RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 BLOC1S1P78537 153 aa10.56□□□□□ -0.72
SMN1-201ENST00000351205 LRP2P98164 4655 aa10.56□□□□□ -0.72
SMN1-201ENST00000351205 C4orf48Q5BLP8 95 aa10.56□□□□□ -0.72
SMN1-201ENST00000351205 BORCS7Q96B45 105 aa10.56□□□□□ -0.72
SMN1-201ENST00000351205 MRAP2Q96G30 205 aa10.56□□□□□ -0.72
SMN1-201ENST00000351205 IGHV1-58A0A0C4DH39 117 aa10.55□□□□□ -0.72
SMN1-201ENST00000351205 A0A1B0GUT8 65 aa10.55□□□□□ -0.72
SMN1-201ENST00000351205 HIGD1CA8MV81 97 aa10.55□□□□□ -0.72
SMN1-201ENST00000351205 TMEM191AQ9H0A3 160 aa10.55□□□□□ -0.72
SMN1-201ENST00000351205 POLR2KP53803 58 aaKnown RBP10.54□□□□□ -0.72
SMN1-201ENST00000351205 MRPL52Q86TS9 123 aaKnown RBP10.54□□□□□ -0.72
SMN1-201ENST00000351205 LINC01551Q86U37 167 aa10.54□□□□□ -0.72
SMN1-201ENST00000351205 TSKUQ8WUA8 353 aa10.54□□□□□ -0.72
SMN1-201ENST00000351205 CARD19Q96LW7 228 aa10.54□□□□□ -0.72
SMN1-201ENST00000351205 CDC42SE2Q9NRR3 84 aa10.54□□□□□ -0.72
SMN1-201ENST00000351205 TRBV27A0A0K0K1C4 114 aa10.53□□□□□ -0.72
SMN1-201ENST00000351205 RAB4AP20338 218 aa10.53□□□□□ -0.72
SMN1-201ENST00000351205 SS18Q15532 418 aa10.53□□□□□ -0.72
SMN1-201ENST00000351205 CD164L2Q6UWJ8 174 aa10.53□□□□□ -0.72
SMN1-201ENST00000351205 FAM210AQ96ND0 272 aa10.53□□□□□ -0.72
SMN1-201ENST00000351205 SMIM7Q9BQ49 75 aa10.53□□□□□ -0.72
SMN1-201ENST00000351205 LINC00474Q9P2X8 69 aa10.53□□□□□ -0.72
SMN1-201ENST00000351205 C7orf77A4D0Y5 90 aa10.52□□□□□ -0.73
SMN1-201ENST00000351205 AKAP14Q86UN6 197 aa10.52□□□□□ -0.73
SMN1-201ENST00000351205 AMN1Q8IY45 258 aa10.52□□□□□ -0.73
SMN1-201ENST00000351205 ZNF664Q8N3J9 261 aa10.52□□□□□ -0.73
SMN1-201ENST00000351205 LINC01600Q96MT4 127 aa10.52□□□□□ -0.73
SMN1-201ENST00000351205 PKIGQ9Y2B9 76 aa10.52□□□□□ -0.73
SMN1-201ENST00000351205 ZNF561-AS1K7EIQ3 104 aa10.51□□□□□ -0.73
SMN1-201ENST00000351205 EIF5A2Q9GZV4 153 aaKnown RBP10.51□□□□□ -0.73
SMN1-201ENST00000351205 SMKR1H3BMG3 65 aa10.5□□□□□ -0.73
SMN1-201ENST00000351205 SYCNQ0VAF6 134 aa10.5□□□□□ -0.73
SMN1-201ENST00000351205 OSTCQ9NRP0 149 aa10.5□□□□□ -0.73
SMN1-201ENST00000351205 ZNF727A8MUV8 499 aa10.49□□□□□ -0.73
SMN1-201ENST00000351205 ODF1Q14990 250 aa10.49□□□□□ -0.73
SMN1-201ENST00000351205 VCYO14598 125 aa10.48□□□□□ -0.73
SMN1-201ENST00000351205 CAMPP49913 170 aa10.48□□□□□ -0.73
SMN1-201ENST00000351205 NRACQ8N912 160 aa10.48□□□□□ -0.73
SMN1-201ENST00000351205 IGLV4-69A0A075B6H9 119 aa10.47□□□□□ -0.73
SMN1-201ENST00000351205 C1orf196B1AJZ1 125 aa10.47□□□□□ -0.73
SMN1-201ENST00000351205 SRP19P09132 144 aaKnown RBP10.47□□□□□ -0.73
SMN1-201ENST00000351205 FCER1GP30273 86 aa10.47□□□□□ -0.73
SMN1-201ENST00000351205 PTTG1IPP53801 180 aa10.47□□□□□ -0.73
SMN1-201ENST00000351205 RNASE13Q5GAN3 156 aaKnown RBP10.47□□□□□ -0.73
SMN1-201ENST00000351205 SPINK6Q6UWN8 80 aa10.47□□□□□ -0.73
SMN1-201ENST00000351205 NUP35Q8NFH5 326 aa10.47□□□□□ -0.73
SMN1-201ENST00000351205 V9GYV3 84 aa10.47□□□□□ -0.73
SMN1-201ENST00000351205 hCG_2014768A0A024R1R8 64 aa10.46□□□□□ -0.73
SMN1-201ENST00000351205 A0A0J9YXV3 536 aa10.46□□□□□ -0.73
SMN1-201ENST00000351205 COX7A2LO14548 114 aa10.46□□□□□ -0.73
SMN1-201ENST00000351205 MALP21145 153 aa10.46□□□□□ -0.73
SMN1-201ENST00000351205 SUMO2P61956 95 aaKnown RBP10.46□□□□□ -0.73
SMN1-201ENST00000351205 RIGQ13278 110 aa10.46□□□□□ -0.73
SMN1-201ENST00000351205 Q6ZRP5 223 aa10.46□□□□□ -0.73
SMN1-201ENST00000351205 ISOC2Q96AB3 205 aa10.46□□□□□ -0.73
SMN1-201ENST00000351205 UBE2D4Q9Y2X8 147 aa10.46□□□□□ -0.73
SMN1-201ENST00000351205 CSDC2Q9Y534 153 aaKnown RBP10.46□□□□□ -0.73
SMN1-201ENST00000351205 GAGE2BQ13066 116 aa10.45□□□□□ -0.74
SMN1-201ENST00000351205 TRAV13-1A0A0B4J241 112 aa10.44□□□□□ -0.74
SMN1-201ENST00000351205 LOC107984640A0A0U1RRK4 108 aa10.44□□□□□ -0.74
SMN1-201ENST00000351205 PPP1R17O96001 155 aa10.44□□□□□ -0.74
SMN1-201ENST00000351205 SRSF9Q13242 221 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMN1-201ENST00000351205 REG3GQ6UW15 175 aa10.44□□□□□ -0.74
SMN1-201ENST00000351205 KIR2DL4Q99706 377 aa10.44□□□□□ -0.74
SMN1-201ENST00000351205 KRTAP10-8P60410 259 aa10.43□□□□□ -0.74
SMN1-201ENST00000351205 SMAGPQ0VAQ4 97 aa10.43□□□□□ -0.74
SMN1-201ENST00000351205 Q6ZUT4 128 aa10.43□□□□□ -0.74
SMN1-201ENST00000351205 CAMK2N2Q96S95 79 aa10.43□□□□□ -0.74
SMN1-201ENST00000351205 NAT8BQ9UHF3 227 aa10.43□□□□□ -0.74
SMN1-201ENST00000351205 RNF213Q63HN8 5207 aa10.43□□□□□ -0.74
SMN1-201ENST00000351205 A0A1W2PNN7 141 aa10.42□□□□□ -0.74
SMN1-201ENST00000351205 MRPL51Q4U2R6 128 aaKnown RBP10.42□□□□□ -0.74
SMN1-201ENST00000351205 C5orf38Q86SI9 138 aa10.42□□□□□ -0.74
SMN1-201ENST00000351205 PPP1R2P9O14990 202 aa10.41□□□□□ -0.74
SMN1-201ENST00000351205 APOMO95445 188 aa10.41□□□□□ -0.74
SMN1-201ENST00000351205 RPL23P62829 140 aaKnown RBP10.41□□□□□ -0.74
SMN1-201ENST00000351205 TMEM241Q24JQ0 296 aa10.41□□□□□ -0.74
SMN1-201ENST00000351205 FAM104BQ5XKR9 115 aa10.41□□□□□ -0.74
SMN1-201ENST00000351205 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.4□□□□□ -0.74
SMN1-201ENST00000351205 C2orf48Q96LS8 159 aa10.4□□□□□ -0.74
SMN1-201ENST00000351205 TIMM21Q9BVV7 248 aa10.4□□□□□ -0.74
SMN1-201ENST00000351205 RPL18AQ02543 176 aaKnown RBP10.39□□□□□ -0.75
SMN1-201ENST00000351205 SPAG11BQ08648 103 aa10.39□□□□□ -0.75
SMN1-201ENST00000351205 ADIRFQ15847 76 aa10.39□□□□□ -0.75
SMN1-201ENST00000351205 FAM74A3Q4VXF1 159 aa10.39□□□□□ -0.75
SMN1-201ENST00000351205 TMEM18Q96B42 140 aa10.39□□□□□ -0.75
SMN1-201ENST00000351205 RPL39P62891 51 aaKnown RBP10.38□□□□□ -0.75
SMN1-201ENST00000351205 C9orf116Q5BN46 136 aaPredicted RBP10.38□□□□□ -0.75
SMN1-201ENST00000351205 C20orf78Q9BR46 151 aa10.38□□□□□ -0.75
SMN1-201ENST00000351205 TRBV24-1A0A075B6N3 115 aa10.37□□□□□ -0.75
SMN1-201ENST00000351205 SMIM27A0A1W2PRY6 76 aa10.37□□□□□ -0.75
SMN1-201ENST00000351205 LINC00862A6NCI5 91 aa10.37□□□□□ -0.75
SMN1-201ENST00000351205 C9JQL5 133 aa10.37□□□□□ -0.75
SMN1-201ENST00000351205 CKS2P33552 79 aa10.37□□□□□ -0.75
SMN1-201ENST00000351205 RPL32P62910 135 aaKnown RBP10.37□□□□□ -0.75
SMN1-201ENST00000351205 FAM104AQ969W3 186 aa10.37□□□□□ -0.75
SMN1-201ENST00000351205 OPRPNQ99935 248 aaPredicted RBP10.37□□□□□ -0.75
SMN1-201ENST00000351205 NAT8Q9UHE5 227 aa10.37□□□□□ -0.75
SMN1-201ENST00000351205 PSORS1C2Q9UIG4 136 aa10.37□□□□□ -0.75
SMN1-201ENST00000351205 TNFRSF6BO95407 300 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms