355983 WFDC11Q8NEX6 87 aa5.49□□□□□ -1.53
CCR9-201ENST00000355983 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.49□□□□□ -1.53
CCR9-201ENST00000355983 IGHV3-53P01767 116 aa5.49□□□□□ -1.53
CCR9-201ENST00000355983 CXCL6P80162 114 aa5.49□□□□□ -1.53
CCR9-201ENST00000355983 PRR15Q8IV56 129 aa5.49□□□□□ -1.53
CCR9-201ENST00000355983 BRK1Q8WUW1 75 aa5.49□□□□□ -1.53
CCR9-201ENST00000355983 CEP290O15078 2479 aa5.48□□□□□ -1.53
CCR9-201ENST00000355983 CUL9Q8IWT3 2517 aa5.48□□□□□ -1.53
CCR9-201ENST00000355983 PRUNE2Q8WUY3 3088 aa5.48□□□□□ -1.53
CCR9-201ENST00000355983 ABCA4P78363 2273 aa5.48□□□□□ -1.53
CCR9-201ENST00000355983 LOC110117498A0A087WWA1 95 aa5.48□□□□□ -1.53
CCR9-201ENST00000355983 F8WEM9 126 aa5.48□□□□□ -1.53
CCR9-201ENST00000355983 LYNX1G3V0Z9 82 aa5.48□□□□□ -1.53
CCR9-201ENST00000355983 LYNX1P0DP58 116 aa5.48□□□□□ -1.53
CCR9-201ENST00000355983 RBM3P98179 157 aaKnown RBP5.48□□□□□ -1.53
CCR9-201ENST00000355983 DGAT2L7PQ6IED9 249 aa5.48□□□□□ -1.53
CCR9-201ENST00000355983 WNK2Q9Y3S1 2297 aa5.47□□□□□ -1.53
CCR9-201ENST00000355983 TRBV7-4A0A0J9YYF1 115 aa5.47□□□□□ -1.53
CCR9-201ENST00000355983 PLAC8L1A1L4L8 177 aa5.47□□□□□ -1.53
CCR9-201ENST00000355983 A8MTW9 85 aa5.47□□□□□ -1.53
CCR9-201ENST00000355983 H3BQ85 93 aa5.47□□□□□ -1.53
CCR9-201ENST00000355983 RPL36AP83881 106 aaKnown RBP5.47□□□□□ -1.53
CCR9-201ENST00000355983 Q6ZRU5 148 aa5.47□□□□□ -1.53
CCR9-201ENST00000355983 Q8NA96 180 aa5.47□□□□□ -1.53
CCR9-201ENST00000355983 RPL36ALQ969Q0 106 aaKnown RBP5.47□□□□□ -1.53
CCR9-201ENST00000355983 MOB4Q9Y3A3 225 aa5.47□□□□□ -1.53
CCR9-201ENST00000355983 A0A0U1RRA0 63 aa5.46□□□□□ -1.54
CCR9-201ENST00000355983 PDE6GP18545 87 aa5.46□□□□□ -1.54
CCR9-201ENST00000355983 CDSNQ15517 529 aa5.46□□□□□ -1.54
CCR9-201ENST00000355983 FREM2Q5SZK8 3169 aa5.46□□□□□ -1.54
CCR9-201ENST00000355983 TRBV6-4A0A1B0GX49 114 aa5.46□□□□□ -1.54
CCR9-201ENST00000355983 NBL1P41271 181 aa5.46□□□□□ -1.54
CCR9-201ENST00000355983 SNRPD3P62318 126 aaKnown RBP5.46□□□□□ -1.54
CCR9-201ENST00000355983 MIFP14174 115 aa5.45□□□□□ -1.54
CCR9-201ENST00000355983 CCL18P55774 89 aa5.45□□□□□ -1.54
CCR9-201ENST00000355983 COX7B2Q8TF08 81 aa5.45□□□□□ -1.54
CCR9-201ENST00000355983 RMI2Q96E14 147 aa5.45□□□□□ -1.54
CCR9-201ENST00000355983 LINC00474Q9P2X8 69 aa5.45□□□□□ -1.54
CCR9-201ENST00000355983 IGHV3-38A0A0C4DH36 116 aa5.44□□□□□ -1.54
CCR9-201ENST00000355983 K7EQD1 137 aa5.44□□□□□ -1.54
CCR9-201ENST00000355983 K7EQG2 157 aa5.44□□□□□ -1.54
CCR9-201ENST00000355983 Q6ZQT0 140 aa5.44□□□□□ -1.54
CCR9-201ENST00000355983 Q8N814 137 aa5.44□□□□□ -1.54
CCR9-201ENST00000355983 C11orf72Q8NBR9 251 aa5.44□□□□□ -1.54
CCR9-201ENST00000355983 WFDC9Q8NEX5 89 aa5.44□□□□□ -1.54
CCR9-201ENST00000355983 TRIOBPQ9H2D6 2365 aa5.44□□□□□ -1.54
CCR9-201ENST00000355983 DSPP15924 2871 aaKnown RBP5.44□□□□□ -1.54
CCR9-201ENST00000355983 LINC01547P58512 204 aaPredicted RBP5.44□□□□□ -1.54
CCR9-201ENST00000355983 PMAIP1Q13794 54 aa5.44□□□□□ -1.54
CCR9-201ENST00000355983 CDC42SE2Q9NRR3 84 aa5.44□□□□□ -1.54
CCR9-201ENST00000355983 CFAP47Q6ZTR5 3102 aa5.44□□□□□ -1.54
CCR9-201ENST00000355983 C9orf66Q5T8R8 295 aa5.43□□□□□ -1.54
CCR9-201ENST00000355983 DYNLRB2Q8TF09 96 aa5.43□□□□□ -1.54
CCR9-201ENST00000355983 IGHV4-38-2P0DP08 117 aa5.43□□□□□ -1.54
CCR9-201ENST00000355983 PROK1P58294 105 aa5.43□□□□□ -1.54
CCR9-201ENST00000355983 ESRGQ1W209 222 aa5.43□□□□□ -1.54
CCR9-201ENST00000355983 TRBV10-1A0A0K0K1A3 114 aa5.42□□□□□ -1.54
CCR9-201ENST00000355983 Q6ZSN1 163 aa5.42□□□□□ -1.54
CCR9-201ENST00000355983 C6orf223Q8N319 242 aa5.42□□□□□ -1.54
CCR9-201ENST00000355983 A0A0U1RQV1 116 aa5.42□□□□□ -1.54
CCR9-201ENST00000355983 ZNF561-AS1K7EIQ3 104 aa5.42□□□□□ -1.54
CCR9-201ENST00000355983 SAA4P35542 130 aa5.42□□□□□ -1.54
CCR9-201ENST00000355983 SPINK13Q1W4C9 94 aa5.42□□□□□ -1.54
CCR9-201ENST00000355983 DEFB109BQ30KR1 87 aa5.42□□□□□ -1.54
CCR9-201ENST00000355983 Q96MF0 132 aa5.42□□□□□ -1.54
CCR9-201ENST00000355983 SNURFQ9Y675 71 aa5.42□□□□□ -1.54
CCR9-201ENST00000355983 TRAV10A0A0B4J240 114 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 IGLV1-40P01703 118 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 SLPIP03973 132 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 PLA2G2CQ5R387 149 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 LINC01560Q8TB33 94 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 CCL21O00585 134 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 CD164Q04900 197 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 C11orf44Q8N8P7 122 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 TECTAO75443 2155 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 POLEQ07864 2286 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 KALRNO60229 2985 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 IGHV3-73A0A0B4J1V6 119 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 LINC00158P58513 81 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 Q6ZVQ6 151 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 IL17DQ8TAD2 202 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 TMEM254Q8TBM7 123 aa5.41□□□□□ -1.54
CCR9-201ENST00000355983 ZFP36P26651 326 aaKnown RBP5.4□□□□□ -1.54
CCR9-201ENST00000355983 Q1T7F1 81 aa5.4□□□□□ -1.54
CCR9-201ENST00000355983 ARRDC1-AS1Q9H2J1 176 aa5.4□□□□□ -1.54
CCR9-201ENST00000355983 PKDREJQ9NTG1 2253 aa5.4□□□□□ -1.55
CCR9-201ENST00000355983 IGKV3-7A0A075B6H7 116 aa5.4□□□□□ -1.55
CCR9-201ENST00000355983 C11orf71Q6IPW1 123 aa5.4□□□□□ -1.55
CCR9-201ENST00000355983 Q9UF83 564 aa5.4□□□□□ -1.55
CCR9-201ENST00000355983 LMO4P61968 165 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms