RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 CT83Q5H943 113 aa8.2□□□□□ -1.1
NECTIN1-203ENST00000341398 REG3GQ6UW15 175 aa8.2□□□□□ -1.1
NECTIN1-203ENST00000341398 CARD19Q96LW7 228 aa8.2□□□□□ -1.1
NECTIN1-203ENST00000341398 ESDP10768 282 aa8.19□□□□□ -1.1
NECTIN1-203ENST00000341398 CEBPGP53567 150 aa8.19□□□□□ -1.1
NECTIN1-203ENST00000341398 CD164L2Q6UWJ8 174 aa8.19□□□□□ -1.1
NECTIN1-203ENST00000341398 SPINK6Q6UWN8 80 aa8.19□□□□□ -1.1
NECTIN1-203ENST00000341398 ISOC2Q96AB3 205 aa8.19□□□□□ -1.1
NECTIN1-203ENST00000341398 A0A1B0GUT8 65 aa8.18□□□□□ -1.1
NECTIN1-203ENST00000341398 SYCNQ0VAF6 134 aa8.18□□□□□ -1.1
NECTIN1-203ENST00000341398 MRPL52Q86TS9 123 aaKnown RBP8.18□□□□□ -1.1
NECTIN1-203ENST00000341398 ZNF664Q8N3J9 261 aa8.18□□□□□ -1.1
NECTIN1-203ENST00000341398 TMEM191AQ9H0A3 160 aa8.18□□□□□ -1.1
NECTIN1-203ENST00000341398 CDC42SE2Q9NRR3 84 aa8.18□□□□□ -1.1
NECTIN1-203ENST00000341398 C7orf77A4D0Y5 90 aa8.17□□□□□ -1.1
NECTIN1-203ENST00000341398 PPP1R17O96001 155 aa8.17□□□□□ -1.1
NECTIN1-203ENST00000341398 TSHBP01222 138 aa8.17□□□□□ -1.1
NECTIN1-203ENST00000341398 MALP21145 153 aa8.17□□□□□ -1.1
NECTIN1-203ENST00000341398 Q6ZRP5 223 aa8.17□□□□□ -1.1
NECTIN1-203ENST00000341398 TMEM242Q9NWH2 141 aa8.17□□□□□ -1.1
NECTIN1-203ENST00000341398 TRBV27A0A0K0K1C4 114 aa8.16□□□□□ -1.1
NECTIN1-203ENST00000341398 HIGD1CA8MV81 97 aa8.16□□□□□ -1.1
NECTIN1-203ENST00000341398 C1orf196B1AJZ1 125 aa8.16□□□□□ -1.1
NECTIN1-203ENST00000341398 VCYO14598 125 aa8.16□□□□□ -1.1
NECTIN1-203ENST00000341398 FCER1GP30273 86 aa8.16□□□□□ -1.1
NECTIN1-203ENST00000341398 POLR2KP53803 58 aaKnown RBP8.16□□□□□ -1.1
NECTIN1-203ENST00000341398 TSKUQ8WUA8 353 aa8.16□□□□□ -1.1
NECTIN1-203ENST00000341398 LINC00526Q96FQ7 95 aa8.16□□□□□ -1.1
NECTIN1-203ENST00000341398 EIF5A2Q9GZV4 153 aaKnown RBP8.16□□□□□ -1.1
NECTIN1-203ENST00000341398 A0A0J9YXV3 536 aa8.15□□□□□ -1.1
NECTIN1-203ENST00000341398 LOC107984640A0A0U1RRK4 108 aa8.15□□□□□ -1.1
NECTIN1-203ENST00000341398 RAB4AP20338 218 aa8.15□□□□□ -1.1
NECTIN1-203ENST00000341398 CAMPP49913 170 aa8.15□□□□□ -1.1
NECTIN1-203ENST00000341398 SMIM7Q9BQ49 75 aa8.15□□□□□ -1.1
NECTIN1-203ENST00000341398 TNXBP22105 4242 aa8.14□□□□□ -1.11
NECTIN1-203ENST00000341398 COX7A2LO14548 114 aa8.14□□□□□ -1.11
NECTIN1-203ENST00000341398 RIGQ13278 110 aa8.14□□□□□ -1.11
NECTIN1-203ENST00000341398 ALKAL2Q6UX46 152 aa8.14□□□□□ -1.11
NECTIN1-203ENST00000341398 TMEM18Q96B42 140 aa8.14□□□□□ -1.11
NECTIN1-203ENST00000341398 KIR2DL4Q99706 377 aa8.14□□□□□ -1.11
NECTIN1-203ENST00000341398 OSTCQ9NRP0 149 aa8.14□□□□□ -1.11
NECTIN1-203ENST00000341398 CSDC2Q9Y534 153 aaKnown RBP8.14□□□□□ -1.11
NECTIN1-203ENST00000341398 IGLV4-69A0A075B6H9 119 aa8.13□□□□□ -1.11
NECTIN1-203ENST00000341398 APOMO95445 188 aa8.13□□□□□ -1.11
NECTIN1-203ENST00000341398 PTTG1IPP53801 180 aa8.13□□□□□ -1.11
NECTIN1-203ENST00000341398 GAGE2BQ13066 116 aa8.13□□□□□ -1.11
NECTIN1-203ENST00000341398 ZNF727A8MUV8 499 aa8.12□□□□□ -1.11
NECTIN1-203ENST00000341398 PPP1R2P9O14990 202 aa8.12□□□□□ -1.11
NECTIN1-203ENST00000341398 GAS8-AS1O95177 125 aa8.12□□□□□ -1.11
NECTIN1-203ENST00000341398 LINC01551Q86U37 167 aa8.12□□□□□ -1.11
NECTIN1-203ENST00000341398 AMN1Q8IY45 258 aa8.12□□□□□ -1.11
NECTIN1-203ENST00000341398 CAMK2N2Q96S95 79 aa8.12□□□□□ -1.11
NECTIN1-203ENST00000341398 SUMO2P61956 95 aaKnown RBP8.11□□□□□ -1.11
NECTIN1-203ENST00000341398 SRSF9Q13242 221 aaKnown RBP eCLIP8.11□□□□□ -1.11
NECTIN1-203ENST00000341398 LRP2P98164 4655 aa8.11□□□□□ -1.11
NECTIN1-203ENST00000341398 TCAPO15273 167 aa8.1□□□□□ -1.11
NECTIN1-203ENST00000341398 KRTAP10-8P60410 259 aa8.1□□□□□ -1.11
NECTIN1-203ENST00000341398 AKAP14Q86UN6 197 aa8.1□□□□□ -1.11
NECTIN1-203ENST00000341398 C2orf48Q96LS8 159 aa8.1□□□□□ -1.11
NECTIN1-203ENST00000341398 TRAV13-1A0A0B4J241 112 aa8.1□□□□□ -1.11
NECTIN1-203ENST00000341398 NUP35Q8NFH5 326 aa8.1□□□□□ -1.11
NECTIN1-203ENST00000341398 UBE2D4Q9Y2X8 147 aa8.1□□□□□ -1.11
NECTIN1-203ENST00000341398 SMKR1H3BMG3 65 aa8.09□□□□□ -1.12
NECTIN1-203ENST00000341398 MT-ND6P03923 174 aa8.09□□□□□ -1.12
NECTIN1-203ENST00000341398 TIMM21Q9BVV7 248 aa8.09□□□□□ -1.12
NECTIN1-203ENST00000341398 NAT8BQ9UHF3 227 aa8.09□□□□□ -1.12
NECTIN1-203ENST00000341398 LINC00862A6NCI5 91 aa8.08□□□□□ -1.12
NECTIN1-203ENST00000341398 RPL18AQ02543 176 aaKnown RBP8.08□□□□□ -1.12
NECTIN1-203ENST00000341398 TMEM241Q24JQ0 296 aa8.08□□□□□ -1.12
NECTIN1-203ENST00000341398 RNF151Q2KHN1 245 aa8.08□□□□□ -1.12
NECTIN1-203ENST00000341398 FAM74A3Q4VXF1 159 aa8.08□□□□□ -1.12
NECTIN1-203ENST00000341398 C5orf38Q86SI9 138 aa8.08□□□□□ -1.12
NECTIN1-203ENST00000341398 V9GYV3 84 aa8.08□□□□□ -1.12
NECTIN1-203ENST00000341398 F8WDY8 70 aa8.07□□□□□ -1.12
NECTIN1-203ENST00000341398 SRP19P09132 144 aaKnown RBP8.07□□□□□ -1.12
NECTIN1-203ENST00000341398 C9orf116Q5BN46 136 aaPredicted RBP8.07□□□□□ -1.12
NECTIN1-203ENST00000341398 RNASE13Q5GAN3 156 aaKnown RBP8.07□□□□□ -1.12
NECTIN1-203ENST00000341398 FAM104BQ5XKR9 115 aa8.07□□□□□ -1.12
NECTIN1-203ENST00000341398 NRACQ8N912 160 aa8.07□□□□□ -1.12
NECTIN1-203ENST00000341398 OR10D4PQ8NGN7 298 aa8.07□□□□□ -1.12
NECTIN1-203ENST00000341398 C20orf78Q9BR46 151 aa8.07□□□□□ -1.12
NECTIN1-203ENST00000341398 A0A1B0GW15 77 aa8.06□□□□□ -1.12
NECTIN1-203ENST00000341398 A0A1W2PNN7 141 aa8.06□□□□□ -1.12
NECTIN1-203ENST00000341398 CKS2P33552 79 aa8.06□□□□□ -1.12
NECTIN1-203ENST00000341398 SPAG11BQ08648 103 aa8.06□□□□□ -1.12
NECTIN1-203ENST00000341398 IMMP2LQ96T52 175 aa8.06□□□□□ -1.12
NECTIN1-203ENST00000341398 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.05□□□□□ -1.12
NECTIN1-203ENST00000341398 MRPL51Q4U2R6 128 aaKnown RBP8.05□□□□□ -1.12
NECTIN1-203ENST00000341398 PSORS1C2Q9UIG4 136 aa8.05□□□□□ -1.12
NECTIN1-203ENST00000341398 TRBV24-1A0A075B6N3 115 aa8.04□□□□□ -1.12
NECTIN1-203ENST00000341398 S100A8P05109 93 aa8.04□□□□□ -1.12
NECTIN1-203ENST00000341398 RPL32P62910 135 aaKnown RBP8.04□□□□□ -1.12
NECTIN1-203ENST00000341398 C1orf137Q5JT78 98 aa8.04□□□□□ -1.12
NECTIN1-203ENST00000341398 Q6ZUT4 128 aa8.04□□□□□ -1.12
NECTIN1-203ENST00000341398 OPRPNQ99935 248 aaPredicted RBP8.04□□□□□ -1.12
NECTIN1-203ENST00000341398 F8W036 122 aa8.03□□□□□ -1.12
NECTIN1-203ENST00000341398 NDUFA1O15239 70 aa8.03□□□□□ -1.12
NECTIN1-203ENST00000341398 RPL23P62829 140 aaKnown RBP8.03□□□□□ -1.12
NECTIN1-203ENST00000341398 ODF1Q14990 250 aa8.03□□□□□ -1.12
NECTIN1-203ENST00000341398 ADIRFQ15847 76 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms